Entry information : CpslAPx-R (Cp-comp7622_c0_seq)
Entry ID 12937
Creation 2014-09-04 (Christophe Dunand)
Last sequence changes 2014-09-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-09-04 (Christophe Dunand)
Peroxidase information: CpslAPx-R (Cp-comp7622_c0_seq)
Name (synonym) CpslAPx-R (Cp-comp7622_c0_seq)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Zygnemophyceae Closteriaceae Closterium
Organism Closterium peracerosum-strigosum-littorale    [TaxId: 34146 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpslAPx-R
start..stop
S start..stop
MbraAPx-R01 253 1e-86 1..192 37..228
BrAPx-R-1Aa_other 248 3e-83 1..192 134..324
BoAPx-R-1Ca_other 248 4e-83 1..192 132..322
InAPx-R01 248 6e-83 1..192 148..337
Literature and cross-references CpslAPx-R (Cp-comp7622_c0_seq)
Protein sequence: CpslAPx-R (Cp-comp7622_c0_seq)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   193
PWM (Da):   %s   20976.56  
PI (pH):   %s   5.72
Sequence
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Send to Peroxiscan
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MNGSVRFELQ RPENDGLKRT IKVLEKVRLE LGPLAKVVSW ADLMAVAGAH AVESCGGPHI PVRMGRKDAS GPDPENRMPA ETLNAKEVAA SFKTKGFSLQ ETVCLLGAHT LGGKGFGDPT 
SFDNAYYSIL LTKPWLDTSN SMADMLGLPS DRAIVDDDDC LVWINKYAND QNLFFRDFVP AYTKLVNSGA VWT 

Retrieve as FASTA  
Remarks Complete sequence from RNa seq
CDS
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ATGAACGGGT CCGTTCGTTT TGAGTTGCAA CGGCCAGAGA ACGACGGGCT CAAGCGCACC ATCAAGGTGC TGGAGAAGGT TCGCCTGGAG CTGGGGCCCC TGGCTAAAGT GGTGTCATGG  GCGGATCTCA TGGCAGTGGC CGGGGCACAT GCGGTGGAGT CGTGTGGCGG GCCGCACATC CCAGTGCGCA TGGGCAGGAA GGACGCCAGC GGCCCCGACC CCGAGAACCG AATGCCAGCA  GAGACGCTCA ACGCCAAGGA GGTGGCTGCC AGCTTCAAGA CAAAGGGCTT CAGCCTGCAA GAGACGGTGT GTTTGCTGGG AGCACACACG CTAGGGGGGA AGGGCTTTGG CGACCCTACC  AGCTTTGACA ATGCGTACTA CTCGATTCTT CTTACCAAGC CTTGGCTCGA CACGAGCAAC AGCATGGCGG ACATGCTTGG ACTGCCGTCG GATAGAGCAA TAGTGGACGA TGATGACTGC 
CTCGTGTGGA TCAACAAGTA CGCCAACGAC CAGAACCTCT TTTTCCGAGA CTTTGTGCCG GCTTACACCA AGCTGGTCAA CAGTGGGGCC GTGTGGACAT GA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGCAGCAGCA GCAGCAGCAG GAGTAGCGAA TCGGACGCCA AGCCGTCGAA TGCGGTCAGC CGTCGATCGC TGCTCGCCGT GTCGCTATCT GCGGCGACGT TGGCCCCTCT CCTCTCGCCG  TCGCTCCCCT CGTTCAGTCT CTTGTCTCCA GCACTCGCTG CTGACGTGGA TCTGTCCCCT GCTGAGCTGG AAGCGGCGGT GCGGCGAGCA GTGGCGAAGG TGGTAACCAG AGCCAAGGCA  CCGGGCGCTC TGAGGATAGT GTTTCACGAC GCCGGCACAT ACGACCTGGC TACCAACACA GGTGGCATGA ACGGGTCCGT TCGTTTTGAG TTGCAACGGC CAGAGAACGA CGGGCTCAAG  CGCACCATCA AGGTGCTGGA GAAGGTTCGC CTGGAGCTGG GGCCCCTGGC TAAAGTGGTG TCATGGGCGG ATCTCATGGC AGTGGCCGGG GCACATGCGG TGGAGTCGTG TGGCGGGCCG  CACATCCCAG TGCGCATGGG CAGGAAGGAC GCCAGCGGCC CCGACCCCGA GAACCGAATG CCAGCAGAGA CGCTCAACGC CAAGGAGGTG GCTGCCAGCT TCAAGACAAA GGGCTTCAGC  CTGCAAGAGA CGGTGTGTTT GCTGGGAGCA CACACGCTAG GGGGGAAGGG CTTTGGCGAC CCTACCAGCT TTGACAATGC GTACTACTCG ATTCTTCTTA CCAAGCCTTG GCTCGACACG  AGCAACAGCA TGGCGGACAT GCTTGGACTG CCGTCGGATA GAGCAATAGT GGACGATGAT GACTGCCTCG TGTGGATCAA CAAGTACGCC AACGACCAGA ACCTCTTTTT CCGAGACTTT  GTGCCGGCTT ACACCAAGCT GGTCAACAGT GGGGCCGTGT GGACATGACT AGGGCAACAG CGGATCTGTG TGGGCCGTGT GCCTAGAGCG CTTCTAGACT GTTCTTCCAA GAGACGTTGT  GGTGGCTTGC TCCAAGATGG TCAAGAGTGG TGTCGTGCGG CGTGGGCGTG AGGCATTGGG GACTTTGCCT GCAATTGATT CTTGGTTGGC ACACTTGGGA AGTTTTTGCT ATTATTTTAT 
AGGGCAAACC AAACCACCAC CCCAACCATG TGTTGTTAGT CTCAGAGTAG AAGATTGAGT AGAATGTGTG ATACAGGGTA GTTTTGTCTA AGGGGTTGTA CTCTCTATAA GAC 

Retrieve as FASTA