Entry information : PabPrx50(PAB00008197 / MA_10428648g0010)
Entry ID 12785
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PabPrx50(PAB00008197 / MA_10428648g0010)
Name PabPrx50(PAB00008197 / MA_10428648g0010)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx50
start..stop
S start..stop
PabPrx40 649 0 1..357 1..357
PabPrx235 589 0 1..328 1..328
PtaPrx63 572 0 1..328 1..328
PtaPrx14 570 0 1..328 1..328
Literature and cross-references PabPrx50(PAB00008197 / MA_10428648g0010)
Protein sequence: PabPrx50(PAB00008197 / MA_10428648g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (332)
PWM (Da):   %s   38170.63 (35231.3)  
PI (pH):   %s   4.59 (4.47) Peptide Signal:   %s   cut: 26 range:26-357
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEFGWCSIHV TWITFVFAFV QCVHAQLSPN FYQSTCPNVT SIVGQVIQQA LQNDSRIAAS LLRLHFHDCF VNGCDGSILL DDTANFTGEK TAIPNNNSLR GFDVVDNIKS AVESACNGTV  SCADILAIAA EQSVVLSGGP SWSVQLGRRD STTVNATLPN TAIPAPTDNL SLIITKFQDV GLSVTDVVAL SGAHTIGRAR CTVFISRLYN FNGTGNPDPT LNSSYLSTLQ STCPQNGSGN 
TLTPLDPTTL DTFDNNYFGN LQNNMGLLQS DQELLSTAGA STISIVTDYS SSQTHFFSNF SNSMINMGNI SPLTGTSGEI RLNCRKVNSN QNRASESLSQ SVSNLLNVIE QYQSVSQ 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAATTTG GATGGTGTTC AATCCATGTT ACATGGATTA CATTTGTATT TGCATTCGTT CAATGCGTTC ATGCTCAGCT TAGCCCCAAT TTTTACCAGA GTACATGCCC CAATGTCACC  AGTATAGTGG GGCAGGTCAT CCAGCAAGCT CTGCAAAATG ATTCAAGGAT AGCGGCCTCT CTCCTTCGTT TGCATTTTCA TGACTGCTTT GTTAATGTAA GTAGTCATAT GTCTGTTTAC  TGAATAGATT TGTATTCAGT ACATCTTAAA GGGATTTATA ATACTGAAAG TTCATTTGCT CATTGATTTT AAGGGCTGTG ATGGATCCAT TCTCTTGGAT GACACGGCCA ATTTTACTGG  GGAGAAGACA GCAATTCCTA ACAACAATTC CCTGAGGGGC TTTGACGTGG TGGACAACAT CAAGTCGGCA GTAGAGAGCG CATGCAACGG AACAGTTTCT TGTGCAGACA TTCTTGCCAT  AGCTGCAGAG CAGTCAGTAG TATTGGTCTG TATGAAGATT ATAGCCATAG CCATTTATTT GAGTTAATGT TTTTCTTTTA ATTAATTGAA AAATAGTCCT TAATCTCTCT AACAGTTAAT  TTTGGAATTA GTTTTTACAA CATGAACTCT AAAACTCCTG AAAATGAAGA TATATATATA GAAGTTGTGT AACATGATCA TCATAACAAT TAAATGGTGC AGTCTGGCGG TCCATCCTGG  AGTGTGCAGT TAGGAAGACG GGATAGCACC ACTGTCAATG CAACTCTTCC AAACACAGCC ATCCCTGCAC CAACTGACAA CCTCTCCTTA ATTATAACGA AGTTCCAGGA TGTGGGACTT  TCGGTAACGG ATGTAGTTGC TTTGTCAGGT ATTTATCAAT TTGTTTTTCA