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Entry information : BaLiP07
Entry ID 12586
Creation 2013-11-20 (Christophe Dunand)
Last sequence changes 2013-11-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-11-20 (Christophe Dunand)
Peroxidase information: BaLiP07
Name BaLiP07
Class Lignin peroxidase    [Orthogroup: LiP003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Meruliaceae Bjerkandera
Organism Bjerkandera adusta    [TaxId: 5331 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BaLiP07
start..stop		 S start..stop
BaLiP03_IFO5307 702 0 1..371 1..372
BaLiP03 701 0 1..371 1..372
BaLiP12 669 0 1..361 1..362
BaLiP05 645 0 1..371 1..372
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12586' 'complement(join(105739..105772,105828..105892,105953..106497,106552..106766,106819..106871,106926..107129))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 106926..107129 202 N° 2 106819..106871 51 N° 3 106552..106766 213 N° 4 105953..106497 543
N° 5 105828..105892 63 N° 6 105739..105772 32  
complement(join(105739..105772,105828..105892,105953..106497,106552..106766,1068 19..106871,106926..107129))


exon

Literature and cross-references BaLiP07
DNA ref. JGI genome:   scaffold_19 (107130..105739)
Protein sequence: BaLiP07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   371 (353)
PWM (Da):   %s   39473.65 (37617.6)  
PI (pH):   %s   4.65 (4.58) Peptide Signal:   %s   cut: 19 range:19-371
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKQLLATLSAVLVAQAAITKRVACPDGKNTAVNAACCSLFTAR
DDIQKNMFDGGQCNDIAHQAIRLTFHDAVAFSPALAQGKFGGNGADGSIMTFDTIETAFHPNIGLDEIVNIEKPFAKFHNMTPGDFIHFAGAIAVTNCAGAPTLSFSIGRPPVAPAPDGLVPEPFHTNDQIFARMLDALEFDD
LETVWGLIAHTVGASDDVDPTIPRTPFDSTPSLFDGQFFIDTQLRGVLFPGKVGIQGEVQSPLKGQIRLQSDHLIARDSRSACEWQSFADDHDKLTNRFQFVIETLAMVGQDPTNMIDCS
EVIPIPKDLTLAQLTPMFPAGKTHADVEQCADTAFPNFATRPGPAIAVPPVPSAKTGAPGS

