Entry information : PtaPrx85(PTA00000806)
Entry ID 12732
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2021-01-13 (Christophe Dunand)
Peroxidase information: PtaPrx85(PTA00000806)
Name PtaPrx85(PTA00000806)
Class Class III peroxidase    [Orthogroup: Prx033]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx85
start..stop
S start..stop
PabPrx107 291 2e-100 1..165 80..248
PgPrx02 257 9e-88 1..164 28..192
PabPrx59 256 9e-87 1..164 74..238
PsiPrx04 251 8e-85 1..164 80..244
Literature and cross-references PtaPrx85(PTA00000806)
Protein sequence: PtaPrx85(PTA00000806)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165 (307)
PWM (Da):   %s   17592.8 (33582.7) Transmb domain:   %s   i7-26o
PI (pH):   %s   4.77 (5.41) Peptide Signal:   %s   cut: 29 range:29-335
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCDGSVLLDD TATFEGEKTA GPNLNSSRGF EVIDYIKEEL ESACPGKVSC ADILTMAARD SVVLTRGPYW EVPLGRRDSL TASKAAVANS LPAPTSNIST LISKFKDVGL TETDLVTLSG 
AHTIGKARCA TFNSRFMGLK PGRYPTLETE FLTSLQQLCF FDNNT 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction., exon 1 and 4 are missing due to NN and scaffold border. Also found in PTA00010073
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGATG GTTCAGTGCT GCTGGATGAC ACTGCTACAT TTGAGGGAGA GAAGACAGCA GGTCCCAACC TCAACTCTTC TCGTGGTTTC GAAGTCATAG ATTACATCAA AGAAGAGCTT  GAATCTGCAT GCCCTGGAAA AGTTTCATGC GCTGATATTC TTACAATGGC AGCACGGGAT TCTGTGGTCT TGGTAAAATT TTACTGCTTT ATTGCTGAAG TTCAAATTCA TAAATGGGCA  TTTACCTGTT CAGAGATTTA TGAAGATTAT AGAGTTAAAG AGGAGAATTT TCTTTTTGTC ATGATCAGAC ACGAGGACCA TATTGGGAGG TGCCGCTGGG CAGGAGAGAT AGCTTAACAG  CAAGCAAAGC AGCAGTAGCT AACAGCCTTC CGGCTCCAAC ATCGAATATT TCAACACTCA TCTCCAAGTT TAAGGATGTC GGTCTCACAG AAACCGATCT GGTTACTCTC TCAGGTTTTC  TCATCTATAT ATACATTTAT CTTTATAAGA GTAATCTGAA CACATGATCT ATTTTAACTA TACAAAGGAT GAAAAATTCT GAAGGGTAAA CGCTTAATAT CCATGCTTAA AGACATGAAA  AGTTGAAAGA ATCAAGGGAT ATATATGCGC GTAGGGTGTG TGTGATGGAT ATGAAACTGT AAAATGATCA ATTTCGAATC CAAAATTCTG TGATTTACAA AGTTTCAGTG TAATGTTAAG  TTTTGTAAAA GAGTTATTAT TATTCAGGAT TATGTCGCTA GGAACCAAAA AAACTGATAA TTTTTTCAAA AGGACTTGTC ATTGAGGATT TTAGATTACC AAGTGATTGA TATGTTTTGC  AGGTGCCCAT ACAATAGGAA AGGCACGTTG TGCAACATTC AACTCTAGGT TCATGGGACT CAAACCAGGT CGATATCCCA CTCTTGAAAC AGAGTTCTTA ACGTCGCTCC AACAACTTTG 
CTTCTTTGAT AACAACACT 

Retrieve as FASTA