Entry information : PabPrx188(PAB00051157/MA_6833274g0010 + PAB00061860/MA_91956g0010)
Entry ID 12718
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-05-17 (Christophe Dunand)
Peroxidase information: PabPrx188(PAB00051157/MA_6833274g0010 + PAB00061860/MA_91956g0010)
Name PabPrx188(PAB00051157/MA_6833274g0010 + PAB00061860/MA_91956g0010)
Class Class III peroxidase     [Orthogroup: Prx041]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx188
start..stop
S start..stop
PtaPrx40 551 0 1..326 1..326
PabPrx52 547 0 4..320 1..318
PgPrx32 543 0 7..320 1..314
PabPrx300 527 0 7..320 1..315
Literature and cross-references PabPrx188(PAB00051157/MA_6833274g0010 + PAB00061860/MA_91956g0010)
Protein sequence: PabPrx188(PAB00051157/MA_6833274g0010 + PAB00061860/MA_91956g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (164)
PWM (Da):   %s   36922.5 (17262.7)  
PI (pH):   %s   8.66 (6.49) Peptide Signal:   %s   cut: 27 range:27-190
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASMAAMRIT IKSVCCLVLS LTCAYGQLDP FFYGKTCPQA LSIVNSTVVQ AILKEPRIGA SVLRLHFHDC FVNGCDGSVL LDDTSTFTGE KTANANNNSA RGFGLIDKIK KNLEEACSGV  VSCADILAIA ARDSVVMLGG PTWTVMLGRR DSRTASLSVA NSNIPSPASD LANLTSKFRD QGLSQPEMVA VSGAHTIGKA RCTVFRNHIY NDSNIDTAYA KSLQDKCPTS GGDNKLSPLD 
YKTPTKFDNC YYRNLVAKKG LLHSDQELFN GVSTDSQVTQ YRNNLKLFER DFAAAIVKMG NIMPLTGSRG EIREKCRKRN SDSSIFHMQR ESQRQEIII 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq (isotig00118). Incorrect prediction (two independent scaffold containing 5' end and 3'end due to scaffold border but overlap of 20 aa).
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTTGTATATA ATATATATGT TATGTCTTCG GGCTGTCGGA ATTGAGTTGA AGCATAGAAG CTCATATGCG GCCAAGACTA TGTTATATTA TATTTACTAA ATTTTAGAGT TGTTCTCTTG  CAGGGTTGTC ATGGGGTTAT TCTATTTAGT TTATTCTTCT GGATTAGTAG ATCATATTGG TTTGTGATCC TCCATTATCA ATACATCTAC CTTTTGCTCC AGTATAGAAA ATTGCATTCA  TTTAGAGCTG CAGAGCGATG GCTTCTATGG CTGCCATGAG GATCACCATT AAAAGTGTCT GCTGTCTGGT TTTATCCTTA ACTTGTGCTT ATGGGCAGCT TGACCCATTC TTTTATGGTA  AAACTTGCCC TCAGGCTTTA TCCATAGTCA ATTCTACCGT AGTCCAAGCA ATCTTAAAGG AACCTCGAAT TGGAGCATCG GTGCTTCGGC TTCATTTTCA CGACTGTTTC GTTAATGGTT  GTGATGGGTC TGTTCTTCTG GACGATACCT CGACTTTTAC AGGAGAAAAG ACAGCAAATG CTAATAACAA TTCCGCGAGA GGTTTCGGGC TCATTGATAA AATAAAGAAG AACTTGGAGG  AAGCTTGCAG CGGCGTCGTA TCATGTGCTG ACATTTTGGC AATTGCTGCT CGCGATTCTG TTGTAATGTT GGGAGGTCCT ACATGGACAG TGATGCTTGG AAGAAGAGAC TCCAGGACTG  CAAGTCTAAG CGTTGCCAAC AGCAACATTC CCTCTCCTGC TTCCGACCTC GCCAATCTGA CCTCCAAATT TCGAGATCAG GGACTTTCTC AACGGGAAAT GGTGACACTT TCAGGTGCTC  ACACCATCGG TAAAGCGCGG TGCACGGTAT TCAGAAGTCA TATTTATAAC GATTCGAACA TAGACACAGC GTATGCTAAG TCATTACAAG ACAAGTGCCC CAGGAGTGGA GGCGACAACA  AATTGTCACC TCTTGATTAC AAAACGCCTA CAAAGTTTGA CAACTGTTAC TACAGAAATC TGGTGGCGAA GAAAGGACTT CTCCACTCCG ATCAAGAGCT TTTCAATGGA GTGTCTACTG  ATTCTCAGGT TACCCAGTAC AGAAACAACT TGAAACTTTT CGAGAGAGAC TTCGCTGCTG CAATTGTCAA GATGGGAAAT ATCATGCCTC TCACGGGTTC CCGAGGAGAG ATCCGGGAGA 
AATGCAGAAA ACGGAACTCA GATAGTTCCA TCTTTCATAT GCAGCGCGCA TCTCAGAGAC AAGAGATCAT TATTTGATAT GTGGTGTGCT 

Retrieve as FASTA