Entry information : ZmaAPx02 ( Zosma21g01150 [2.2])
Entry ID 12567
Creation 2013-11-05 (Qiang Li)
Last sequence changes 2016-04-11 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-04-11 (Achraf Jemmat)
Peroxidase information: ZmaAPx02 ( Zosma21g01150 [2.2])
Name (synonym) ZmaAPx02 ( Zosma21g01150 [2.2])
Class Ascorbate peroxidase    [Orthogroup: APx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Zosteraceae Zostera
Organism Zostera marina    [TaxId: 29655 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmaAPx02
start..stop
S start..stop
PnodAPx13 501 0 1..285 1..286
PnodAPx15 493 6.56e-179 1..283 1..284
ZaAPx02 444 2.71e-159 5..284 4..286
LsaAPx02 442 1.18e-158 5..284 4..283
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12567' 'join(959056..959171,959275..959399,960185..960234,961200..961265,961385..961433,961752..961834,961942..962021,962142..962244,962316..962504)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 959056..959171 114 N° 2 959275..959399 123 N° 3 960185..960234 48 N° 4 961200..961265 64
N° 5 961385..961433 47 N° 6 961752..961834 81 N° 7 961942..962021 78 N° 8 962142..962244 101
N° 9 962316..962504 187  
join(959056..959171,959275..959399,960185..960234,961200..961265,961385..961433, 961752..961834,961942..962021,962142..962244,962316..962504)


exon

Literature and cross-references ZmaAPx02 ( Zosma21g01150 [2.2])
DNA ref. Phytozome 12:   scaffold_21 (959056..962504)
Cluster/Prediction ref. Phytozome Gene 12:   33168903
Protein sequence: ZmaAPx02 ( Zosma21g01150 [2.2])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   286 (303)
PWM (Da):   %s   31662.37 (32599.5) Transmb domain:   %s   o257-279i
PI (pH):   %s   8 (8.90) Peptide Signal:   %s   cut: 31 range:31-333
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPPPVVDVEYRKEIEKARRDLRAVISSKNCAPIMLRLAWHDAGTFDVKTKIGGPNGSIRNKEELNHAANSGLKFSIDLCEIVKAKHPKITYADLYQLAGVVAVEVTGGPTIEFVPGRKD
SLVSPREGNLPDAKQGTEHLREIFYRMGLSDKDIVALSGAHTLGRAHQERSGFEGPWTKEPLKFDNTYFVELLEGEKKGLLKLPTDNTLLHDPAFRGYVELYAKDEDAFFRDYTVSHKKL
SELGCFAPTSNKADSNGFLVHSAFGVAVTAAVVILSYCFEVSRKKM*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCCCCCCCCAGTAGTTGACGTGGAGTATCGCAAAGAGATCGAGAAGGCCAGGAGAGATCTCCGTGCTGTAATCTCTAGCAAGAACTGTGCCCCCATCATGCTCCGCCTCGCGCGT
