Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
385 (348) |
| PWM (Da): |
41897.9 (37606.5) |
|
| PI (pH):
| 10 (9.85) |
Peptide Signal:
| cut: 38 range:38-385 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MNRRVTWRSG LRKALLLQLL LTVWWLICLS DLCVVAAKEE ESEVVHHVIT ISGKRRASGR LPFSSSSSSS SSSKPKYAST AVKGKIDYSL YLPSDHDCLL VAIRSTAGAM FRKNAGLAAA
ALRLGFHDCM TKGGGCDASV LTAGEMAHPI NRRLKVMVGV INEIQRRAAE ACKVVPTKAD TIAAAVIASA EFYGLSCARY CPFKLGRRDV HPSSKGDDPG TLPSVTDSVS IVLEKMGSLG
FSPKEVALYS LGSHSIGQAS CFLFEDRLNK RQCRLPRDER LDNGRACDLV KVCAAKRNQL VPFDYITPTK LDTNYLKLVL QRQGLLRIDQ DFGDDARTAG VVRQYASGKG ERSFHGDYLQ
VLVKSLSIGI NGPKSVAPRK YRLTT
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq and genomic (scaffold_832, no intron). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAATAGGA GGGTGACATG GCGATCGGGC TTGAGGAAAG CCCTGCTGCT TCAGCTCCTG CTCACTGTCT GGTGGCTGAT ATGTCTGTCT GACTTGTGTG TGGTGGCAGC GAAGGAGGAA
GAATCAGAAG TGGTGCATCA CGTAATAACG ATCTCTGGTA AAAGAAGAGC CTCAGGACGA TTGCCCTTCT CTTCCTCCTC CTCCTCCTCC TCCTCCTCGA AACCGAAATA TGCCTCGACG
GCTGTTAAGG GGAAGATAGA CTACAGTCTC TACCTGCCCT CCGATCACGA CTGCCTGCTG GTAGCGATCA GGAGCACAGC GGGTGCAATG TTTCGCAAGA ATGCAGGTTT AGCTGCTGCG
GCCTTGCGAC TGGGCTTTCA CGACTGCATG ACCAAGGGTG GGGGTTGCGA TGCCTCCGTG CTGACGGCTG GAGAGATGGC ACACCCGATT AATCGACGGC TGAAGGTGAT GGTTGGAGTG
ATCAACGAGA TCCAGCGGCG GGCGGCCGAG GCATGCAAGG TGGTCCCCAC CAAGGCTGAC ACCATCGCAG CTGCGGTGAT AGCTTCTGCG GAGTTCTACG GGCTGTCTTG TGCTCGCTAC
TGCCCTTTCA AACTCGGACG TCGGGATGTC CATCCCTCCA GCAAGGGTGA CGATCCCGGC ACGCTCCCTT CCGTGACAGA CTCAGTCTCC ATCGTTCTCG AGAAGATGGG ATCCCTTGGA
TTCAGTCCCA AGGAGGTTGC ATTGTACTCT TTGGGGAGCC ACAGCATCGG ACAGGCATCC TGCTTTCTGT TCGAAGATCG GCTGAATAAG AGGCAGTGCA GGCTGCCGCG TGACGAGAGG
CTAGACAATG GCCGGGCATG TGATCTGGTG AAGGTGTGCG CTGCAAAACG AAATCAGTTG GTGCCGTTCG ACTACATCAC ACCGACTAAA TTGGACACGA ATTACCTCAA GCTCGTTTTG
CAGCGTCAGG GGCTTCTCAG GATCGATCAG GATTTCGGCG ATGACGCCAG AACGGCCGGC GTCGTACGTC AGTACGCATC CGGGAAGGGC GAGCGATCGT TCCATGGCGA TTACCTCCAA
GTGCTGGTGA AGTCGCTGTC GATAGGAATA AACGGACCGA AATCAGTAGC TCCTCGCAAG TACCGTTTGA CAACGTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAATAGGA GGGTGACATG GCGATCGGGC TTGAGGAAAG CCCTGCTGCT TCAGCTCCTG CTCACTGTCT GGTGGCTGAT ATGTCTGTCT GACTTGTGTG TGGTGGCAGC GAAGGAGGAA
GAATCAGAAG TGGTGCATCA CGTAATAACG ATCTCTGGTA AAAGAAGAGC CTCAGGACGA TTGCCCTTCT CTTCCTCCTC CTCCTCCTCC TCCTCCTCGA AACCGAAATA TGCCTCGACG
GCTGTTAAGG GGAAGATAGA CTACAGTCTC TACCTGCCCT CCGATCACGA CTGCCTGCTG GTAGCGATCA GGAGCACAGC GGGTGCAATG TTTCGCAAGA ATGCAGGTTT AGCTGCTGCG
GCCTTGCGAC TGGGCTTTCA CGACTGCATG ACCAAGGGTG GGGGTTGCGA TGCCTCCGTG CTGACGGCTG GAGAGATGGC ACACCCGATT AATCGACGGC TGAAGGTGAT GGTTGGAGTG
ATCAACGAGA TCCAGCGGCG GGCGGCCGAG GCATGCAAGG TGGTCCCCAC CAAGGCTGAC ACCATCGCAG CTGCGGTGAT AGCTTCTGCG GAGTTCTACG GGCTGTCTTG TGCTCGCTAC
TGCCCTTTCA AACTCGGACG TCGGGATGTC CATCCCTCCA GCAAGGGTGA CGATCCCGGC ACGCTCCCTT CCGTGACAGA CTCAGTCTCC ATCGTTCTCG AGAAGATGGG ATCCCTTGGA
TTCAGTCCCA AGGAGGTTGC ATTGTACTCT TTGGGGAGCC ACAGCATCGG ACAGGCATCC TGCTTTCTGT TCGAAGATCG GCTGAATAAG AGGCAGTGCA GGCTGCCGCG TGACGAGAGG
CTAGACAATG GCCGGGCATG TGATCTGGTG AAGGTGTGCG CTGCAAAACG AAATCAGTTG GTGCCGTTCG ACTACATCAC ACCGACTAAA TTGGACACGA ATTACCTCAA GCTCGTTTTG
CAGCGTCAGG GGCTTCTCAG GATCGATCAG GATTTCGGCG ATGACGCCAG AACGGCCGGC GTCGTACGTC AGTACGCATC CGGGAAGGGC GAGCGATCGT TCCATGGCGA TTACCTCCAA
GTGCTGGTGA AGTCGCTGTC GATAGGAATA AACGGACCGA AATCAGTAGC TCCTCGCAAG TACCGTTTGA CAACGTGA
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Retrieve as FASTA
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