Entry information : PabPrx162
Entry ID 12696
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2021-04-21 (Christophe Dunand)
Peroxidase information: PabPrx162
Name PabPrx162
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx162
start..stop
S start..stop
PgPrx05 467 1e-168 1..252 75..328
PabPrx139 449 1e-161 1..252 75..328
PtaPrx21-2 412 4e-147 1..252 70..323
PtaPrx21 407 5e-145 1..252 70..323
Literature and cross-references PabPrx162
Protein sequence: PabPrx162
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   251
PWM (Da):   %s   26319.43  
PI (pH):   %s   7.77
Sequence
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Send to Peroxiscan
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GCDASILIDA KGKNVPEKAA FPNQSVRGFN IIDAAKAAVE KKCPRVVSCA DIIALATRDA VALAGGP*YS LPTGRRDGRI SSIKDVDLSG PSSLVSDAAF SAKGLNIADL VALFGAHTVG  NSLCSFFSDR LFSVQGNGKP DPTMDPALVA MLKKVCPSPT SSSTQDPNVF LDQNTPFIFD NSFYKQLQLK HGILQIDQEL TYDSSTKNLV TSFATNGNAF SESFVAAIIK TGNIGVLTGN 
NGEIRANCRT VN 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction (exon 1 and part of exon 3 are missing).. Stop exon 3in frame and frame shift in
DNA
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GTGAATAACG TTCATTTACG CTGTTGAAGG GCTGCGACGC ATCAATTCTG ATCGATGCTA AAGGTAAAAA CGTACCAGAG AAAGCAGCAT TCCCAAACCA ATCGGTGAGA GGATTTAATA  TAATCGATGC AGCAAAAGCC GCGGTTGAAA AGAAATGCCC AAGAGTTGTG TCTTGTGCTG ATATAATTGC ACTTGCTACC AGAGACGCTG TTGCCCTGGT ATAAATTTCC TTCAAATTTG  CGATCTTCAA CATCGATTTC GGTTTACTAT CAGTAAACTA ATCTGTTAAT CCATGTTAAT CGGTATCTAT TAAATAGCCA CACAGATTAG AAAAAGTTAT AAAGAACACT TGGCTTCACT  GGATGCAATA ACAGAAACAT ACTAACTTGG TTGAAACTTT GACAGGCAGG TGGGCCATAG GCCATAATAC AGTCTACCAA CGGGAAGAAG AGATGGAAGG ATTTCTTCAA TAAAAGATGT  GGATTTAATC CGGACCCAGT TCACTTGTTT CTGACGCAGC ATTCTCGGCC AAGGGTTTGA ACATCGCAGA TTGGTCGCTC TGTTCGGTTA GTATTATTAA TATTTTACAC ATCCACTAAA  TTTCGGTAGA AGGTAATTAA TTTTTAATTA AGTGAATTTA AAGGATACAT ATGTAATTGG ATTGTTTATT TTCGTATATT TTCTTTTGGG TTCAACTCTA GGCGCGCATA CGGTGGGGAA  CTCGCTCTGC AGTTTCTTTA GTGATCGACT ATTCAGTGTT CAAGGAAATG GGAAGCCGGA TCCTACTATG GATCCCGCAT TAGTAGCGAT GTTGAAGAAA GTCTGCCCAT CTCCGACCTC  GTCGTCAACA CAGGACCCCA ACGTATTTCT GGACCAGAAC ACTCCGTTTA TCTTCGATAA CAGCTTCTAC AAACAACTGC AATTAAAGCA TGGAATTCTT CAAATTGATC AGGAGCTGAC  CTATGATAGC TCAACCAAGA ACCTGGTAAC GAGCTTTGCC ACTAATGGAA ATGCGTTTAG TGAGAGCTTC GTCGCCGCCA TAATAAAAAC GGGGAACATT GGGGTATTAA CGGGCAACAA  CGGAGAAATT CGAGCTAATT GCAGAACCGT GAATTGAGCA TCGTTTTCCT ACTTAAGGTC ACGGACGGAA ATACATTCAG GTTCCCAAAA TTGAATTTGT TACTTTGAAA GCAAAGTCTC 
GAACAACGAT ATCCGCCATT TA 

Retrieve as FASTA