Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
623 |
| PWM (Da): |
69809.95 |
Transmb domain: |
o128-145i217-239o272-294i301-323o333-355i |
| PI (pH): |
8.7 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSGKLHSAFV QEATPTVLEF HGDPPKSNQA AAVFAIIDKL HRGTLTHAQL VEAMRSTAAK CKLTLYGDVE GLLSTLLHGQ KSVSVDQFVE NVNAIANGEH IFRPTVMDPQ RPQMAQGWSR
YQPPSAPMVI WWLLYAALNA AVFTWKFNQY EQRRSAFNLS GYSICVARAA AQVNLLNGFF LLWPVLTRVH YVVSKVSPAL ASSLQLQHRT GFHIAYGVMF YISGWIHVLG QCLSIFYAIP
HASNATWAKS ALSHSIDFAG QPKPDPMDFV LSLPGWTGVI MTLCSFVATS LKIIYWKSHS VIWNKWAHGF DLVMFFLTFV HGIHHWLEPA QAITFLGVPT VLYIVVEVFP RYYCTVTQTL
TKYTKTAHAL TLYLPKTQRF DGCLPGTFLR LNVPALSRSE WHPFSITGQD EHYVIVHIQP CGDWTRQLYE VVHPNLYVRI DGPIPAPAVD VVEYPVVVLI GAGFGVTPYM SVLQHQMKIP
SGQIIYLHWM SNKQEMFRSY ANLLEGASSL PTVHIQTYLT GDYTKSRPDE TKLLKLVQVL AHVQQDVDLV TGLSLANPTK LGRPQWHSTL MSIMQKHPNT LIGIFFCGPP ALKTALAQTI
RQVEMECNQE GNSVKTAFHP EVF*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no intron). Scaffold35:7179..9050 (- strand) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACASSSnCST nSCADSTRAn DATGAGCGGC AAGTTGCACA GCGCATTCGT CCAAGAGGCG ACCCCAACTG TCTTGGAATT CCACGGCGAC CCTCCGAAAT CAAACCAGGC GGCGGCTGTC
TTTGCCATCA TCGACAAATT GCACCGTGGA ACGTTGACTC ATGCTCAGCT TGTGGAAGCG ATGCGATCGA CAGCTGCAAA GTGTAAACTG ACCCTGTATG GTGACGTGGA GGGCCTTCTT
TCAACACTCC TCCATGGTCA AAAAAGTGTG TCTGTCGATC AGTTCGTGGA AAATGTCAAT GCGATCGCGA ACGGAGAACA TATCTTTCGT CCGACTGTGA TGGATCCTCA ACGACCTCAA
ATGGCCCAAG GATGGAGCAG ATACCAACCA CCATCGGCGC CTATGGTGAT CTGGTGGCTT CTCTATGCAG CTCTCAATGC GGCCGTGTTC ACGTGGAAAT TCAATCAGTA CGAGCAACGC
CGATCTGCGT TCAATTTGTC GGGCTATTCC ATTTGCGTGG CACGAGCAGC AGCCCAAGTG AATCTCCTCA ACGGCTTTTT CCTTCTTTGG CCAGTCCTTA CTCGTGTCCA TTACGTTGTG
TCCAAGGTGA GCCCAGCTTT GGCATCCTCC CTTCAGCTCC AGCATCGCAC TGGGTTTCAC ATTGCTTACG GAGTCATGTT TTACATATCT GGCTGGATTC ATGTGCTTGG CCAATGCTTG
AGTATTTTCT ACGCCATTCC CCATGCTTCC AATGCAACTT GGGCCAAGTC TGCGCTCTCC CATTCCATCG ACTTTGCAGG ACAGCCCAAA CCCGATCCCA TGGACTTTGT GCTCTCCCTC
CCTGGCTGGA CTGGTGTGAT CATGACCTTG TGCAGTTTCG TCGCAACTAG CCTGAAGATC ATCTACTGGA AGTCGCACAG CGTAATTTGG AACAAATGGG CTCATGGCTT TGACTTGGTC
ATGTTTTTCT TGACATTTGT GCATGGCATC CACCACTGGC TCGAACCTGC TCAAGCAATT ACGTTTTTGG GCGTCCCAAC CGTGCTTTAC ATCGTTGTTG AAGTCTTTCC CCGCTATTAT
TGCACGGTCA CACAAACCTT GACCAAGTAT ACCAAAACTG CCCACGCACT CACGTTGTAT TTACCAAAGA CACAACGTTT TGATGGATGT CTACCTGGCA CATTCCTTCG TCTCAATGTC
CCTGCGCTTA GCCGGTCTGA GTGGCACCCC TTTAGCATCA CGGGGCAGGA TGAGCACTAT GTGATTGTGC ACATTCAGCC TTGCGGAGAC TGGACGAGAC AGCTCTACGA AGTTGTGCAT
CCAAATCTGT ACGTCCGGAT CGACGGACCA ATTCCAGCCC CAGCAGTCGA TGTTGTGGAG TATCCCGTGG TTGTCTTGAT CGGAGCTGGC TTTGGTGTGA CTCCATACAT GTCCGTGCTA