ACAATTTTGG TGTAAATTTC AACCGTGAGG AAGATCTTTG ACTTCCAAAT TGATTTTAAC ACATATCCAG  ATAAAAAGGA AGCAAACAAA CCCAATTGAT TTAACTTAAC GTTAATAGAT TTCTTCAATT GTGCAAATTT ACATAGTAAA GCTATTAAAA TCCATTTTAT ACCATGCCTT CTCCTTTGTG  ACAGTCATTT CATAGAGTCT ATGCCTTTTC CTTTGTTACA GCCATTTCAT AGATTCAAAG TCTTCCATGT ATGTATTAAT CTTTGTTACA GCCATTTCAT AGATTCAAAG TCTTCCATGT  ATGTATTAAT TTATTGGTTA ATGGATCCAG GGGCGCACAC AATCGGACGA GCTCGCTGCA CAGTGTTCAT CAGTAGACTT TACAATTTCA ACGGAACGGG CAATCCGGAT CCGACACTGA  ATTCATCTTA TCTATCCACC TTGCAAAGCA CGTGCCCACA GAATGGTAGC GGAAACACCC TAACCCCACT AGATCCGACC ACTCTAGACA CCTTCGACAA TAACTACTTC GGTAATCTCC  AAAATAACAT GGGACTTCTA CAGTCAGATC AAGAACTGCT TTCCACAGCC GGGGCAAGCA CGATTTCTAT CGTGACTGAC TACAGCAGTA GTCAAACCCA TTTTTTCTCC AACTTCTCCA  ACTCGATGAT AAACATGGGA AACATAAGTC CTCTAACGGG AACCAGCGGA GAAATCCGCT TAAATTGCAG GAAAGTCAAT AGCAATCAGA ATCGGGCTAG CGAATCGTTG TCTCAATCTG 
TTTCTAATTT GCTCAACGTC ATAGAGCAGT ATCAATCTGT TTCACAGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAATTTG GATGGTGTTC AATCCATGTT ACATGGATTA CATTTGTATT TGCATTCGTT CAATGCGTTC ATGCTCAGCT TAGCCCCAAT TTTTACCAGA GTACATGCCC CAATGTCACC  AGTATAGTGG GGCAGGTCAT CCAGCAAGCT CTGCAAAATG ATTCAAGGAT AGCGGCCTCT CTCCTTCGTT TGCATTTTCA TGACTGCTTT GTTAATGGCT GTGATGGATC CATTCTCTTG  GATGACACGG CCAATTTTAC TGGGGAGAAG ACAGCAATTC CTAACAACAA TTCCCTGAGG GGCTTTGACG TGGTGGACAA CATCAAGTCG GCAGTAGAGA GCGCATGCAA CGGAACAGTT  TCTTGTGCAG ACATTCTTGC CATAGCTGCA GAGCAGTCAG TAGTATTGTC TGGCGGTCCA TCCTGGAGTG TGCAGTTAGG AAGACGGGAT AGCACCACTG TCAATGCAAC TCTTCCAAAC  ACAGCCATCC CTGCACCAAC TGACAACCTC TCCTTAATTA TAACGAAGTT CCAGGATGTG GGACTTTCGG TAACGGATGT AGTTGCTTTG TCAGGGGCGC ACACAATCGG ACGAGCTCGC  TGCACAGTGT TCATCAGTAG ACTTTACAAT TTCAACGGAA CGGGCAATCC GGATCCGACA CTGAATTCAT CTTATCTATC CACCTTGCAA AGCACGTGCC CACAGAATGG TAGCGGAAAC  ACCCTAACCC CACTAGATCC GACCACTCTA GACACCTTCG ACAATAACTA CTTCGGTAAT CTCCAAAATA ACATGGGACT TCTACAGTCA GATCAAGAAC TGCTTTCCAC AGCCGGGGCA  AGCACGATTT CTATCGTGAC TGACTACAGC AGTAGTCAAA CCCATTTTTT CTCCAACTTC TCCAACTCGA TGATAAACAT GGGAAACATA AGTCCTCTAA CGGGAACCAG CGGAGAAATC 
CGCTTAAATT GCAGGAAAGT CAATAGCAAT CAGAATCGGG CTAGCGAATC GTTGTCTCAA TCTGTTTCTA ATTTGCTCAA CGTCATAGAG CAGTATCAAT CTGTTTCACA GTGA 

Retrieve as FASTA