Entry information : PabPrx42(PAB00005845 /MA_10426168g0010)
Entry ID 12780
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-28 (Christophe Dunand)
Peroxidase information: PabPrx42(PAB00005845 /MA_10426168g0010)
Name PabPrx42(PAB00005845 /MA_10426168g0010)
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx42
start..stop
S start..stop
PgPrx04 683 0 1..337 1..337
PtaPrx03 618 0 1..335 1..334
GbPrx39 528 0 3..336 31..366
CmichPrx05 503 0 23..335 27..339
Literature and cross-references PabPrx42(PAB00005845 /MA_10426168g0010)
Protein sequence: PabPrx42(PAB00005845 /MA_10426168g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (300)
PWM (Da):   %s   36219.4 (32153.1) Transmb domain:   %s   i12-34o
PI (pH):   %s   7.7 (6.13) Peptide Signal:   %s   cut: 30 range:30-329
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMSRIGRGST ALGFIVVVAI LFELVPVNAQ GTVAGFYKQT CPSAEKLVQV RVQRKFRTDK TIVPALLRMH FHDCFVRGCD ASLLVDSTPG NQAEKEAGPN QTVRGFEFID EMKKVLETVC  PNTVSCADII ALATRDAVAL AGGPRYDVPT GRRDGTQSNV DDADKLPDPN DSATQSTSAF ASKGLSVLDL VTLLGAHTVG ITHCSFFNDR LYNFLGTGKA DPTMDPALVT KLKTTCPDPA 
SGSSADPPIN LDQGTPAVFD DSFFKQIAAR RGILQIDQQL FEDATTTNFV RSYTGSSPNR PLNFSQQFTQ SIVKMGNLGV LTGNQGTIRK NCRIVKT 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction, contains two ORFs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAGTC GGATTGGAAG AGGTAGTACA GCTCTGGGGT TCATTGTGGT CGTGGCAATA TTATTTGAGT TAGTGCCAGT TAATGCACAA GGCACTGTAG CAGGATTCTA CAAACAGACT  TGCCCAAGCG CTGAGAAACT CGTGCAGGTA AGGGTACAGA GAAAATTCCG CACCGATAAG ACCATTGTGC CTGCGCTTCT TCGAATGCAT TTTCACGATT GCTTCGTCAG AGTAAGAATT  GTTCTTCCTT CCTATCTGGT AAACAATTTG CTTTGAATCC ATGCTATATA TTCAAGTATT CACAATCCAT GATATATATT CAGTATTCAC AATAGGCTCT TTTTCATGAT TTTGTTCTGT  GCTTCTGAAT TTGTTTCAGG GGTGTGACGC ATCCCTGCTG GTAGATTCCA CTCCTGGAAA CCAAGCAGAG AAGGAGGCAG GACCCAATCA GACTGTGAGA GGATTTGAAT TCATTGACGA  GATGAAGAAG GTCTTGGAAA CTGTATGTCC CAACACAGTA TCCTGTGCTG ATATTATTGC TCTGGCTACA AGAGATGCTG TGGCCCTGGT AATAATTACA TTCAATCTCA CAGTCGAATC  CTGAAATATA GTAACATTTC TCAGTTGGTA TCGTCTGTGA AGGTTTTTTA ATTTATGGCA GAAGAACAAT GAGGAATTTT TAATATGAGT GTATTGGTGA TTAGCTGTTA CTACTGTGTG  TTATGCACAG GCGGGTGGGC CGCGTTATGA TGTTCCAACT GGAAGAAGAG ATGGTACACA GTCCAATGTG GATGATGCAG ATAAACTTCC TGATCCCAAC GATAGCGCCA CACAGTCCAC  TTCAGCTTTT GCTTCCAAGG GTCTCTCTGT TTTAGATCTG GTTACCCTAT TAGGTCTGGC TCCTGAGTCC CCACCCTGCA AAAACAAATT ACATTGAATG CTATTTCTTT TATTCTTTTC  ACAGAATCAT GTGTACTATT TATTCATGAT GGCGATACTG ATAGTTGATG CAGGTGCACA CACCGTAGGC ATTACCCATT GCAGTTTCTT TAACGACAGG CTGTACAACT TCCTGGGAAC  TGGCAAGGCA GACCCAACCA TGGATCCAGC CCTTGTAACC AAGTTGAAGA CCACATGCCC AGATCCTGCC TCCGGAAGCT CTGCAGATCC CCCGATAAAT CTGGACCAGG GAACCCCCGC  TGTTTTCGAT GACAGTTTCT TCAAGCAGAT TGCGGCCCGC AGAGGTATCT TGCAAATTGA TCAACAGCTG TTCGAGGACG CAACCACCAC TAACTTTGTG AGGAGCTACA CAGGATCCTC  ACCAAACCGT CCTCTGAATT TCAGCCAGCA GTTCACTCAG TCCATTGTTA AGATGGGGAA CTTGGGGGTG CTCACTGGTA ATCAAGGAAC TATCAGGAAA AACTGTAGAA TTGTCAAGAC 
CTGACAGAAG CATTTTGTCA CTGTCAATTA GTTATTCGTT GCATTTTCCT GGGAATATTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGAGTC GGATTGGAAG AGGTAGTACA GCTCTGGGGT TCATTGTGGT CGTGGCAATA TTATTTGAGT TAGTGCCAGT TAATGCACAA GGCACTGTAG CAGGATTCTA CAAACAGACT  TGCCCAAGCG CTGAGAAACT CGTGCAGGTA AGGGTACAGA GAAAATTCCG CACCGATAAG ACCATTGTGC CTGCGCTTCT TCGAATGCAT TTTCACGATT GCTTCGTCAG AGGGTGTGAC  GCATCCCTGC TGGTAGATTC CACTCCTGGA AACCAAGCAG AGAAGGAGGC AGGACCCAAT CAGACTGTGA GAGGATTTGA ATTCATTGAC GAGATGAAGA AGGTCTTGGA AACTGTATGT  CCCAACACAG TATCCTGTGC TGATATTATT GCTCTGGCTA CAAGAGATGC TGTGGCCCTG GCGGGTGGGC CGCGTTATGA TGTTCCAACT GGAAGAAGAG ATGGTACACA GTCCAATGTG  GATGATGCAG ATAAACTTCC TGATCCCAAC GATAGCGCCA CACAGTCCAC TTCAGCTTTT GCTTCCAAGG GTCTCTCTGT TTTAGATCTG GTTACCCTAT TAGGTGCACA CACCGTAGGC  ATTACCCATT GCAGTTTCTT TAACGACAGG CTGTACAACT TCCTGGGAAC TGGCAAGGCA GACCCAACCA TGGATCCAGC CCTTGTAACC AAGTTGAAGA CCACATGCCC AGATCCTGCC  TCCGGAAGCT CTGCAGATCC CCCGATAAAT CTGGACCAGG GAACCCCCGC TGTTTTCGAT GACAGTTTCT TCAAGCAGAT TGCGGCCCGC AGAGGTATCT TGCAAATTGA TCAACAGCTG  TTCGAGGACG CAACCACCAC TAACTTTGTG AGGAGCTACA CAGGATCCTC ACCAAACCGT CCTCTGAATT TCAGCCAGCA GTTCACTCAG TCCATTGTTA AGATGGGGAA CTTGGGGGTG 
CTCACTGGTA ATCAAGGAAC TATCAGGAAA AACTGTAGAA TTGTCAAGAC CTGA 

Retrieve as FASTA