Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
334 |
PWM (Da): |
37235.35 |
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PI (pH):
| 10.11 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGSESKPSYFLALRTLDTQHHSKILRNRDTRLWKNHFVQDRMKACPQLENLVNRAFEAQWKKDRSVSPAILRLFFHDALVNGVDGSILLNGTGTNLAEKDNPDVKHLRGFDALERVKATVEASCPRKISCADTLTLMTKFAVIKSGGPEIDFNLGRLDGFSSNLELAKLLTPRHFSTATALLNIFFLLGLSQVDLVALSGAHTIGVAHCESVRTRIYPTIDTKYEPQFGISVRKSCPIVDPSQNPPLLDPNATLKLDQTSTVFDNSYFQGLRSNRGLMTSDNNLNADPRLNSQVAKFASNQSAFFNQFRLSMKKLSEINLRSVGNVRRKCYKLN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Sequenced by EEP in LRSV. Containing motif fhda. Missing 'c'. Containing IntR (5'). Containing IntR (3'). |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGATGCCATT TCACCTTGGG ATGGCCCTGT GTTAAACCAC AAAATTTAAA CCGAGAAGAA TCCATGTCAT GAAATGTGCC TCTACAATTA AAAACGGGAT GTCATTCAAT TCAACAGAAG
TGCATTTGTT CTAAAATTCC CACATTTCCA TCAATCTCTT GTCCATTTAG AACTAGATTA GGGGTTTCCC CTATTCACCT GAACCTTGTT TAATAGCAAA TATCAATTGG ATTTGTGAAA
GCAAATTGAG ATCTGTACAT AGCTACCTCA AGGGTTCTCA AGGGTCTGAA TAGCCCATGA ATGTCAAACC AAACAGTAAT TATCCACGGG TGTTCAGGAC TAGGAAGCTG TGTCAAGGAA
AGTAGGTTAA TAAACAAATG CCTATATGTC AGATACGGTT TAAAATTCCA GTGTAAGGTC TCGGACCTAC CAGGTGGTGG GGAATGTGCT TAAGCAATTC AGGTCAAACT CAACCGATCT
AAGTCAGATA GTCTCCCAGG ACCTACGACT CCTTAGTCTA AGACTCAAAG GAAGGACCAC GGAGATACCT AGTGAAACCC AAAGAAAGAA GGGCACATCT ACCGACTAGG TATGCACAAA
TTTTCTAAGT TGATTAATAT AATACCGAAT TACCTGGCTG TGGACATGTT ACCCACTCCG TGATATGACA AGGCCAGGTT CCAAGTGTTC AGAAAGGATA AAGAAAAACT GGTGTCGTAT
TCGTAGTAGG AAAAAAATTC TAAGATGGGA TAGAAAATCA AGTGTAATGG AAAGAGGAGT AAAATTGTAA GAACGGTAGA AAGAATAGGA ATACGAATAC AAGTTTAAAT ATAGAAGGAA
TTGAACAGAA GCTATGTAGA ATATGTTCTA AACAATTGGA TGATACAGTG AAAGCAGAGG TTACATACTA CGTTTGGAAT CGAAGAAAAA GGAAGATAAG AAGAAAAAAA ATAGTCTGAT
GGATTGAAGG GTGATTTAAT CCATTTTTTT TAGGGTGTCA AATGATTTAA TAACTAAAAT GGAAGACGAA AAGAGTTTGA AAGTCAAGTT AGGATTGGGT GATACAAAGT GATATGCTTA
TACAATTTGC AATGCGTATT TTGTAAACAC TACATAGAAA TCAGAAAAAA TTTACCTTAT TTCAAACCAT GGTCAATCTT TATCACCCAT CACTGCCTCA TTAAAATTTT TGGTTTCCCA
TGTGCTCGTG AAACGCCACA CATTAACACA ATTTATCAGA GCTGAAATTC AAATCGGAAA TAGATGT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTAGCGAATCCAAACCTTCATATTTTCTGGCACTTCGCACACTTGATACCCAACACCATTCGAAAATTCTCCGTAATCGTGATACAAGATTGTGGAAGAATCATTTCGTACAAGAT AGGATGGTAAGCTCTCGTCGATTTTCCGAACTGTGAGGGAGCTGTTTCCCATAGACTCGAAAGTTTTCCAAGCACGAATGAATGATGCTTTGGGAGTAATTCTCACGTATCTTTACAAAG