Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
327 (305) |
PWM (Da): |
35282.83 (32943.4) |
Transmb domain: |
i7-29o |
PI (pH): |
4.87 (4.67) |
Peptide Signal: |
cut: 23 range:23-327 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGKHQILLAI LLLVLASIPA FPAKIPFPLS TDYYEKSCPL AVPIVSDQMR LATLKEARMA ASILRLHFHD CFVQGCDASV LLDDTPTFIG EKTANANVNS LRGFEVIDAI KERLETECPG
VVSCADILTL AARDGVVLAG GPYWDVPLGR KDSTTASLSE ANINIPMPTS NIQTLISKFL LQGLSVTDMV ALVGGHTIGQ ARCTNFRQRI YNGQNAGNEL YVSGLRETCL PSGGDDNLSP
LDHVSPTSFD NSYYINLVNG EGLLNSDQEM YSTGLGSVTA HIVKDYATDP LEFAKDFSDS MVKMGNIVNP QTFLTGEVRK NCRLVNH
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and RNA seq . Incorrect prediction (5' is missing due to scaffold border). Completed with mRNA |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTGAAAGAAG CTCGAATGGC AGCCTCCATA CTTCGCATGC ATTTTCACGA CTGCTTTGTC CAGGTACTTT TTTTTTTTTC ATTTCTTAGT TTACTCTAGA GGTTTAGCCA TTGCTATAAT
ATTTGGAATT AACGCAGGGA TGCGATGCGT CTGTGCTGCT GGATGACACG CCCACGTTTA TAGGGGAGAA AACAGCAAAC GCAAATGTAA ATTCGCTGAG AGGGTTTGAA GTTATAGATG
CCATCAAAGA AAGACTGGAG ACTGAGTGCC CCGGCGTTGT GTCTTGTGCT GACATACTTA CCCTCGCTGC TCGAGATGGA GTAGTACTGG TATGCTATAC ATTTGTCAAC TCCAAGGAGT
TTTGTTAATC CACTTTTTTC AATATTGTTG GGTATTGTTG GGTATTATTA GTCCGTGCAC CTGCACTGTC CAATGCAATG CTTAGAAGTA CTATAGCGAT TAATAATTCG TTTTGAGCAT
TGATACTTTT TTTGAGGTAC TTGAATAGGT CAAATAGGTT AAATGTTTAC ATAGCTCGAA TCTCTTATAC AGCTTAAATG TTTGCATAGC TGGAGACTTT TAGACAATCC TTACATCTTA
AATGTTTGCA TAGCTGGAGA CCCTTAAACA GCCCTTACAG CCTTAAATGT TTACTTAAAT AGGCTTCTCA CAGTACATTT TTCCTCCAAT TTTTCCATAC AATATTGTAG TGAATTTAGA
CAATATTATT GTCCACAGCC ACTAGTAATC ATATGTTTCA TACTTTTTCT ATGATTGAAA TGCAATTTAG TCATCATTGA AAATACATAT ATTGTTTACT GGTTGCTTCT TGTTAGCTGG
TTAGTTGGTT GCTACTTGAT TTTTGTTTCT ATAGTAATTT GGGAATAAAT CCATAATACC ATCTTAAGTC TCTTCTCTTT GCTACTTATC CTTATCAGGC TGGAGGCCCA TATTGGGACG
TTCCCTTGGG GAGAAAGGAC TCAACAACCG CTAGTTTGAG TGAGGCAAAC ATCAATATTC CCATGCCTAC TTCAAATATC CAGACTCTCA TTTCAAAGTT CTTATTACAA GGCCTGTCAG
TCACAGATAT GGTCGCACTC GTTGGTAAGT GAACGCCATG TTGCATTTTT AGATATTGAT TTGTATTGGA GACAAACTTT TGTTAGTCTT TAGGGTTTCC CATTGCGCAG GCGGACACAC
AATTGGACAA GCTCGATGCA CAAATTTTAG GCAAAGGATT TATAACGGCC AGAATGCAGG CAATGAACTC TATGTATCTG GATTGAGAGA AACCTGCCTT CCGTCTGGTG GCGATGACAA
CTTATCGCCC TTGGATCATG TAAGTCCCAC GTCGTTCGAC AATTCATATT ACATAAACTT AGTGAATGGA GAAGGGCTCC TCAACTCTGA CCAAGAGATG TATTCAACTG GCCTGGGGAG
CGTAACGGCG CATATCGTCA AAGATTATGC CACTGATCCG CTGGAATTTG CCAAGGACTT CTCGGATTCA ATGGTGAAGA TGGGAAATAT AGTGAATCCT CAAACTTTCC TGACTGGTGA
AGTGAGGAAG AACTGCCGCT TAGTCAATCA TTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGACTGCTTT GTCCAGGGAT GCGATGCGTC TGTGCTGCTG GATGACACGC CCACGTTTAT AGGGGAGAAA ACAGCAAACG CAAATGTAAA TTCGCTGAGA GGGTTTGAAG TTATAGATGC
CATCAAAGAA AGACTGGAGA CTGAGTGCCC CGGCGTTGTG TCTTGTGCTG ACATACTTAC CCTCGCTGCT CGAGATGGAG TAGTACTGGC TGGAGGCCCA TATTGGGACG TTCCCTTGGG
GAGAAAGGAC TCAACAACCG CTAGTTTGAG TGAGGCAAAC ATCAATATTC CCATGCCTAC TTCAAATATC CAGACTCTCA TTTCAAAGTT CTTATTACAA GGCCTGTCAG TCACAGATAT
GGTCGCACTC GTTGGCGGAC ACACAATTGG ACAAGCTCGA TGCACAAATT TTAGGCAAAG GCTTTATGAC GGCCAGACTG CGGGCAATGA ACTCTATGCA TCTGGATTGA GAGCAACCTG
CCCTCCGTCT GGTGGCGATG ACAACATATC GCCCCTGGAT CATGCAAGTC CCACGTTGTT CGACAATTCA TATTACACCA ACTTAGTGAA TGGGGAAGGG CTCCTCACCT CTGACCAAGA
GATGTATTCA GCTGGCCTGG GGAGCCCGGG GAGCGCACTG ACGGCGCATA TTGTCAAACA TTATGCTACT GACACTCTGG AATTCGCCAA GCAGTTCTCG GATTCAATGG TGAAGATGGG
AAACATAGTG AACCCTGAAA CTTTTCTGAC TGGTGAAATA AGGAAGAACT GCCGCGCAGT CAATCTATAA GGACTTGATT TCTTCGCGAT TACATTAAAT TTGAATAGTG GGGTAGAATA
ACAGAGCCGA TTTTCTATAG AGATATCGCT TATTCATAGT AGGAAGTATA ATTTTACCTC TGTTTTTCTC AAATTCTATG CAGAAAGATT GTCGTGATAT TTTGTCACAG TTCGT
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Retrieve as FASTA
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