Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
319 (298) |
PWM (Da): |
34587.25 (32304.0) |
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PI (pH):
| 6.77 (6.35) |
Peptide Signal:
| cut: 22 range:22-319 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFLRLISAF VLLLIMATAH AQLTSNFYKK SCPNLENLVR HVVADAVRKE ARMGASLLRL HFHDCFVNGC DGSILLDDTS SFKSEKNAAP NINSARGFEV IDAIKSTVEK ACPGVVSCAD
ILTIAARDSV TLSEGPFWEV PLGRRDSTSA SVDDANRDIP SPAMDVNLLV SAFQNQGLSP RDMVALSGAH SIGQARCLLF RNRIYNENTT IDERYASVMQ GRCPTSGGDN NLSPLDFGSA
TRFDNRYFTN LEAKRGLLHS DQQLFSGGDT SIASIVDSYA ANPATFFNDF LQAIINMANI KPLTGTNGQI RTNCRMVNS
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Retrieve as FASTA
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Remarks |
Complete sequence from EST (GQ0134_E09.1 ) and genomic. Incorrect prediction from genomic (end of exon 3 and start of exon 4 are missing due to N). |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTCC TTCGACTGAT TTCGGCTTTT GTCCTCTTGC TGATCATGGC TACTGCGCAT GCCCAACTGA CTTCCAACTT TTACAAGAAA TCCTGTCCTA ATCTCGAAAA TTTGGTGAGA
CATGTGGTGG CCGACGCAGT GAGGAAAGAA GCTCGAATGG GCGCATCTCT CCTGCGCCTA CATTTCCACG ATTGTTTTGT CAATGGGTGT GATGGGTCCA TTTTGCTCGA TGACACCTCT
TCATTTAAAA GCGAGAAGAA TGCCGCCCCT AACATCAACT CTGCGCGAGG TTTTGAGGTC ATAGACGCCA TCAAATCCAC GGTGGAGAAA GCATGCCCTG GTGTTGTATC CTGTGCTGAT
ATTCTCACCA TTGCTGCTCG AGATTCTGTG ACCTTGAGCG AAGGCCCTTT TTGGGAAGTG CCACTGGGAA GGAGAGATTC CACAAGCGCT AGTGTAGACG ACGCAAATAG AGATATACCT
TCTCCAGCAA TGGATGTGAA TCTACTTGTT TCGGCTTTTC AAAACCAAGG GCTTTCTCCT CGAGACATGG TTGCACTTTC AGGCGCTCAC AGCATAGGAC AGGCACGTTG CCTACTTTTC
AGAAACAGAA TTTACAACGA AAATACAACC ATAGATGAGC GATATGCGAG TGTCATGCAG GGGAGGTGTC CCACCTCTGG AGGAGATAAC AATTTGTCAC CTCTCGATTT TGGCAGTGCC
ACGAGGTTTG ATAACCGCTA TTTCACAAAC CTGGAGGCTA AGAGAGGGCT ACTTCATTCC GATCAACAAC TATTTTCCGG TGGGGACACT TCTATAGCCT CCATAGTCGA CTCCTATGCA
GCGAATCCTG CAACGTTTTT TAACGATTTC CTGCAAGCCA TCATAAACAT GGCAAACATC AAACCCCTGA CTGGCACTAA CGGTCAGATC CGCACCAACT GCAGAATGGT AAACAGCTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGCTAATTTC CCAATCTTAT CATATTTATT CCTACTTGAA TCATCTCCTA CTTGCAGAAT CATCTCCATC TCCAGCCATA TATAATCATT ATTGGATTGG ATTGGATTCA ATAACAGAAT
CTCTCTATCT ATGGCTTTCC TTCGACTGAT TTCGGCTTTT GTCCTCTTGC TGATCATGGC TACTGCGCAT GCCCAACTGA CTTCCAACTT TTACAAGAAA TCCTGTCCTA ATCTCGAAAA
TTTGGTGAGA CATGTGGTGG CCGACGCAGT GAGGAAAGAA GCTCGAATGG GCGCATCTCT CCTGCGCCTA CATTTCCACG ATTGTTTTGT CAATGGGTGT GATGGGTCCA TTTTGCTCGA
TGACACCTCT TCATTTAAAA GCGAGAAGAA TGCCGCCCCT AACATCAACT CTGCGCGAGG TTTTGAGGTC ATAGACGCCA TCAAATCCAC GGTGGAGAAA GCATGCCCTG GTGTTGTATC
CTGTGCTGAT ATTCTCACCA TTGCTGCTCG AGATTCTGTG ACCTTGAGCG AAGGCCCTTT TTGGGAAGTG CCACTGGGAA GGAGAGATTC CACAAGCGCT AGTGTAGACG ACGCAAATAG
AGATATACCT TCTCCAGCAA TGGATGTGAA TCTACTTGTT TCGGCTTTTC AAAACCAAGG GCTTTCTCCT CGAGACATGG TTGCACTTTC AGGCGCTCAC AGCATAGGAC AGGCACGTTG
CCTACTTTTC AGAAACAGAA TTTACAACGA AAATACAACC ATAGATGAGC GATATGCGAG TGTCATGCAG GGGAGGTGTC CCACCTCTGG AGGAGATAAC AATTTGTCAC CTCTCGATTT
TGGCAGTGCC ACGAGGTTTG ATAACCGCTA TTTCACAAAC CTGGAGGCTA AGAGAGGGCT ACTTCATTCC GATCAACAAC TATTTTCCGG TGGGGACACT TCTATAGCCT CCATAGTCGA
CTCCTATGCA GCGAATCCTG CAACGTTTTT TAACGATTTC CTGCAAGCCA TCATAAACAT GGCAAACATC AAACCCCTGA CTGGCACTAA CGGTCAGATC CGCACCAACT GCAGAATGGT
AAACAGCTAA TTGGAACGGA TGGCGATTTA TCTGCCTAGT CTATTCTATG GAGAAGTATT TTTTTTCAAA ATGTTTAGAA GATATGTGCA AGAATGGTGC GCACCATTTG TATTCGTGGT
TATCCCGCCT CTGTGTCAAA AGGTTGTAAC TAAATATGTT ACAAATTCTT TCTAACAAAA AA
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Retrieve as FASTA
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