AATTGCAAATGACATCCACAAGAAGAAAGACAAATATGATATAGAAAGACGATTAAGCGCAATATGGCTGGGTTGTTAATGGTGAATGATATCCAAACATGAGATTTAAATTACAAAAAA ATAAAGTAAAAAGAGAAGCCAAGTTAAAAGAATAAGAAAAAGTGTAAAAGAAAATGGGAAGGAGATTTGAAATAGTATAATTTCTAATAACTCGCAAGTCATAGTACATCGAAATCGGAT TGACCACCTATTTCCCGTTGTTATGCCCAGACCAAACACAAACTTGTTATGTCCAAGGTTAAGGTGCGGTTAAGATATTTTGCATCGGTAAGCAAGCAGAGGATACTCCATCTATTATAT CCGATTCCACTACACATTCTTAAATGGAGTCATACCCGGCCTTGCTTTTCTTCATGAACTCCCATGTGCAAAGTTTGCGATTAAAGTATCTACGAAACTCCCGCCCCTGTTCAAGTGCTG TTCGAATTCCATAGGCAGTTCAACCCTCTACGCGAATCACCCCCCACCCCAAACGCTTCTCTCCAAAATTGAATGACGCGTACTTAAACCTCCCAGAGGGAATCACCCCATTTCAAATCG AGGTGGATGGAATTTCACTTTTGGTAGATGATTTGATCATCCATTGAAATCATACATACAATTCAAAAATCCGGGTCATACATACGATTCAGAATTGAATATGGCTCAAGAAAAAATGAA AGAATGGAGAAAGAAAACATTGTATCAATCGGAATCCTAATACGTTTGTCGTTTTGTGGAATCGGACTCCGACTTTTTATGCGATGAATGAGTCAATGAATCTTTGGAAGCTGATATCCG GCAAATAACCTTGGCTCTTGGAGTTCCTGGGGCAGTTACTGAAATCGGTAACACAAGGAGAAAAATAAAAGGGCGAGATGGAACTTCGAAAGTTGGTGCGGTTTTACCTAAATTTGAATA GTCGGTATGCGTGCGGGTTTATCCTAGTTTTGGACAACTGGGTAACAATCGTATTCAGTTACAACATCAACCAATCAGAGGAATACAAAATCGAATCATTGACTAATGAATTCCAAGGAT TCAACCGACACATGATTAATCTTTGTGGGTCATGCATGGGCAGGCCTATTTTTTTGGAAAATAGTAATTCTTTGGAAAATAATGTAGTAAAAATAGTCATTTTCCCTTAAACACTAGAAT TACTGGAAACCTTGAAAATTTTGCCTATTACCAGAATACCCTAACCTAGTTTAGCGTTTTAAACAATCATTTTTGCCGTACAATTTTTTTCTGTAAAACAGTCATTTTTTTCGGATCAAA AATAGTAAAAATAGTCATTTATTTCGAAAATGACTGATTCTAGGAGGCCTGGTCCAAGTCCAAGTGAAGTCATCCTTGGAAATTTTGACTAATTCACTTTTTCTAGTTTGACCGTGTTAA CCATTTTCCTAGGATAGCTACCGCTTATATGCATGCAGTGTTTCGTTAATTCAACTTTTCGATTTTACGCCCAACAGAATCTCAATAGAGTAAATGCCTTGCATTTGAATTAAAAAAAAA AACAAATATAGAAGCAAGACTGGAATTCTTTGCTTGACTTGATGAATAAACTTCGAATTTATCCACTTGCAATTTTTCATTTGGATTGGATGCATCTAACTCGAGGTGAATATCAGTAGT CCGAGGTGATACTATTTTGTAATATTTATCATTCTAATTGATTATATCCCCAACCACAACAAAAATAACAACTGAGTACTGATTTTGAACTACAAATCTGGATTTCTCTATGAAGGTTTT GATGTAGGGTTCGCAAGGAGTACGGGATGTTCACAAACATTTGACAATTACTCCGTTTCCAAACGAGAGAGGTTGGCTTCAACTTCTTTGACTGGTTATTGACTTCACTTCCGAGGAAAT GTCCTCTATTACCCAAAATCTCTTCGTCTCCCAAACATCTTGAAGGGGGACATTGTAAGCTAACGTGGAAGAGGGCTACCCGAATTTGGAGTGTTTGGGGATGTTGGATGGCATGCGGTT GCCGAATATTAAGCGACCCATGGATGCATCCGACTGCGGTTGCTTTTTTCTCCATGGAGTGGTTTCTTGTTTTTCATGTGAATTATGTGGGAACGAAAGCATTTTTCTTGAGGAAGTACT CGCGAGAAATTCTACTCGCCCTTGTTTTTTTCTCCATTGGAATTGATTTTGCTGATTGTCAGGGTCGTGTGTTGTCTAGAGACTTTTACAAGGTACGTGAGTTTATTCCAATCGGATGCT CAATTGATCATTGTAATCAATGAATTTGTGGGTATTTTCAGCTGTTGCCTGATTTTTTTTGGAATGTGTAGAAAGCATGTCCTCAATTGGAGAATTTGGTGAACCGCGCCTTCGAAGCTC AGTGGAAGAAAGATCGTTCAGTATCTCCAGCGATTCTAAGACTCTTTTTCCACGACGCGCTTGTGAATGTCCGTCTTGCATTCTCATTTTCTTTCTTTCTTGCACTTTCTTCACCATTGC