ATGTTCTTCTGTTCAGTCCCCATTCACTGTTCCCATCAGTCCTTCTGATCTCTTGCTTTGGAGTTTTCTTCTTTCTTTTTTATGTTCGATCCCTTTTGCAGGTGGCATGATGCCGGGACA
TTCGATGTCAAGACAAAGATAGGTGGACCAAATGGTTCGATCAGAAACAAAGAGGAGTTGAATCATGCTGCCAATTCTGGACTGAAGTTTTCGATTGATCTTTGCG
CGGTGAGCTATGGC
CGATTTTTTTTTCATACTAAAATACTCATATTAGGTCGAAAGGGACTAACTGTACATGTATTATTGTGTTGTAATGCTTGAAATTCCTTTTTCATAGCATTCTTTCTTCCATTTATTATC
TTTATCTTTAGAGGCTTGTTCTATAACAAGCTAATTCTATTTCAACATTTATCTTTTAGATAATCTTTCAAATTTCACTCAAGATCAAAGCACATCAGGCCCAAATACCGCTTCATCAGG
GACCTGATTGAAAAAGGAAGATTTGGACCTGAGAAAAATAACTGAAGATTAGAATGCTGCAAATATGCTTACCAAAACGACGAACATGGAAAAGCTAAGGCTATGCATAACCTTAGTGGG
CCTTCTTGATTGCTGCTAAACATGGAGAGGGTGTGATGGTGGTCAACATTTGTTGATTATTGATGTTTATATAATAGAGTGGAGACTGCTTATTTAATTGGTATCCTTATTGGGCCAATT
ATAGTCATTATATGAGTCAAATCTAAGATGATTATACTTTCTCTATGTAGATAGCTATGTAGTTACTGAAAACAGTGAGTCAATAACATTTGTAATAGCTAGCCACCACCAATTTTAATG
TGGCCACCAGATAACTAACAGAATGAACCCACTGGAATCCTTGTAGAAAATATGTGTTTATTACTTTTGTAGAACTGGTTGAGAATTGAGAGCATGTTTTTGTCTATCACAGTCATTACT
CCATCCAAATACAAAAATACTGACTAATTTCTTTATGTTTAATCACTCATCAGAGATTGTCAAGGCAAAGCATCCTAAAATTACATACGCAGATTTATATCAGAGGTAGAAAATTTATCA
TTTCATAGTTTCTTTAACTTTTAACTCATATTATGACACTTTTTAAATGCTATTTATTTATTTTACTATTAAGTAGATCTCTGTTTTGATTAGAATTATTAAAATGAGTATATTAAATAG
TATGAAATTTATCATCTATTGAAATGTGACAAACAGAATTTTATCTTGATGATCCTTCTAAAAAAACTTGGGAAACAGATGATCATTATAAATTTTATTTTTACCAAAAATAACTTTTAA
ACAATATTGGATGTAATCTTATTTTTGATAGCCTAATAAGATAATCACAAATCATGAATAGCAGGTTGAAGTATAGGATAATGAGATAATCTATATATTAAAGAATCCCTATAAATTAAC
TTCAAAACAGCGGAATGAAGAGGAAAGATACCAAATCTCCAATAGAAAAATCTGGTAAAATCTATGACATGAAGTCTCAATGGGAAACCTTATCACAATCTTTGACACTGTAAAAACAGT
TGTTAACATTTTCTTATTTTCCTAGAAAGCTTCTGCAATGATAGATTCCTAAAAGTATCCTGGTGTCAGTTTTTAAGAATACGACTTTCTAATTTCCATAAATCACAATTCAAAAACAAA
TACAATCTTAGTCTATAGTTGAAAAATAAAATCTTTACTCCATATGTGATTTGACAACTTTAAGAAATCATGCTGGCTCATCGATATATAAATCCAAAACACTGCATGATTTCTTATTGT
TGTGATATCTATACTTGTGAGAAAAAAGAAACTATCTTTTGAAAAGTTTAGTTTGTGAAATGTAAAAACACTCTCAACTTACGTTATGGATAATATCCCTCTTTTTACTTTTGTTCATAT
TTGAAATTATGATGGTCATTTGCTTCTATTTGGTTGTAGATACCTGTATTGATTGATAGTTTGTAGTAAGAAAATAATATAAACGTTATTTAAAATGTTCTAATTTTCAGCTTGCTGGAG
TTGTCGCTGTTGAGGTCACTGGGGGTCCAACAATTGAATTTGTTCCAGGAAGAAAG
