Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
318 (294) |
PWM (Da): |
33916.03 (31326.6) |
|
PI (pH):
| 8.49 (8.49) |
Peptide Signal:
| cut: 25 range:25-318 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKTLACIIPI VLFIICSIPN IVHGQLTSTF YSESCPRALS IVQAAVEQAV AKERRMGASL LRLHFHDCFV NGCDGSILLD DNSTFTGEKT ATPNNNSVRG YDVIDTIKTQ VEAACSGVVS
CADIVAIAAR DSVVALGGPT WTVLLGRRDS TTASFSAANS SIPSPASNLS TLISSFRSHN LSPKDLVALS GAHTIGQARC TSFRARIYNE SNIDTSLATA VKPKCPRTGG DNTLSPLDLA
TPITFDKHYY CNLRSKKGLL HSDQQLFNGG STDSQVTTYS TNQNNFFTDF AAAMVNMGNI KPLTGTSGQI RRNCRKSN
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic and RNA seq. Incorrect prediction (5' is missing). |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGACTC TTGCATGCAT TATTCCCATC GTACTGTTTA TTATATGCTC CATTCCTAAC ATTGTGCATG GGCAGCTGAC CTCAACATTT TATAGTGAAT CGTGTCCGAG GGCACTGTCA
ATAGTGCAAG CCGCAGTTGA GCAAGCGGTC GCCAAAGAGA GAAGGATGGG GGCGTCCTTG CTCCGCCTTC ACTTCCACGA TTGCTTCGTC AATGTAAGAG AATTTCGCCG GGTTTACTTG
AATTAACTAA TCTCAGACCC CTTTTACTTT ATCCCTCGTG TTGAGTTTTG GTTTGGTTTT TCTACAGGGG TGCGATGGCT CTATACTGTT GGACGATAAC TCAACGTTTA CCGGAGAAAA
GACTGCAACT CCAAATAATA ATTCCGTCAG AGGATATGAC GTAATAGACA CCATCAAAAC TCAAGTGGAA GCAGCCTGCA GTGGTGTCGT GTCGTGTGCA GATATTGTTG CCATCGCTGC
ACGTGATTCA GTCGTCGCAG TAATTATCAA TTCCTTTCTT CTCTTTTCGA TTTCTTTAAC CATTCCTATA TACAACAATA TCTCATTTTA TCATGGCAGA AATATGGAAT CAAATAACGT
TTTTCGCTCG TTAATGATTT CAATCTGTTA GCTGGGAGGC CCAACATGGA CAGTACTGCT AGGAAGGCGA GACTCCACGA CTGCGAGTTT TAGCGCTGCA AACAGCAGCA TTCCGTCTCC
CGCTTCCAAT CTGAGCACAC TCATCTCATC TTTTCGAAGT CACAATCTTT CTCCCAAGGA TCTCGTAGCA CTCTCAGGTA GAATATCACT CATGCTACAA TTTCCATTTG CTTGTAATGT
GGATTGGTTG TCTCGTCCGT AAAACATTTA CGTCAAAAAG AATTAATCTT TCCTTGTTTA ATAGCTATAG AATTAAAATG GATCTTCATT TATATTTTCA AATATTTAAT CCTTATCAAA
AATTAAAAAT ATATCTACGT TCGTACATAT ATCATAACAG AATGAAAGCA GACATATCCA ATCTACATAA TAAAGTGTAA CAGTTATAAT GAGGTTTTAT TAATTTACAT GTTAAAGTGT
AACAGTTATC ATGCGGTTTT ATTACTGCAG GTGCACATAC AATTGGGCAA GCTCGGTGCA CCTCATTCAG AGCTCGCATC TACAACGAAT CCAACATTGA CACTTCGCTC GCCACTGCTG
TGAAGCCAAA ATGCCCAAGG ACTGGTGGCG ACAACACCCT CTCGCCTTTA GATCTGGCCA CCCCTATCAC ATTCGACAAA CACTATTACT GTAATTTGAG AAGCAAAAAG GGACTTCTCC
ACTCTGATCA GCAACTATTT AATGGAGGTT CTACAGATTC TCAGGTCACT ACCTACAGCA CTAATCAGAA CAACTTCTTT ACGGACTTCG CAGCTGCCAT GGTGAATATG GGTAATATCA
AACCCCTCAC TGGCACCAGC GGACAAATCC GCAGAAACTG CAGGAAGTCT AATTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGACTC TTGCATGCAT TATTCCCATC GTACTGTTTA TTATATGCTC CATTCCTAAC ATTGTGCATG GGCAGCTGAC CTCAACATTT TATAGTGAAT CGTGTCCGAG GGCACTGTCA
ATAGTGCAAG CCGCAGTTGA GCAAGCGGTC GCCAAAGAGA GAAGGATGGG GGCGTCCTTG CTCCGCCTTC ACTTCCACGA TTGCTTCGTC AATGGGTGCG ATGGCTCTAT ACTGTTGGAC
GATAACTCAA CGTTTACCGG AGAAAAGACT GCAACTCCAA ATAATAATTC CGTCAGAGGA TATGACGTAA TAGACACCAT CAAAACTCAA GTGGAAGCAG CCTGCAGTGG TGTCGTGTCG
TGTGCAGATA TTGTTGCCAT CGCTGCACGT GATTCAGTCG TCGCACTGGG AGGCCCAACA TGGACAGTAC TGCTAGGAAG GCGAGACTCC ACGACTGCGA GTTTTAGCGC TGCAAACAGC
AGCATTCCGT CTCCCGCTTC CAATCTGAGC ACACTCATCT CATCTTTTCG AAGTCACAAT CTTTCTCCCA AGGATCTCGT AGCACTCTCA GGTGCACATA CAATTGGGCA AGCTCGGTGC
ACCTCATTCA GAGCTCGCAT CTACAACGAA TCCAACATTG ACACTTCGCT CGCCACTGCT GTGAAGCCAA AATGCCCAAG GACTGGTGGC GACAACACCC TCTCGCCTTT AGATCTGGCC
ACCCCTATCA CATTCGACAA ACACTATTAC TGTAATTTGA GAAGCAAAAA GGGACTTCTC CACTCTGATC AGCAACTATT TAATGGAGGT TCTACAGATT CTCAGGTCAC TACCTACAGC
ACTAATCAGA ACAACTTCTT TACGGACTTC GCAGCTGCCA TGGTGAATAT GGGTAATATC AAACCCCTCA CTGGCACCAG CGGACAAATC CGCAGAAACT GCAGGAAGTC TAATTAA
|
Retrieve as FASTA
|
|