Entry information : CbraPrx01 (g50468.t1/CHBRA832g00090)
Entry ID 12944
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2016-07-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-07-28 (Christophe Dunand)
Peroxidase information: CbraPrx01 (g50468.t1/CHBRA832g00090)
Name (synonym) CbraPrx01 (g50468.t1/CHBRA832g00090)
Class Class III peroxidase    [Orthogroup: Prx061]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraPrx01
start..stop
S start..stop
CbraPrx03 252 5e-81 64..381 48..378
CbraPrx06 244 2e-78 65..381 46..365
CbraPrx04 244 4e-78 65..381 45..364
CbraPrx08 243 7e-78 77..381 69..375
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 219548..220705 1158  
complement(join(219548..220705))


exon

Literature and cross-references CbraPrx01 (g50468.t1/CHBRA832g00090)
Protein sequence: CbraPrx01 (g50468.t1/CHBRA832g00090)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   385 (348)
PWM (Da):   %s   41897.9 (37606.5)  
PI (pH):   %s   10 (9.85) Peptide Signal:   %s   cut: 38 range:38-385
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNRRVTWRSG LRKALLLQLL LTVWWLICLS DLCVVAAKEE ESEVVHHVIT ISGKRRASGR LPFSSSSSSS SSSKPKYAST AVKGKIDYSL YLPSDHDCLL VAIRSTAGAM FRKNAGLAAA  ALRLGFHDCM TKGGGCDASV LTAGEMAHPI NRRLKVMVGV INEIQRRAAE ACKVVPTKAD TIAAAVIASA EFYGLSCARY CPFKLGRRDV HPSSKGDDPG TLPSVTDSVS IVLEKMGSLG  FSPKEVALYS LGSHSIGQAS CFLFEDRLNK RQCRLPRDER LDNGRACDLV KVCAAKRNQL VPFDYITPTK LDTNYLKLVL QRQGLLRIDQ DFGDDARTAG VVRQYASGKG ERSFHGDYLQ 
VLVKSLSIGI NGPKSVAPRK YRLTT 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (scaffold_832, no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATAGGA GGGTGACATG GCGATCGGGC TTGAGGAAAG CCCTGCTGCT TCAGCTCCTG CTCACTGTCT GGTGGCTGAT ATGTCTGTCT GACTTGTGTG TGGTGGCAGC GAAGGAGGAA  GAATCAGAAG TGGTGCATCA CGTAATAACG ATCTCTGGTA AAAGAAGAGC CTCAGGACGA TTGCCCTTCT CTTCCTCCTC CTCCTCCTCC TCCTCCTCGA AACCGAAATA TGCCTCGACG  GCTGTTAAGG GGAAGATAGA CTACAGTCTC TACCTGCCCT CCGATCACGA CTGCCTGCTG GTAGCGATCA GGAGCACAGC GGGTGCAATG TTTCGCAAGA ATGCAGGTTT AGCTGCTGCG  GCCTTGCGAC TGGGCTTTCA CGACTGCATG ACCAAGGGTG GGGGTTGCGA TGCCTCCGTG CTGACGGCTG GAGAGATGGC ACACCCGATT AATCGACGGC TGAAGGTGAT GGTTGGAGTG  ATCAACGAGA TCCAGCGGCG GGCGGCCGAG GCATGCAAGG TGGTCCCCAC CAAGGCTGAC ACCATCGCAG CTGCGGTGAT AGCTTCTGCG GAGTTCTACG GGCTGTCTTG TGCTCGCTAC  TGCCCTTTCA AACTCGGACG TCGGGATGTC CATCCCTCCA GCAAGGGTGA CGATCCCGGC ACGCTCCCTT CCGTGACAGA CTCAGTCTCC ATCGTTCTCG AGAAGATGGG ATCCCTTGGA  TTCAGTCCCA AGGAGGTTGC ATTGTACTCT TTGGGGAGCC ACAGCATCGG ACAGGCATCC TGCTTTCTGT TCGAAGATCG GCTGAATAAG AGGCAGTGCA GGCTGCCGCG TGACGAGAGG  CTAGACAATG GCCGGGCATG TGATCTGGTG AAGGTGTGCG CTGCAAAACG AAATCAGTTG GTGCCGTTCG ACTACATCAC ACCGACTAAA TTGGACACGA ATTACCTCAA GCTCGTTTTG  CAGCGTCAGG GGCTTCTCAG GATCGATCAG GATTTCGGCG ATGACGCCAG AACGGCCGGC GTCGTACGTC AGTACGCATC CGGGAAGGGC GAGCGATCGT TCCATGGCGA TTACCTCCAA 
GTGCTGGTGA AGTCGCTGTC GATAGGAATA AACGGACCGA AATCAGTAGC TCCTCGCAAG TACCGTTTGA CAACGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATAGGA GGGTGACATG GCGATCGGGC TTGAGGAAAG CCCTGCTGCT TCAGCTCCTG CTCACTGTCT GGTGGCTGAT ATGTCTGTCT GACTTGTGTG TGGTGGCAGC GAAGGAGGAA  GAATCAGAAG TGGTGCATCA CGTAATAACG ATCTCTGGTA AAAGAAGAGC CTCAGGACGA TTGCCCTTCT CTTCCTCCTC CTCCTCCTCC TCCTCCTCGA AACCGAAATA TGCCTCGACG  GCTGTTAAGG GGAAGATAGA CTACAGTCTC TACCTGCCCT CCGATCACGA CTGCCTGCTG GTAGCGATCA GGAGCACAGC GGGTGCAATG TTTCGCAAGA ATGCAGGTTT AGCTGCTGCG  GCCTTGCGAC TGGGCTTTCA CGACTGCATG ACCAAGGGTG GGGGTTGCGA TGCCTCCGTG CTGACGGCTG GAGAGATGGC ACACCCGATT AATCGACGGC TGAAGGTGAT GGTTGGAGTG  ATCAACGAGA TCCAGCGGCG GGCGGCCGAG GCATGCAAGG TGGTCCCCAC CAAGGCTGAC ACCATCGCAG CTGCGGTGAT AGCTTCTGCG GAGTTCTACG GGCTGTCTTG TGCTCGCTAC  TGCCCTTTCA AACTCGGACG TCGGGATGTC CATCCCTCCA GCAAGGGTGA CGATCCCGGC ACGCTCCCTT CCGTGACAGA CTCAGTCTCC ATCGTTCTCG AGAAGATGGG ATCCCTTGGA  TTCAGTCCCA AGGAGGTTGC ATTGTACTCT TTGGGGAGCC ACAGCATCGG ACAGGCATCC TGCTTTCTGT TCGAAGATCG GCTGAATAAG AGGCAGTGCA GGCTGCCGCG TGACGAGAGG  CTAGACAATG GCCGGGCATG TGATCTGGTG AAGGTGTGCG CTGCAAAACG AAATCAGTTG GTGCCGTTCG ACTACATCAC ACCGACTAAA TTGGACACGA ATTACCTCAA GCTCGTTTTG  CAGCGTCAGG GGCTTCTCAG GATCGATCAG GATTTCGGCG ATGACGCCAG AACGGCCGGC GTCGTACGTC AGTACGCATC CGGGAAGGGC GAGCGATCGT TCCATGGCGA TTACCTCCAA 
GTGCTGGTGA AGTCGCTGTC GATAGGAATA AACGGACCGA AATCAGTAGC TCCTCGCAAG TACCGTTTGA CAACGTGA 

Retrieve as FASTA