Entry information : CbraPrx03 (g50464.t1/CHBRA832g00050)
Entry ID 12946
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2016-07-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-07-28 (Christophe Dunand)
Peroxidase information: CbraPrx03 (g50464.t1/CHBRA832g00050)
Name (synonym) CbraPrx03 (g50464.t1/CHBRA832g00050)
Class Class III peroxidase    [Orthogroup: Prx058]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraPrx03
start..stop
S start..stop
CbraPrx02 417 6e-144 50..384 123..490
CbraPrx14 417 7e-144 50..384 123..490
CbraPrx04 259 4e-84 57..379 53..365
CbraPrx06 256 6e-83 29..379 27..366
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 120515..121690 1176  
complement(join(120515..121690)


exon

Literature and cross-references CbraPrx03 (g50464.t1/CHBRA832g00050)
Protein sequence: CbraPrx03 (g50464.t1/CHBRA832g00050)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   391
PWM (Da):   %s   42391.37  
PI (pH):   %s   8.9
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAGRSFRKS TAPRGGVSYG DRLRTLLPLV CIAMLFLIGT SDMRHVASEC TSRGGGPQPT YEKKPKEGQI DRSLYAADDR ACLVGALREA TIAVLEDDRS LAAKFLRLSF HDCMTKREQA  TGRILGACDA SILLPREISH PVNDGLRAAV PLISKIRRCA AQACNNVVPT KADTIAAAAA ASIAWSGLCH PAQYGFTIGR RDRDPECTGD DPMTLPSATE TLGSVLEKLS ASGSLDRKES  TVFTIGSHSI GCSSCDNFSF RLNSRTCSRP ADQTLDPRRA CKLTRTCLQC AADKQPNIVA PFDYITPFKL DNAYFKITLM NKGLLRTDHA FAHDPRTAPY VKFYAHNEGS FKKDFMEVFV 
KVSVVGINHS KTVVPKDYYD CKSGGKGAFS A 

Retrieve as FASTA  
Remarks Complete sequence from RNa seq and genomic (scaffold_832, no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAG GTAGATCTTT TCGGAAATCG ACGGCTCCGA GAGGAGGGGT AAGCTATGGT GATCGACTGC GCACCCTTCT CCCGTTGGTG TGTATTGCGA TGCTGTTCTT GATTGGGACG  TCAGACATGC GACACGTGGC GAGCGAATGT ACGTCCCGTG GTGGGGGACC ACAGCCTACG TACGAGAAGA AACCGAAGGA GGGGCAGATC GATCGCTCTC TGTACGCTGC TGACGATCGA  GCTTGTCTTG TCGGTGCTCT GCGCGAAGCC ACCATCGCGG TGCTGGAGGA CGACCGGTCG CTGGCCGCCA AGTTCCTCAG GCTGTCGTTC CACGACTGCA TGACGAAGAG AGAGCAGGCG  ACCGGTCGCA TCCTGGGGGC GTGCGATGCC TCCATCCTCC TGCCGCGAGA GATCTCCCAC CCGGTCAACG ACGGCCTACG GGCGGCCGTT CCTCTCATCT CCAAGATCCG ACGGTGCGCA  GCGCAGGCGT GTAATAATGT GGTCCCCACC AAAGCCGACA CGATCGCGGC CGCCGCCGCT GCGTCCATAG CCTGGTCGGG GCTGTGTCAT CCAGCTCAGT ACGGCTTTAC CATCGGTCGT  CGCGATCGCG ACCCCGAATG CACGGGCGAC GACCCGATGA CGCTCCCGAG CGCGACCGAG ACTCTGGGCT CCGTTCTGGA AAAGCTCAGC GCGTCGGGAT CTCTGGATCG CAAGGAATCG  ACGGTCTTCA CGATCGGAAG TCACAGCATC GGATGCTCAT CATGCGATAA TTTCTCGTTC CGATTGAATA GCCGAACTTG CAGCAGGCCC GCTGACCAGA CTTTGGACCC TCGGCGCGCT  TGCAAGCTGA CAAGGACCTG TCTGCAGTGC GCCGCCGACA AGCAACCGAA CATAGTCGCT CCCTTTGACT ACATAACTCC TTTCAAACTG GATAATGCCT ACTTCAAGAT CACCCTGATG  AACAAGGGAT TGTTGAGGAC GGATCACGCC TTCGCACACG ACCCCAGAAC AGCACCGTAC GTGAAGTTCT ATGCTCACAA CGAGGGCTCC TTTAAGAAAG ATTTCATGGA GGTCTTTGTC 
AAAGTCAGCG TGGTCGGTAT CAACCATAGC AAGACCGTCG TTCCAAAAGA TTACTACGAC TGCAAATCCG GTGGCAAAGG AGCGTTTTCG GCATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAG GTAGATCTTT TCGGAAATCG ACGGCTCCGA GAGGAGGGGT AAGCTATGGT GATCGACTGC GCACCCTTCT CCCGTTGGTG TGTATTGCGA TGCTGTTCTT GATTGGGACG  TCAGACATGC GACACGTGGC GAGCGAATGT ACGTCCCGTG GTGGGGGACC ACAGCCTACG TACGAGAAGA AACCGAAGGA GGGGCAGATC GATCGCTCTC TGTACGCTGC TGACGATCGA  GCTTGTCTTG TCGGTGCTCT GCGCGAAGCC ACCATCGCGG TGCTGGAGGA CGACCGGTCG CTGGCCGCCA AGTTCCTCAG GCTGTCGTTC CACGACTGCA TGACGAAGAG AGAGCAGGCG  ACCGGTCGCA TCCTGGGGGC GTGCGATGCC TCCATCCTCC TGCCGCGAGA GATCTCCCAC CCGGTCAACG ACGGCCTACG GGCGGCCGTT CCTCTCATCT CCAAGATCCG ACGGTGCGCA  GCGCAGGCGT GTAATAATGT GGTCCCCACC AAAGCCGACA CGATCGCGGC CGCCGCCGCT GCGTCCATAG CCTGGTCGGG GCTGTGTCAT CCAGCTCAGT ACGGCTTTAC CATCGGTCGT  CGCGATCGCG ACCCCGAATG CACGGGCGAC GACCCGATGA CGCTCCCGAG CGCGACCGAG ACTCTGGGCT CCGTTCTGGA AAAGCTCAGC GCGTCGGGAT CTCTGGATCG CAAGGAATCG  ACGGTCTTCA CGATCGGAAG TCACAGCATC GGATGCTCAT CATGCGATAA TTTCTCGTTC CGATTGAATA GCCGAACTTG CAGCAGGCCC GCTGACCAGA CTTTGGACCC TCGGCGCGCT  TGCAAGCTGA CAAGGACCTG TCTGCAGTGC GCCGCCGACA AGCAACCGAA CATAGTCGCT CCCTTTGACT ACATAACTCC TTTCAAACTG GATAATGCCT ACTTCAAGAT CACCCTGATG  AACAAGGGAT TGTTGAGGAC GGATCACGCC TTCGCACACG ACCCCAGAAC AGCACCGTAC GTGAAGTTCT ATGCTCACAA CGAGGGCTCC TTTAAGAAAG ATTTCATGGA GGTCTTTGTC 
AAAGTCAGCG TGGTCGGTAT CAACCATAGC AAGACCGTCG TTCCAAAAGA TTACTACGAC TGCAAATCCG GTGGCAAAGG AGCGTTTTCG GCATAG 

Retrieve as FASTA