Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
328 (304) |
| PWM (Da): |
35543.38 (32888.8) |
Transmb domain: |
i7-24o |
| PI (pH):
| 10.07 (9.75) |
Peptide Signal:
| cut: 25 range:25-328 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVRLRSIVII LVFAVSLFER GVVGQLSVNF YGRKCPNVES IIRGVMVQKL KESPLITAPA TLRLFFHDCF VNGCDGSVLI SSRPGNRAER DAPPNLSLAG DAFDVVVRAK NALEKSCPGM
VSCADILAVL ARDATVLANG PSWQVLKGRR DGRVSLASNA NVNLPGPDFN VTQLVISFAS KGLSALDMVI LSGAHTIGNS HCSAVTNRLY KFSPSNPTDP SINPSLVGSL KQACPAFGGN
PNIVQPFDRL TPFNFDNLYY RNLQQRQGLL TSDQILFSDR RTRNAVVQFA NNQTQYFMAF AAAMQKMGNI GIKTGNQGEI RRDCTRIN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (scaffold5643) and RNA seq (gba_locus_21987_iso_1_len_1246_ver_2). Incorrect prediction from medicinal plant genomics. No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTCAGGT TAAGGAGTAT TGTGATTATT CTGGTTTTCG CTGTGAGTTT GTTCGAAAGG GGTGTGGTGG GGCAGTTGTC TGTGAACTTT TATGGAAGGA AATGTCCCAA TGTGGAGTCC
ATCATAAGAG GTGTTATGGT GCAGAAGCTT AAGGAGTCCC CCTTAATCAC TGCTCCTGCT ACTCTCAGAC TCTTCTTCCA CGATTGCTTT GTCAATGGCT GTGATGGGTC GGTGCTGATT
TCATCGAGGC CAGGTAACCG GGCAGAAAGA GATGCGCCTC CCAATCTGTC ATTGGCAGGA GATGCATTTG ATGTGGTTGT CAGAGCTAAA AATGCATTGG AGAAATCATG TCCGGGGATG
GTTTCCTGTG CAGATATTCT TGCTGTCTTA GCCAGAGATG CGACTGTTTT GGCAAATGGG CCATCATGGC AAGTATTGAA AGGGCGCAGA GACGGACGAG TGTCTCTGGC ATCCAATGCC
AATGTGAATT TACCAGGACC GGATTTCAAT GTGACTCAGC TAGTCATAAG TTTTGCTTCC AAAGGGCTCT CTGCACTGGA CATGGTCATT TTGTCAGGAG CTCATACAAT AGGCAATTCA
CACTGCAGCG CAGTGACGAA TAGATTATAT AAGTTCAGCC CATCCAACCC GACGGATCCA TCCATCAATC CATCACTTGT AGGGTCGCTA AAGCAAGCAT GCCCTGCGTT TGGTGGCAAT
CCCAACATAG TTCAACCCTT CGACCGCCTA ACTCCCTTCA ATTTTGATAA TTTATACTAC AGAAATCTTC AGCAACGACA GGGCCTGCTC ACTTCCGATC AAATTCTGTT TTCAGACCGT
CGAACTCGTA ATGCGGTGGT GCAGTTCGCC AACAACCAGA CTCAATACTT CATGGCCTTT GCAGCTGCTA TGCAAAAAAT GGGTAATATT GGCATTAAGA CGGGTAATCA AGGAGAGATC
CGAAGGGATT GTACCAGAAT TAACTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCGGCCACTG GAGTCTCTGT CAAAGTGTCA TCCAGACGAG AGCAAAAAGC ACTGACAGCA GCACTTGCAG GCACGTTAAT ACACATATGA GTTGACACGG AGAGCGATAG GGACTCTGGG
AAAAATCAAA AGAAATTAAT CGTTTGAAGA AATATATCCC AACAACATGG TCAGGTTAAG GAGTATTGTG ATTATTCTGG TTTTCGCTGT GAGTTTGTTC GAAAGGGGTG TGGTGGGGCA
GTTGTCTGTG AACTTTTATG GAAGGAAATG TCCCAATGTG GAGTCCATCA TAAGAGGTGT TATGGTGCAG AAGCTTAAGG AGTCCCCCTT AATCACTGCT CCTGCTACTC TCAGACTCTT
CTTCCACGAT TGCTTTGTCA ATGGCTGTGA TGGGTCGGTG CTGATTTCAT CGAGGCCAGG TAACCGGGCA GAAAGAGATG CGCCTCCCAA TCTGTCATTG GCAGGAGATG CATTTGATGT
GGTTGTCAGA GCTAAAAATG CATTGGAGAA ATCATGTCCG GGGATGGTTT CCTGTGCAGA TATTCTTGCT GTCTTAGCCA GAGATGCGAC TGTTTTGGCA AATGGGCCAT CATGGCAAGT
ATTGAAAGGG CGCAGAGACG GACGAGTGTC TCTGGCATCC AATGCCAATG TGAATTTACC AGGACCGGAT TTCAATGTGA CTCAGCTAGT CATAAGTTTT GCTTCCAAAG GGCTCTCTGC
ACTGGACATG GTCATTTTGT CAGGAGCTCA TACAATAGGC AATTCACACT GCAGCGCAGT GACGAATAGA TTATATAAGT TCAGCCCATC CAACCCGACG GATCCATCCA TCAATCCATC
ACTTGTAGGG TCGCTAAAGC AAGCATGCCC TGCGTTTGGT GGCAATCCCA ACATAGTTCA ACCCTTCGAC CGCCTAACTC CCTTCAATTT TGATAATTTA TACTACAGAA ATCTTCAGCA
ACGACAGGGC CTGCTCACTT CCGATCAAAT TCTGTTTTCA GACCGTCGAA CTCGTAATGC GGTGGTGCAG TTCGCCAACA ACCAGACTCA ATACTTCATG GCCTTTGCAG CTGCTATGCA
AAAAATGGGT AATATTGGCA TTAAGACGGG TAATCAAGGA GAGATCCGAA GGGATTGTAC CAGAATTAAC TGACCTGTAG AATGGAAAAT TTTGTCGAAT TAACTATTCG CTATGGCTTG
AATAAATATT CGACAATTTC CTAGAAATAG TTTTGTTGTA TTTTTC
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Retrieve as FASTA
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