AGGTGGGCTATCTTCTAGGATTTTATTTCCATCATATAAACCGATGGTACAATGTTTTATATCC
TTTACAGTGATAATTATTCAATTATAGCTAATTGGGGCCCTTTTGTTTTCCTATCAGGATTCTTTAGTTTCACCTAGGGAGGGAAATCTTCCTGATGCTAAACAAGAGGTATGTGGAATT
GTGTATTGTATTTTGGTGTAATTGATTAATGGTAGTTGTTATGATTTTTGTTATAACCACAAATCTTTCATAAATCATAACTTATGTTTAGCCTGAATACTTATTTTTATCATGTGATCC
TATTGTAAATGCACTTTTCTACATCAGTGTGAACTGTGAAAACTTGCTTGCTGCTGTATTTACTTTCAGACACTCCCTTTATTGTTTTTTAACATTATATTTCTTAAAATTTTTTACAAC
ATTTCCCTAAGCATGTCTAAACCTTATTATTGTATAGGTTAATTAATAAATGTATTATTATTATAGGCACTGAACATCTGAGAGAAATATTTTACCGAATGGGTCTGTCAGACAAGGATA
TTGTTGCATTATCCGGTGCCCACACTTTG
TGGTAGTTGTTTCAAAGAATTTTTTTCATGGATTTCTAGATTCAAACTGGTATTTTAACTTTTAATCAATATTGTTGCATTTTTTCCCGAC
ACATTTTTGTATGTAAAGGGGAGAGCGCATCAGGAAAGGTCTGGTTTCGAAGGTCCTTGGACAAAGGAACCTCTGAAGTTTGACAATACATACTTTGTGTGTAAGATCAATACAAAACTC
TGATAATTGTTTAATATGTTTAAACTTCAGACAGAGGATTTGACTTAAAATGCCCAATTGGGGTTCCTTACTACAAAATGGTCATTATTTCTTCTCATAGGGAACTGCTGGAAGGAGAAA
AGAAAGGACTTTTAAAGCTACCAACGGACAATACTTTACTGCATGATCCTGCATTCCGTGGTTATGTTGAACTGTATGCAAAG
AGGTACTTGAATAAAATAGCTTATGTTTTTGGAAATT
AAAAACTAAACATATTTGTGGTTTAACACAACACAGGATGAAGATGCATTTTTTAGGGATTATACCGTATCCCATAAGAAGCTCTCTGAACTTGGCTGCTTTGCTCCGACATCCAACAAA
GCAGATTCAAATGGTTTTTTGGTTCATAGTGCTTTTGGAGTTGCCGTTACTGCTGCTGTGGTGATACTGAGTTACTGTTTTGAGGTTTCAAGGAAAAAAATGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCCCCCCCCAGTAGTTGACGTGGAGTATCGCAAAGAGATCGAGAAGGCCAGGAGAGATCTCCGTGCTGTAATCTCTAGCAAGAACTGTGCCCCCATCATGCTCCGCCTCGCGTGG
CATGATGCCGGGACATTCGATGTCAAGACAAAGATAGGTGGACCAAATGGTTCGATCAGAAACAAAGAGGAGTTGAATCATGCTGCCAATTCTGGACTGAAGTTTTCGATTGATCTTTGC
G
AGATTGTCAAGGCAAAGCATCCTAAAATTACATACGCAGATTTATATCAGCTTGCTGGAGTTGTCGCTGTTGAGGTCACTGGGGGTCCAACAATTGAATTTGTTCCAGGAAGAAAGGAT
TCTTTAGTTTCACCTAGGGAGGGAAATCTTCCTGATGCTAAACAAG
GCACTGAACATCTGAGAGAAATATTTTACCGAATGGGTCTGTCAGACAAGGATATTGTTGCATTATCCGGTGCC
CACACTTTG
GGGAGAGCGCATCAGGAAAGGTCTGGTTTCGAAGGTCCTTGGACAAAGGAACCTCTGAAGTTTGACAATACATACTTTGTGGAACTGCTGGAAGGAGAAAAGAAAGGACTT
TTAAAGCTACCAACGGACAATACTTTACTGCATGATCCTGCATTCCGTGGTTATGTTGAACTGTATGCAAAG
GATGAAGATGCATTTTTTAGGGATTATACCGTATCCCATAAGAAGCTC
TCTGAACTTGGCTGCTTTGCTCCGACATCCAACAAAGCAGATTCAAATGGTTTTTTGGTTCATAGTGCTTTTGGAGTTGCCGTTACTGCTGCTGTGGTGATACTGAGTTACTGTTTTGAG
GTTTCAAGGAAAAAAATGTGA

Retrieve as FASTA