Entry information : PabPrx107(PAB00024148 / MA_147662g0020)
Entry ID 12649
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-13 (Christophe Dunand)
Peroxidase information: PabPrx107(PAB00024148 / MA_147662g0020)
Name PabPrx107(PAB00024148 / MA_147662g0020)
Class Class III peroxidase    [Orthogroup: Prx032]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx107
start..stop
S start..stop
PabPrx75 542 0 7..335 1..328
PtaPrx129 520 0 1..335 1..332
PabPrx59 519 0 7..334 1..327
PsiPrx04 499 1e-179 1..334 1..333
Literature and cross-references PabPrx107(PAB00024148 / MA_147662g0020)
Protein sequence: PabPrx107(PAB00024148 / MA_147662g0020)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (307)
PWM (Da):   %s   36617.42 (33507.8)  
PI (pH):   %s   7.66 (6.88) Peptide Signal:   %s   cut: 29 range:29-335
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MERGSTMATV LRICFVLALM TAWVTTRANP SGSLRPDYYI WSCPQAEAIV FSGVQRAVAQ EARMAGSLLR LHFHDCFVNG CDASVLLDDT STFVGEKTAA PNLNSTLGFK VIDAIKEELE  SACPGKVSCA DILAMAARDS VVMTRGPFWK VQLGRRDSLT ASKAAVDNSL PPPTSNISTL ISKFQDVGLT EKDLVTLSGA HTIGKARCAT FNSRFMGVRP GRYPTLETEF LTSLQQLCSE 
GLVINNNTVT VLDLKTPVTF DNQYYENLPS GEGLLESDQL LYINGGSTRK LVEFYIKNQD AFFMNFKTSM IKMGNNRPLT GTSGEIRHNC RFVNS 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction. Also found in another scaffold, (PAB00056105 / MA_8074461g001) with 9 mismatches.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAGGG GCTCTACCAT GGCTACTGTT CTGAGAATTT GCTTTGTTTT AGCGTTGATG ACTGCATGGG TAACCACGAG AGCAAACCCT AGTGGATCAT TAAGGCCCGA TTACTATATA  TGGAGTTGTC CACAGGCTGA AGCCATTGTT TTCTCTGGAG TTCAAAGGGC CGTAGCTCAG GAGGCACGCA TGGCTGGCTC TCTTCTTCGC CTGCATTTTC ATGACTGCTT TGTTAATGTA  AGTAACTCAA TCTATTTGCA GATTTTCATG ATTTCTGTTC AGAGTTATAT TGCTTTTCTT CCTGGAAATA TAAATTATCG TTGCCCTCCA AAGTTCTTGG TAAGTCTTGA ACACGATTAT  AACTACATAG AATTGATGAG AGTGAGTAAA ACAGTTACAA TAAAATGAAC ACAAATTTTC ATTAAATTGT AATGGATATT TTATGGATAA ATGGAAGTTA TGTGTAGGGA TGTGATGCTT  CAGTGCTGCT GGATGATACC AGTACATTTG TGGGAGAGAA GACAGCAGCT CCCAACCTCA ACTCTACCCT TGGTTTCAAA GTCATAGATG CCATCAAAGA AGAGCTTGAA TCTGCATGCC  CTGGAAAAGT TTCATGTGCT GATATTCTCG CAATGGCAGC ACGGGATTCT GTGGTCATGG TATAATTTTA TTGCTTTATT GCTGAAGTTT ATATGTGATA ATTGGCCATT TATCAGTTCA  GAGATTTAGG AAGATTATAG AGTAACATTG GAGAATTTTA TTTTTGTTAT GAGCAGACAC GAGGACCATT CTGGAAGGTG CAGTTGGGGA GGAGAGATAG CTTAACAGCA AGCAAAGCAG  CAGTAGATAA CAGCCTTCCA CCCCCCACAT CGAATATTTC AACACTCATC TCCAAGTTTC AAGATGTAGG CCTCACAGAA AAAGATCTGG TCACACTCTC AGGTTGTCCC ATCTATATAT  ATCCGTTTAT CTTTATAAGA TTCATCTGAA CACATGACAG GATGAAAAGT CTCAAGGGTA AACGTTGAAT AACCAGGCGT AAACAGATGA AAAGGGATAG GAACCCAGAA ATCTGATAAT  TTTTTCAAAA GGACTTGTTA TGGAGAGTTT TAGATATTAA GTGATTTATA TGTTTTGCAG GTGCCCATAC AATAGGAAAG GCACGTTGTG CAACATTCAA CTCTAGGTTC ATGGGAGTCA  GGCCTGGTCG ATATCCCACT CTTGAAACAG AGTTCCTAAC ATCGCTCCAA CAACTTTGCT CTGAAGGCCT TGTTATTAAT AACAACACCG TGACTGTACT AGATTTGAAG ACTCCGGTCA  CTTTTGACAA TCAGTATTAT GAGAATCTTC CTTCTGGCGA AGGCCTACTG GAATCAGACC AGTTGCTCTA TATCAATGGA GGAAGTACTA GGAAGTTGGT GGAATTTTAT ATCAAGAACC 
AAGATGCATT CTTTATGAAC TTCAAAACGT CCATGATCAA AATGGGAAAC AATCGACCGC TTACTGGGAC AAGTGGCGAG ATTCGTCACA ATTGTAGATT TGTTAATTCA TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAGGG GCTCTACCAT GGCTACTGTT CTGAGAATTT GCTTTGTTTT AGCGTTGATG ACTGCATGGG TAACCACGAG AGCAAACCCT AGTGGATCAT TAAGGCCCGA TTACTATATA  TGGAGTTGTC CACAGGCTGA AGCCATTGTT TTCTCTGGAG TTCAAAGGGC CGTAGCTCAG GAGGCACGCA TGGCTGGCTC TCTTCTTCGC CTGCATTTTC ATGACTGCTT TGTTAATGGA  TGTGATGCTT CAGTGCTGCT GGATGATACC AGTACATTTG TGGGAGAGAA GACAGCAGCT CCCAACCTCA ACTCTACCCT TGGTTTCAAA GTCATAGATG CCATCAAAGA AGAGCTTGAA  TCTGCATGCC CTGGAAAAGT TTCATGTGCT GATATTCTCG CAATGGCAGC ACGGGATTCT GTGGTCATGA CACGAGGACC ATTCTGGAAG GTGCAGTTGG GGAGGAGAGA TAGCTTAACA  GCAAGCAAAG CAGCAGTAGA TAACAGCCTT CCACCCCCCA CATCGAATAT TTCAACACTC ATCTCCAAGT TTCAAGATGT AGGCCTCACA GAAAAAGATC TGGTCACACT CTCAGGTGCC  CATACAATAG GAAAGGCACG TTGTGCAACA TTCAACTCTA GGTTCATGGG AGTCAGGCCT GGTCGATATC CCACTCTTGA AACAGAGTTC CTAACATCGC TCCAACAACT TTGCTCTGAA  GGCCTTGTTA TTAATAACAA CACCGTGACT GTACTAGATT TGAAGACTCC GGTCACTTTT GACAATCAGT ATTATGAGAA TCTTCCTTCT GGCGAAGGCC TACTGGAATC AGACCAGTTG  CTCTATATCA ATGGAGGAAG TACTAGGAAG TTGGTGGAAT TTTATATCAA GAACCAAGAT GCATTCTTTA TGAACTTCAA AACGTCCATG ATCAAAATGG GAAACAATCG ACCGCTTACT 
GGGACAAGTG GCGAGATTCG TCACAATTGT AGATTTGTTA ATTCATAA 

Retrieve as FASTA