Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
358 (330) |
PWM (Da): |
37619.53 (35027.1) |
Transmb domain: |
i13-35o |
PI (pH):
| 8.01 (7.75) |
Peptide Signal:
| cut: 29 range:29-358 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSPSPSAA RALLVLAAAA LVLSSVSAAA GSPPLAKGLS FDFYSAKCPQ AESIVFSFLK DAVRKDVGLA AALLRIHFHD CFVQGCDGSV LLDKTNGVDS EKVSPPNVTL RPSAFKAINA
IRALLQRACG GPVVSCADIA ALAARDSVHL AGGPRYAVPL GRRDGLAPAS LDTILGALPP PTSKVPVLLS FLAKIGPNAA GLVALSGAHT LGIAHCGSFE ERLFPKDDPT MDKFFAGHLK
LTCPRLKVDN FTANDIRTPD VFDNKFYVDL LNRQGLFTSD QDLHTDAKTK PMVTRFAVDQ AAFFDQFVKS MVKMGQINVL TGNQGQIRTD CSVPNAARSA GDELPWSVVE TAVESLVL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (no intron). Incorrect prediction from NCBI: the first exon (the first 55 aa) is incorrect due to undetermined nt in the sequence together with frame shift between SEKV and SSPPNV . |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTT CTCCCTCTCC CTCGGCTGCT CGTGCCCTGC TCGTCCTCGC CGCAGCAGCT CTGGTGCTGA GCTCTGTGTC AGCCGCGGCT GGCTCGCCGC CGCTTGCCAA GGGCCTGTCG
TTCGACTTCT ACAGCGCCAA GTGCCCGCAG GCGGAGTCCA TCGTCTTCTC CTTCCTCAAG GACGCCGTCC GCAAGGACGT CGGCCTCGCC GCGGCGCTCC TCCGCATCCA CTTCCACGAC
TGCTTCGTGC AGGGCTGCGA CGGCTCCGTG CTCCTCGACA AGACCAACGG CGTCGACAGC GAGAAGGTGT CTCCTCCGAA CGTCACGCTC CGTCCGTCCG CGTTCAAGGC CATCAACGCC
ATCCGCGCGC TCCTCCAGAG GGCGTGCGGC GGGCCCGTGG TCTCCTGCGC CGACATCGCC GCGCTCGCCG CCCGCGACTC CGTCCACCTG GCCGGCGGGC CGAGGTACGC CGTCCCGCTC
GGCCGCCGTG ACGGGCTCGC CCCCGCGTCC CTGGACACCA TCCTGGGCGC GCTCCCGCCG CCGACCTCCA AGGTCCCCGT GCTCCTCAGC TTCCTCGCCA AGATCGGCCC CAACGCCGCC
GGCCTGGTAG CGCTCTCCGG CGCGCACACG CTCGGGATCG CGCACTGCGG CTCCTTCGAG GAGAGGCTGT TCCCCAAGGA CGACCCCACC ATGGACAAGT TTTTCGCCGG CCACCTCAAG
CTCACCTGCC CGCGGCTCAA GGTGGACAAC TTCACCGCCA ACGACATCCG CACGCCTGAC GTGTTCGACA ACAAGTTCTA CGTCGACCTG CTCAACCGGC AGGGTCTCTT CACCTCCGAC
CAGGACCTGC ACACCGACGC CAAGACCAAG CCCATGGTCA CCAGGTTCGC CGTCGACCAG GCCGCCTTCT TCGACCAGTT CGTCAAGTCC ATGGTGAAAA TGGGGCAGAT CAACGTGCTC
ACTGGCAACC AGGGTCAGAT CCGCACGGAC TGCTCCGTGC CCAACGCCGC CCGCAGTGCC GGCGACGAGC TGCCGTGGTC CGTCGTCGAG ACCGCCGTGG AGAGCTTGGT GTTGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTT CTCCCTCTCC CTCGGCTGCT CGTGCCCTGC TCGTCCTCGC CGCAGCAGCT CTGGTGCTGA GCTCTGTGTC AGCCGCGGCT GGCTCGCCGC CGCTTGCCAA GGGCCTGTCG
TTCGACTTCT ACAGCGCCAA GTGCCCGCAG GCGGAGTCCA TCGTCTTCTC CTTCCTCAAG GACGCCGTCC GCAAGGACGT CGGCCTCGCC GCGGCGCTCC TCCGCATCCA CTTCCACGAC
TGCTTCGTGC AGGGCTGCGA CGGCTCCGTG CTCCTCGACA AGACCAACGG CGTCGACAGC GAGAAGGTGT CTCCTCCGAA CGTCACGCTC CGTCCGTCCG CGTTCAAGGC CATCAACGCC
ATCCGCGCGC TCCTCCAGAG GGCGTGCGGC GGGCCCGTGG TCTCCTGCGC CGACATCGCC GCGCTCGCCG CCCGCGACTC CGTCCACCTG GCCGGCGGGC CGAGGTACGC CGTCCCGCTC
GGCCGCCGTG ACGGGCTCGC CCCCGCGTCC CTGGACACCA TCCTGGGCGC GCTCCCGCCG CCGACCTCCA AGGTCCCCGT GCTCCTCAGC TTCCTCGCCA AGATCGGCCC CAACGCCGCC
GGCCTGGTAG CGCTCTCCGG CGCGCACACG CTCGGGATCG CGCACTGCGG CTCCTTCGAG GAGAGGCTGT TCCCCAAGGA CGACCCCACC ATGGACAAGT TTTTCGCCGG CCACCTCAAG
CTCACCTGCC CGCGGCTCAA GGTGGACAAC TTCACCGCCA ACGACATCCG CACGCCTGAC GTGTTCGACA ACAAGTTCTA CGTCGACCTG CTCAACCGGC AGGGTCTCTT CACCTCCGAC
CAGGACCTGC ACACCGACGC CAAGACCAAG CCCATGGTCA CCAGGTTCGC CGTCGACCAG GCCGCCTTCT TCGACCAGTT CGTCAAGTCC ATGGTGAAAA TGGGGCAGAT CAACGTGCTC
ACTGGCAACC AGGGTCAGAT CCGCACGGAC TGCTCCGTGC CCAACGCCGC CCGCAGTGCC GGCGACGAGC TGCCGTGGTC CGTCGTCGAG ACCGCCGTGG AGAGCTTGGT GTTGTAG
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Retrieve as FASTA
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