CAGCATCAAA TGAAAATCCC ATCAGGACAA ATAATTTATT TACACTGGAT GTCCAACAAG CAAGAAATGT TCCGTTCGTA TGCGAATCTC CTCGAAGGGG CGTCTAGCTT ACCCACAGTG
CATATTCAAA CCTACTTGAC GGGGGACTAT ACAAAATCCC GTCCTGACGA GACCAAGTTG CTCAAACTTG TCCAAGTGCT AGCTCATGTT CAACAAGATG TCGATTTGGT GACAGGTCTC
TCATTGGCAA ACCCAACCAA ATTGGGACGC CCTCAGTGGC ATTCTACCCT GATGAGCATC ATGCAGAAGC ATCCGAACAC CCTCATCGGA ATTTTTTTCT GTGGACCCCC TGCTCTTAAA
ACCGCATTAG CACAAACAAT CCGCCAAGTC GAAATGGAAT GCAATCAAGA AGGAAATTCT GTTAAGACAG CTTTCCATCC TGAGGTGTTT TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCGGCA AGTTGCACAG CGCATTCGTC CAAGAGGCGA CCCCAACTGT CTTGGAATTC CACGGCGACC CTCCGAAATC AAACCAGGCG GCGGCTGTCT TTGCCATCAT CGACAAATTG
CACCGTGGAA CGTTGACTCA TGCTCAGCTT GTGGAAGCGA TGCGATCGAC AGCTGCAAAG TGTAAACTGA CCCTGTATGG TGACGTGGAG GGCCTTCTTT CAACACTCCT CCATGGTCAA
AAAAGTGTGT CTGTCGATCA GTTCGTGGAA AATGTCAATG CGATCGCGAA CGGAGAACAT ATCTTTCGTC CGACTGTGAT GGATCCTCAA CGACCTCAAA TGGCCCAAGG ATGGAGCAGA
TACCAACCAC CATCGGCGCC TATGGTGATC TGGTGGCTTC TCTATGCAGC TCTCAATGCG GCCGTGTTCA CGTGGAAATT CAATCAGTAC GAGCAACGCC GATCTGCGTT CAATTTGTCG
GGCTATTCCA TTTGCGTGGC ACGAGCAGCA GCCCAAGTGA ATCTCCTCAA CGGCTTTTTC CTTCTTTGGC CAGTCCTTAC TCGTGTCCAT TACGTTGTGT CCAAGGTGAG CCCAGCTTTG
GCATCCTCCC TTCAGCTCCA GCATCGCACT GGGTTTCACA TTGCTTACGG AGTCATGTTT TACATATCTG GCTGGATTCA TGTGCTTGGC CAATGCTTGA GTATTTTCTA CGCCATTCCC
CATGCTTCCA ATGCAACTTG GGCCAAGTCT GCGCTCTCCC ATTCCATCGA CTTTGCAGGA CAGCCCAAAC CCGATCCCAT GGACTTTGTG CTCTCCCTCC CTGGCTGGAC TGGTGTGATC
ATGACCTTGT GCAGTTTCGT CGCAACTAGC CTGAAGATCA TCTACTGGAA GTCGCACAGC GTAATTTGGA ACAAATGGGC TCATGGCTTT GACTTGGTCA TGTTTTTCTT GACATTTGTG
CATGGCATCC ACCACTGGCT CGAACCTGCT CAAGCAATTA CGTTTTTGGG CGTCCCAACC GTGCTTTACA TCGTTGTTGA AGTCTTTCCC CGCTATTATT GCACGGTCAC ACAAACCTTG
ACCAAGTATA CCAAAACTGC CCACGCACTC ACGTTGTATT TACCAAAGAC ACAACGTTTT GATGGATGTC TACCTGGCAC ATTCCTTCGT CTCAATGTCC CTGCGCTTAG CCGGTCTGAG
TGGCACCCCT TTAGCATCAC GGGGCAGGAT GAGCACTATG TGATTGTGCA CATTCAGCCT TGCGGAGACT GGACGAGACA GCTCTACGAA GTTGTGCATC CAAATCTGTA CGTCCGGATC
GACGGACCAA TTCCAGCCCC AGCAGTCGAT GTTGTGGAGT ATCCCGTGGT TGTCTTGATC GGAGCTGGCT TTGGTGTGAC TCCATACATG TCCGTGCTAC AGCATCAAAT GAAAATCCCA
TCAGGACAAA TAATTTATTT ACACTGGATG TCCAACAAGC AAGAAATGTT CCGTTCGTAT GCGAATCTCC TCGAAGGGGC GTCTAGCTTA CCCACAGTGC ATATTCAAAC CTACTTGACG
GGGGACTATA CAAAATCCCG TCCTGACGAG ACCAAGTTGC TCAAACTTGT CCAAGTGCTA GCTCATGTTC AACAAGATGT CGATTTGGTG ACAGGTCTCT CATTGGCAAA CCCAACCAAA
TTGGGACGCC CTCAGTGGCA TTCTACCCTG ATGAGCATCA TGCAGAAGCA TCCGAACACC CTCATCGGAA TTTTTTTCTG TGGACCCCCT GCTCTTAAAA CCGCATTAGC ACAAACAATC
CGCCAAGTCG AAATGGAATG CAATCAAGAA GGAAATTCTG TTAAGACAGC TTTCCATCCT GAGGTGTTTT AA
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Retrieve as FASTA
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