Entry information : CbraGPx01 (g78796.t1)
Entry ID 12943
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2016-06-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-06-08 (Christophe Dunand)
Peroxidase information: CbraGPx01 (g78796.t1)
Name (synonym) CbraGPx01 (g78796.t1)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2004]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraGPx01
start..stop
S start..stop
CbraGPx03 455 1e-164 1..250 33..286
SpraGPx04 167 4e-52 1..203 8..200
CpslGPx02 166 1e-51 34..228 2..194
SsGPx04_AU1 159 8e-49 9..203 2..200
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 342163..342915 753  
join(342163..342915)


exon

Literature and cross-references CbraGPx01 (g78796.t1)
Protein sequence: CbraGPx01 (g78796.t1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250 (222)
PWM (Da):   %s   27324.14 (24241.4) Transmb domain:   %s   o4-23i
PI (pH):   %s   4.47 (4.40) Peptide Signal:   %s   cut: 29 range:29-250
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVSIVPLWIL FLTFLSALLL GSLPQCRAMS FYDLEAVNID GYRVKLSAYK GKVTLVVNVA SKCGLTDRTY KELVSVRESY ARRGFEVLAF PCNQFHDQEP DSNADIKGFA RSYNVTFPLF  AKTTVKRPMC THDPSANSLL CGPTSEECCA FNNQIYEYLM SISNKPVEWN FAKFLIGRDG GLIKRYQPVE GPRTFTREIE RALASADTGD GDGDGDGDGD GDGDGDEDDM SHGSSDGGSN 
PTTESFSDEM 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCTCTA TAGTCCCTCT TTGGATTCTA TTCTTAACAT TTCTGTCGGC TCTGCTCCTG GGCTCCTTGC CGCAGTGTAG GGCCATGAGC TTCTACGATC TCGAGGCTGT TAATATTGAC  GGATACCGTG TAAAGCTGAG CGCCTACAAG GGCAAAGTCA CGTTAGTGGT CAATGTGGCC AGCAAGTGCG GGCTGACAGA TAGAACGTAC AAGGAACTGG TCAGTGTGAG AGAGAGCTAT  GCAAGGAGAG GATTCGAGGT GCTGGCGTTT CCCTGCAACC AATTCCACGA CCAAGAACCT GATTCCAACG CCGATATCAA GGGCTTCGCT CGCAGTTATA ATGTCACTTT CCCGCTGTTT  GCCAAAACGA CGGTAAAGCG GCCCATGTGC ACACACGACC CTTCTGCGAA CTCTCTTCTC TGCGGGCCAA CGTCAGAAGA GTGTTGTGCC TTCAACAACC AGATTTACGA GTACCTCATG  AGCATTTCCA ATAAGCCCGT CGAGTGGAAC TTCGCCAAAT TCTTGATTGG CAGAGATGGC GGGCTTATCA AAAGGTATCA ACCGGTGGAG GGTCCTCGTA CGTTCACGCG GGAGATCGAA  AGAGCACTTG CTTCTGCAGA CACCGGAGAT GGAGATGGAG ACGGAGACGG AGATGGAGAC GGAGACGGGG ACGGGGACGA GGACGACATG TCGCACGGAT CTAGCGATGG TGGCTCCAAT 
CCGACGACGG AATCGTTTTC AGATGAAATG TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCTCTA TAGTCCCTCT TTGGATTCTA TTCTTAACAT TTCTGTCGGC TCTGCTCCTG GGCTCCTTGC CGCAGTGTAG GGCCATGAGC TTCTACGATC TCGAGGCTGT TAATATTGAC  GGATACCGTG TAAAGCTGAG CGCCTACAAG GGCAAAGTCA CGTTAGTGGT CAATGTGGCC AGCAAGTGCG GGCTGACAGA TAGAACGTAC AAGGAACTGG TCAGTGTGAG AGAGAGCTAT  GCAAGGAGAG GATTCGAGGT GCTGGCGTTT CCCTGCAACC AATTCCACGA CCAAGAACCT GATTCCAACG CCGATATCAA GGGCTTCGCT CGCAGTTATA ATGTCACTTT CCCGCTGTTT  GCCAAAACGA CGGTAAAGCG GCCCATGTGC ACACACGACC CTTCTGCGAA CTCTCTTCTC TGCGGGCCAA CGTCAGAAGA GTGTTGTGCC TTCAACAACC AGATTTACGA GTACCTCATG  AGCATTTCCA ATAAGCCCGT CGAGTGGAAC TTCGCCAAAT TCTTGATTGG CAGAGATGGC GGGCTTATCA AAAGGTATCA ACCGGTGGAG GGTCCTCGTA CGTTCACGCG GGAGATCGAA  AGAGCACTTG CTTCTGCAGA CACCGGAGAT GGAGATGGAG ACGGAGACGG AGATGGAGAC GGAGACGGGG ACGGGGACGA GGACGACATG TCGCACGGAT CTAGCGATGG TGGCTCCAAT 
CCGACGACGG AATCGTTTTC AGATGAAATG TGA 

Retrieve as FASTA