Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
366 (330) |
PWM (Da): |
39136.9 (35197.0) |
Transmb domain: |
i21-43o |
PI (pH):
| 8.71 (8.48) |
Peptide Signal:
| cut: 37 range:37-366 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDHRWSSVRG APGGGRARFM LFVCLLCCLC FRSAVGQATV VVVQSGGSSH RPPPPVCASS PTQGVIDPTL YHPHDAACLM KSIKKYSYQE FLKDRPMAAS LLRLSFHDCL TKGGGCDASI
LKPGEITDPN NINEGLRITV PVITRIRQRA AEECGVYPTM ADAIARAGAA AIAFSGLADP TTAGFLLGRR DIADNQPGDD ARTLPDALEP LDNILTKLTG FGLSLREVTV FSLGGHSVGK
SACSHFNFRL NNGSTPGGCQ KPVDPTLDPA LACKLAKVCG DPNADVKFDF GTPFSLDNNY FKLLLKHQAL LRTDQAFATH SGTASFVREY ANGPKRFAKD FLKAFVKVEL VSINGPTTAP
PKKYYY
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Retrieve as FASTA
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Remarks |
Complete sequence from RNA seq and genomic (scaffold_670, no intron). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCATC GGTGGAGTTC CGTTCGAGGA GCACCAGGAG GAGGACGGGC TCGTTTTATG TTATTCGTTT GTCTTCTTTG TTGCTTGTGC TTTCGCTCCG CGGTTGGTCA GGCGACGGTC
GTGGTGGTAC AGAGCGGAGG GAGTTCGCAT CGCCCTCCTC CTCCCGTGTG TGCTTCCAGC CCGACGCAGG GTGTCATCGA TCCTACTCTT TATCACCCTC ACGATGCAGC ATGTCTTATG
AAGTCCATCA AGAAGTACTC TTATCAGGAA TTTCTCAAGG ACAGGCCCAT GGCTGCCTCG CTGTTGCGGC TCTCCTTCCA CGATTGCTTG ACCAAGGGTG GCGGCTGCGA TGCGTCCATT
CTGAAGCCTG GCGAGATCAC GGATCCGAAT AACATCAACG AAGGACTGCG GATTACGGTG CCAGTCATCA CCAGGATTCG ACAGCGAGCG GCGGAGGAGT GCGGTGTGTA CCCGACGATG
GCGGACGCCA TAGCCAGAGC TGGCGCTGCT GCCATCGCCT TCTCTGGCCT TGCCGATCCC ACTACCGCCG GTTTCCTGCT GGGGAGACGG GACATTGCCG ACAATCAGCC TGGTGATGAC
GCCAGAACTC TGCCCGATGC TCTCGAGCCG CTCGATAACA TTCTCACAAA GCTTACAGGT TTCGGGTTGT CCTTGAGAGA AGTGACCGTT TTCTCTCTCG GAGGGCACAG TGTGGGCAAA
TCCGCCTGCT CTCACTTCAA CTTCAGACTC AACAACGGGA GCACGCCGGG CGGCTGCCAG AAACCGGTGG ACCCGACCCT CGATCCCGCC TTGGCCTGCA AGCTGGCGAA GGTCTGTGGG
GATCCGAACG CCGACGTGAA GTTTGACTTC GGGACGCCAT TTTCGCTGGA CAACAACTAC TTCAAGCTGC TGTTAAAACA TCAAGCTCTG CTGCGGACAG ATCAAGCGTT TGCAACCCAC
TCGGGGACAG CAAGCTTCGT CCGGGAATAC GCTAACGGAC CGAAACGGTT CGCGAAAGAT TTCCTGAAAG CCTTTGTCAA GGTGGAGCTT GTGAGCATCA ACGGTCCGAC CACTGCGCCG
CCGAAGAAGT ACTATTACTG A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCATC GGTGGAGTTC CGTTCGAGGA GCACCAGGAG GAGGACGGGC TCGTTTTATG TTATTCGTTT GTCTTCTTTG TTGCTTGTGC TTTCGCTCCG CGGTTGGTCA GGCGACGGTC
GTGGTGGTAC AGAGCGGAGG GAGTTCGCAT CGCCCTCCTC CTCCCGTGTG TGCTTCCAGC CCGACGCAGG GTGTCATCGA TCCTACTCTT TATCACCCTC ACGATGCAGC ATGTCTTATG
AAGTCCATCA AGAAGTACTC TTATCAGGAA TTTCTCAAGG ACAGGCCCAT GGCTGCCTCG CTGTTGCGGC TCTCCTTCCA CGATTGCTTG ACCAAGGGTG GCGGCTGCGA TGCGTCCATT
CTGAAGCCTG GCGAGATCAC GGATCCGAAT AACATCAACG AAGGACTGCG GATTACGGTG CCAGTCATCA CCAGGATTCG ACAGCGAGCG GCGGAGGAGT GCGGTGTGTA CCCGACGATG
GCGGACGCCA TAGCCAGAGC TGGCGCTGCT GCCATCGCCT TCTCTGGCCT TGCCGATCCC ACTACCGCCG GTTTCCTGCT GGGGAGACGG GACATTGCCG ACAATCAGCC TGGTGATGAC
GCCAGAACTC TGCCCGATGC TCTCGAGCCG CTCGATAACA TTCTCACAAA GCTTACAGGT TTCGGGTTGT CCTTGAGAGA AGTGACCGTT TTCTCTCTCG GAGGGCACAG TGTGGGCAAA
TCCGCCTGCT CTCACTTCAA CTTCAGACTC AACAACGGGA GCACGCCGGG CGGCTGCCAG AAACCGGTGG ACCCGACCCT CGATCCCGCC TTGGCCTGCA AGCTGGCGAA GGTCTGTGGG
GATCCGAACG CCGACGTGAA GTTTGACTTC GGGACGCCAT TTTCGCTGGA CAACAACTAC TTCAAGCTGC TGTTAAAACA TCAAGCTCTG CTGCGGACAG ATCAAGCGTT TGCAACCCAC
TCGGGGACAG CAAGCTTCGT CCGGGAATAC GCTAACGGAC CGAAACGGTT CGCGAAAGAT TTCCTGAAAG CCTTTGTCAA GGTGGAGCTT GTGAGCATCA ACGGTCCGAC CACTGCGCCG
CCGAAGAAGT ACTATTACTG A
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Retrieve as FASTA
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