Entry information : PabPrx40(PAB00005665 / MA_10425995g0010)
Entry ID 12778
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PabPrx40(PAB00005665 / MA_10425995g0010)
Name PabPrx40(PAB00005665 / MA_10425995g0010)
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx40
start..stop
S start..stop
PabPrx50 649 0 1..357 1..357
PtaPrx14 594 0 1..328 1..328
PtaPrx63 591 0 1..328 1..328
PabPrx98 579 0 1..328 1..328
Literature and cross-references PabPrx40(PAB00005665 / MA_10425995g0010)
Protein sequence: PabPrx40(PAB00005665 / MA_10425995g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (335)
PWM (Da):   %s   37892.48 (35782.6)  
PI (pH):   %s   4.67 (6.23) Peptide Signal:   %s   cut: 26 range:26-360
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFRYNSVNV ISITFAFAFL QCTSAQLSPT FYQTTCPNVT TIVGQVIQQA LQNDSRIAAS LLRMHFHDCF VNGCDGSVLL DDTANFTGEK TAGPNNNSLR GFDVVDNIKS AVESACSGIV  SCADILGIAA EQSVILSGGP SWSVQLGRRD STTANATLPN TALPAPTDNL SVITTKFQAV GLSVTDVVAL SGGHTIGRAR CTVFISRLYN FSGTGNPDPT LNSSYLSTLQ STCPQNGNGS 
TITPLDPGTQ DTFDNNYFVN LQNQMGLLQS DQELLSTSGA STISIVNDYT SSQTHFFSNF SNSMINMGNI SPLTGTSGEI RLNCRKVNSN QNRASESLSQ SVSNLLNVIE QYQSVSQ 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction, frame shift in last exon.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCATTTC GATATAATTC AGTGAATGTT ATATCCATTA CATTTGCATT TGCATTCCTT CAGTGCACCA GTGCCCAGCT TAGCCCTACT TTTTACCAGA CTACATGCCC CAATGTTACG  ACTATAGTGG GGCAGGTCAT CCAGCAAGCT CTGCAAAATG ATTCGAGGAT AGCGGCCTCT CTCCTTCGTA TGCATTTTCA CGACTGCTTT GTTAATGTAA GTAGCAGATT TGTATTCAGT  ACTTTGGGAT TTATAATACT GATACTCCAT TCATCGTTGA TTTTAAGGGC TGTGATGGAT CCGTTCTCTT GGATGACACG GCCAATTTTA CTGGGGAAAA GACAGCAGGT CCTAACAACA  ATTCCCTGAG GGGCTTTGAC GTGGTGGACA ACATCAAGTC GGCAGTAGAG AGTGCATGCA GCGGAATAGT TTCTTGTGCC GACATTCTTG GCATAGCTGC AGAGCAGTCA GTCATATTGG  TGTGTATGAA GATTATAGCC ATTTATTTGA GTTAATGTTA ATGTTTTACT TTTAATTAAT TTAAAAGTAA ATCATAATAT CTCTAACATC TGTGAATTTT GGAATTTGTG TTTACTACAT  AAACCCTAAA ACTTCTGAAA ATGAAGATAT ATAGAAGTTG TGTAACAAGA TCATGATAAC AATGAAATGG TGCAGTCTGG CGGTCCATCC TGGAGTGTGC AGTTAGGAAG ACGGGATAGC  ACCACTGCCA ATGCAACTCT TCCAAACACA GCATTACCTG CACCAACTGA CAACCTCTCA GTAATTACAA CAAAGTTCCA GGCTGTGGGA CTTTCGGTAA CGGATGTAGT TGCTTTGTCA  GGTATTTATC AATTTGTTTT ACAGCAATGT TAGTTTAAAT TTCAAACTTG AGGAAGGTAT TTGACTTCCA AATTGATAGA AAGGAAGCAG ACAAACCCAC TTGATTTAAC TTAACTTTCA  TAGATTTCTT CAGTCGTGCA AATTTACATA GTAATGCTAT GAAAATCCAT TTTATACCAT GCCTTCTCCT TTGTTACAGA CATTTCATAG ATTCAATGCC TGCTACTTTG TTACAGCCAT  TTCATAGATT CAAAGTCTTG TATGCATGTA TTAAGTTGGT GGTTACTGGA TCCAGGGGGA CACACAATCG GGCGAGCTCG CTGCACAGTT TTCATCAGCA GACTTTACAA TTTCAGTGGA  ACGGGAAATC CAGATCCGAC ACTCAATTCC TCCTACCTAT CCACCTTGCA AAGCACAATC CAGATCCGAC ACTCAATTCC TCCTACCTAT CCACCTTGCA AAGCACGTGC CCACAGAATG  GTAACGGGAG CACTATAACG CCACTTGATC CCGGTACTCA GGATACCTTC GACAACAACT ACTTCGTAAA TCTCCAAAAT CAAATGGGGC TTCTACAGTC AGATCAAGAG CTGCTTTCCA  CATCCGGGGC AAGTACGATT TCCATTGTGA ATGACTACAC CAGCAGTCAA ACCCATTTTT TCTCCAACTT CTCCAACTCG ATGATCAACA TGGGAAACAT AAGTCCTCTA ACGGGAACCA  GCGGAGAAAT CCGCTTAAAT TGCAGGAAGG TCAATAGCAA TCAGAATCGG GCTAGCGAAT CGTTGTCTCA ATCTGTTTCT AATTTGCTCA ACGTCATAGA GCAGTATCAA TCTGTTTCAC 
AGTGA 

Retrieve as FASTA