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns). Incorrect prediction from JGI. FHD is missing due to frame shift (extra c) and bad prediction of intron 1.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGCAGCTCCTCGCTACCCTCTCCGCCGTCCTTGTGGCGCAGGCAGCGATCACAAAGCGCGTCGCCTGCCCCGATGGCAAGAACACTGCCGTCAACGCTGCATGCTGCAGC
TTGTTCACTGCCCGCGACGACATTCAGAAGAACATGTTCGACGGCGGCCAGTGCAACGACATTGCTCACCAGGCTATCCGACTGTGAGCTCCACTCAGATTTACGACAGCGGCGCATCGA
TGCTAACTGTGCTGCAGGACACCTTCCACGACGCCGTCGCGTTCTCCCCAGCTCTCGCCCAGGGCAAGTTCGGGTACGTGCCAACATATCATGATTATCTGCAGCATTCTAACCTTTACT
TGCAGTGTGGCAATGGCGCTGATGGGTCTATCATGACCTTCGACACCATCGAGACCGCCTTCCACCCCAACATCGGTCTCGACGAGATCGTCAACATCGAGAAGCCGTTCGCCAAGTTCC
ACAACATGACCCCCGGCGACTTCATCCACTTTGCAGGTGCCATCGCTGTCACGAACTGCGCCGGCGCGCCCACTCTAAGCTTCTCCATTGGTCGCCCCCCACGTACGCGATGATCCGCAC
CCACATGCTGAATATACTGACGTCTGCTCTTCTCAGCGCGGTTGCCCCCGCCCCCGACGGTCTCGTCCCCGAGCCGTTCCACACCAACGACCAGATCTTCGCCCGCATGCTCGACGCACT
CGAGTTTGACGACCTCGAGACCGTCTGGGGTCTCATCGCGCACACCGTCGGTGCCTCCGACGACGTCGACCCGACGATCCCGCGCACGCCCTTTGACTCGACGCCCTCGCTCTTCGACGG
CCAATTTTTCATCGACACGCAGCTCCGCGGCGTCCTGTTCCCCGGCAAAGTCGGCATCCAGGGCGAGGTGCAATCTCCGCTCAAGGGCCAGATTCGCCTCCAGTCCGACCACCTCATCGC
GCGCGACTCTCGCTCTGCTTGCGAGTGGCAGTCCTTCGCCGACGACCACGACAAGCTTACCAACCGATTCCAGTTCGTCATCGAGACCCTCGCGATGGTTGGCCAGGACCCGACCAACAT
GATCGACTGCTCAGAGGTTATCCCTATCCCCAAGGACCTGACCCTCGCCCAGCTCACCCCCATGTTCCCCGCTGGCAAGACCCACGCCGACGTCGAGCAGGCTGTATGTACCCCATGATT
CGCTCCTCACTGTGGCACAGAACGCTGATGACGAGTCCCATAGTGTGCGCCGACACCGCCTTCCCGAACTTTGCAACCCGCCCCGGCCCTGCTATCGCTGTTCCTCCTGTGTACGTCTCT
TTTCTAGCCCTTTGAGATACTGAATCTGACAGTCCCTTTCCACAGCCCCCCTCCGCAAAGACTGGAGCTCCCGGATCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGCAGCTCCTCGCTACCCTCTCCGCCGTCCTTGTGGCGCAGGCAGCGATCACAAAGCGCGTCGCCTGCCCCGATGGCAAGAACACTGCCGTCAACGCTGCATGCTGCAGC
TTGTTCACTGCCCGCGACGACATTCAGAAGAACATGTTCGACGGCGGCCAGTGCAACGACATTGCTCACCAGGCTATCCGACTGACCTTCCACGACGCCGTCGCGTTCTCCCCAGCTCTC
GCCCAGGGCAAGTTCGGTGGCAATGGCGCTGATGGGTCTATCATGACCTTCGACACCATCGAGACCGCCTTCCACCCCAACATCGGTCTCGACGAGATCGTCAACATCGAGAAGCCGTTC
GCCAAGTTCCACAACATGACCCCCGGCGACTTCATCCACTTTGCAGGTGCCATCGCTGTCACGAACTGCGCCGGCGCGCCCACTCTAAGCTTCTCCATTGGTCGCCCCCCACCGGTTGCC
CCCGCCCCCGACGGTCTCGTCCCCGAGCCGTTCCACACCAACGACCAGATCTTCGCCCGCATGCTCGACGCACTCGAGTTTGACGACCTCGAGACCGTCTGGGGTCTCATCGCGCACACC
GTCGGTGCCTCCGACGACGTCGACCCGACGATCCCGCGCACGCCCTTTGACTCGACGCCCTCGCTCTTCGACGGCCAATTTTTCATCGACACGCAGCTCCGCGGCGTCCTGTTCCCCGGC
AAAGTCGGCATCCAGGGCGAGGTGCAATCTCCGCTCAAGGGCCAGATTCGCCTCCAGTCCGACCACCTCATCGCGCGCGACTCTCGCTCTGCTTGCGAGTGGCAGTCCTTCGCCGACGAC
CACGACAAGCTTACCAACCGATTCCAGTTCGTCATCGAGACCCTCGCGATGGTTGGCCAGGACCCGACCAACATGATCGACTGCTCAGAGGTTATCCCTATCCCCAAGGACCTGACCCTC
GCCCAGCTCACCCCCATGTTCCCCGCTGGCAAGACCCACGCCGACGTCGAGCAGGCTTGCGCCGACACCGCCTTCCCGAACTTTGCAACCCGCCCCGGCCCTGCTATCGCTGTTCCTCCT
GTCCCCTCCGCAAAGACTGGAGCTCCCGGATCTTAA

Retrieve as FASTA