The peroxidases and oxidases database
Entry information : PabPrx300(PAB00008545 / MA_10429012g0010)
Entry ID 12767
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2021-05-17 (Christophe Dunand)
Peroxidase information: PabPrx300(PAB00008545 / MA_10429012g0010)
Name PabPrx300(PAB00008545 / MA_10429012g0010)
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx300
start..stop		 S start..stop
PgPrx32 626 0 1..315 1..314
PabPrx52 592 0 1..315 4..318
PtaPrx40 527 0 1..315 7..320
PabPrx188 527 0 1..315 7..320
Literature and cross-references PabPrx300(PAB00008545 / MA_10429012g0010)
DNA ref. GenBank:   CBVK0100916643.1   UETF01020502.1
Protein sequence: PabPrx300(PAB00008545 / MA_10429012g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   315 (295)
PWM (Da):   %s   34150.19 (31877.1)  
PI (pH):   %s   9.55 (9.55) Peptide Signal:   %s   cut: 21 range:21-315
Sequence 0
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKIAIRSVCC LVSFLTCAYG NLSPSFYDKA CPQALSIVKS TVIQAITKEP RIGASLLRLH FHDCFVNQGC DGSILLDDTS TFTGEKTANA NNNSARGFGV VDKIKRKMEK ACSGVVSCAD  ILAVAARDSV VTLGGPTWTV MLGRRDSGTA NRTAANTNIP APTANLANLT SKFGAQGLSK REMVVLSGGH TIDKAHCTSF RDHIYNDSNI DTAYAKSLQD KCPRSGGDNR LSPLDYQMST 
KFENNYYKNL VARKGLLHSD QELFNGVSTD SLVTKYSKNL KLFENDFxAA MIKMGNIMPL TGSQGQIRKN CRKRN* 

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Remarks Complete sequence from genomic and RNA seq (UCPabies_isotig16022). Incorrect prediction (contains 2 ORF and exons 1 and 2 + end of last exon are missing, scaffold border and NN between the ORFs). Completed with WGS from Genebank based on homologie PRx from P.glauca.CBVK0100916643.1 and UETF01020502.1
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTGGGAGGTC CTACATGGAA TGTGTTGCTT GGAAGAAGAG ATTCCAGGAC TGCGAACCTA ACCGCTGCAA ACAACAACAT CCCCGCTCCT ACTTCCAACC TCGCCAATCT GACCTCCAAA  TTTCGAGCAC AGGGACTTTC TAAACGGGAA ATGGTTGTGC TTTCAGGTAA CCCAGAATGC CTGCTTACGG CTCTAAACAG TTTCTACTCT CAAATTCTTG GCTTCTAAAT TCGTTTATGT  TATTTCAGGT GGTCACACCA TCGGTAAAGC GCGTTGCACG AGCTTTAGAG ATCATATATA CAACGATTCA AACATAGACA CGACCTACGC TAAGTCATTA CAGGCCAAGT GCCCCACAAG  TGGAGGGGAC AACAGATTGT CGCCTCTCGA TTACCAAACG CCGACCAAGT TCGAAAACAA TTACTACAAA AATCTGGTAG CAAGGAAAGG ACTTCTGCAC TCTGATCAAG AGCTTTTTAA 
TGGAGTATCT ACTGATTCTC TG 

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