ATGATTCATTGATATGTGAATTCCTCATTTTTACAATTCCCCCATTTTCAGGGAGTGGATGGATCGATTTTGCTCAACGGGACGGGAACCAACTTGGCTGAAAAAGATAATCCAGACGTG AAGCATTTACGTGGATTCGATGCGTTGGAACGTGTGAAAGCAACTGTTGAAGCTTCCTGTCCCAGGAAAATCTCGTGCGCGGACACTCTAACTCTGATGACTAAATTCGCAGTTATAAAG GTCTCTTTCTCTTTAGAATCATCTCCACGTTCCCATTAGCATCGTCATCTTACAACTTGAATCCGCAGTGAATAAGTGGCGAGTCTTAACCCTAACCCCGCAATTGCTATCCATTATTAT TTTTCTCTCCCGAACATACATGATCCTTCAGTCTGGAGGTCCTGAGATCGATTTTAACTTGGGGCGATTGGATGGATTTTCTTCAAATCTGGAGCTCGCAAAATTGCTTACCCCTCGCCA TTTTTCTACTGCGACAGCACTACTCAACATTTTTTTTCTTTTAGGCCTGAGTCAAGTTGACTTGGTTGCTCTCTCAGGTACAAATTTGAAATGCTAATCTACAACATGGATGGCCCGTTC CATTTTCGCTTACCAATCTGTTCCATTTCGTTGTCCAGTTGTGATGTACAAATGGTTGTCCATGTATGAATTGCATCATCTTACACACTGTGCCGTTCTTGCAAATCCGCTATCCCTTTA CTTTCCAATTTTCCCTCCTGAATCACCGGTGAGATTTTTTGAATCTAATTCTGTAGGCGCACACACCATTGGCGTCGCACATTGCGAGTCAGTTCGCACCCGCATTTATCCCACCATCGA TACAAAGTACGAACCTCAATTTGGAATCTCTGTGAGAAAAAGCTGCCCCATCGTGGACCCAAGCCAGAATCCTCCCCTTTTGGATCCCAACGCCACCCTAAAATTAGACCAAACGAGCAC GGTTTTTGACAACAGTTACTTTCAGGGATTGAGGTCGAACCGGGGATTAATGACTTCAGACAACAATTTGAATGCTGATCCCAGGTCGTTTTCTATCATCTTCAGCATTTGCACCCCCCA AATTCCCAATTCCATACCCTTCTCATTTTGTTCCTCGTGTCTAATTGTCTCCCTGTTAACACTTGCAATCATTCAGACTCAATTCCCAAGTGGCGAAGTTTGCATCCAATCAGTCTGCGT TTTTCAACCAATTTAGACTGAGCATGAAAAAGTTGAGCGAAATTAATTTGAGATCGGTGGGCAATGTCAGAAGAAAGTGTTACAAATTGAATTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTAGCGAATCCAAACCTTCATATTTTCTGGCACTTCGCACACTTGATACCCAACACCATTCGAAAATTCTCCGTAATCGTGATACAAGATTGTGGAAGAATCATTTCGTACAAGAT AGGATGAAAGCATGTCCTCAATTGGAGAATTTGGTGAACCGCGCCTTCGAAGCTCAGTGGAAGAAAGATCGTTCAGTATCTCCAGCGATTCTAAGACTCTTTTTCCACGACGCGCTTGTG AATGGAGTGGATGGATCGATTTTGCTCAACGGGACGGGAACCAACTTGGCTGAAAAAGATAATCCAGACGTGAAGCATTTACGTGGATTCGATGCGTTGGAACGTGTGAAAGCAACTGTT GAAGCTTCCTGTCCCAGGAAAATCTCGTGCGCGGACACTCTAACTCTGATGACTAAATTCGCAGTTATAAAGTCTGGAGGTCCTGAGATCGATTTTAACTTGGGGCGATTGGATGGATTT TCTTCAAATCTGGAGCTCGCAAAATTGCTTACCCCTCGCCATTTTTCTACTGCGACAGCACTACTCAACATTTTTTTTCTTTTAGGCCTGAGTCAAGTTGACTTGGTTGCTCTCTCAGGC GCACACACCATTGGCGTCGCACATTGCGAGTCAGTTCGCACCCGCATTTATCCCACCATCGATACAAAGTACGAACCTCAATTTGGAATCTCTGTGAGAAAAAGCTGCCCCATCGTGGAC CCAAGCCAGAATCCTCCCCTTTTGGATCCCAACGCCACCCTAAAATTAGACCAAACGAGCACGGTTTTTGACAACAGTTACTTTCAGGGATTGAGGTCGAACCGGGGATTAATGACTTCA GACAACAATTTGAATGCTGATCCCAGACTCAATTCCCAAGTGGCGAAGTTTGCATCCAATCAGTCTGCGTTTTTCAACCAATTTAGACTGAGCATGAAAAAGTTGAGCGAAATTAATTTG AGATCGGTGGGCAATGTCAGAAGAAAGTGTTACAAATTGAATTAA |
Retrieve as FASTA
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