Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
368 (324) |
| PWM (Da): |
38923.6 (34373.5) |
|
| PI (pH):
| 6.83 (5.94) |
Peptide Signal:
| cut: 45 range:45-368 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDHLSTSAFW CSGGEGRGRG GGGGSRRRAL CLFYCLCFSA AVVAAQTAGA PAARRPPPVY AANPTNGVID SSLYHPPDAQ CLLAAIKKAA SAIIVSDRTK AATLLRLVFH DCMTTGGGCE
ASILSDGEIN NPVNADLKRV VADIHTIRDQ AGRECGVLPT LADTIARAAA AAVTFGGLND VASSGFRLGR RDLAPGQPGN DPTTLPNENQ SLDAILSLFA TFGLTDEESI VWAIGGHSIG
VADCDHFKAR LSTDISSPGC LQPADPTLDP ALACRLAQQC SIQDIRLPFD FVTPFALDTS YFQLLLKNQG LLKTDQAFAV HPRTSDSVRQ YANTPGLFRV DFLRAFVKVS LFNVNSPQTA
PPTQYYYP
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq and genomic (scaffold_670, one intron in 3' has been removed) |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCATC TGTCGACTTC TGCGTTTTGG TGTTCGGGAG GAGAGGGCCG GGGAAGAGGA GGAGGAGGAG GTAGTCGCCG ACGCGCCCTC TGCCTGTTTT ATTGTTTGTG TTTCTCTGCG
GCCGTGGTCG CTGCCCAGAC TGCCGGCGCT CCGGCTGCTA GACGTCCTCC TCCGGTGTAC GCTGCTAACC CGACGAACGG TGTCATCGAT TCTTCTCTTT ACCATCCTCC AGATGCGCAG
TGCCTTCTCG CAGCAATCAA GAAGGCTGCT TCCGCGATAA TCGTGAGCGA TCGGACGAAG GCTGCGACGC TGTTGCGACT CGTTTTCCAC GACTGCATGA CGACGGGCGG CGGCTGCGAG
GCGTCTATTC TGAGCGATGG CGAGATCAAC AATCCCGTCA ACGCCGACTT GAAGAGGGTG GTCGCTGACA TCCACACCAT TCGAGACCAG GCAGGAAGAG AATGCGGCGT GCTTCCGACG
TTGGCGGACA CCATAGCCAG AGCTGCCGCT GCGGCCGTCA CCTTCGGCGG CCTCAACGAT GTCGCTTCGT CTGGGTTCCG ACTAGGACGA CGGGACCTCG CTCCCGGTCA GCCTGGCAAT
GATCCGACTA CGTTGCCAAA CGAGAACCAA TCATTGGACG CCATTTTGTC ATTGTTTGCT ACCTTCGGCT TAACCGACGA GGAGAGCATC GTGTGGGCCA TAGGAGGCCA CAGTATCGGG
GTTGCCGATT GCGACCATTT CAAGGCGCGA TTGAGCACTG ACATCTCCTC TCCCGGCTGC TTGCAGCCGG CGGATCCGAC GCTCGATCCC GCTCTGGCTT GCAGATTGGC TCAACAGTGC
AGCATCCAAG ATATCCGCTT GCCCTTCGAC TTTGTGACTC CTTTCGCTCT GGATACCAGC TACTTCCAGC TGCTGCTGAA GAACCAAGGG CTTCTGAAAA CAGATCAAGC GTTCGCTGTC
CATCCCCGAA CGTCAGATTC CGTACGCCAG TACGCCAATA CGCCTGGACT ATTCAGGGTA GACTTCCTCA GGGCGTTCGT CAAGGTATCG CTCTTTAATG TCAACAGCCC CCAAACTGCG
CCGCCGACCC AGTATTATTA CCCTTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCATC TGTCGACTTC TGCGTTTTGG TGTTCGGGAG GAGAGGGCCG GGGAAGAGGA GGAGGAGGAG GTAGTCGCCG ACGCGCCCTC TGCCTGTTTT ATTGTTTGTG TTTCTCTGCG
GCCGTGGTCG CTGCCCAGAC TGCCGGCGCT CCGGCTGCTA GACGTCCTCC TCCGGTGTAC GCTGCTAACC CGACGAACGG TGTCATCGAT TCTTCTCTTT ACCATCCTCC AGATGCGCAG
TGCCTTCTCG CAGCAATCAA GAAGGCTGCT TCCGCGATAA TCGTGAGCGA TCGGACGAAG GCTGCGACGC TGTTGCGACT CGTTTTCCAC GACTGCATGA CGACGGGCGG CGGCTGCGAG
GCGTCTATTC TGAGCGATGG CGAGATCAAC AATCCCGTCA ACGCCGACTT GAAGAGGGTG GTCGCTGACA TCCACACCAT TCGAGACCAG GCAGGAAGAG AATGCGGCGT GCTTCCGACG
TTGGCGGACA CCATAGCCAG AGCTGCCGCT GCGGCCGTCA CCTTCGGCGG CCTCAACGAT GTCGCTTCGT CTGGGTTCCG ACTAGGACGA CGGGACCTCG CTCCCGGTCA GCCTGGCAAT
GATCCGACTA CGTTGCCAAA CGAGAACCAA TCATTGGACG CCATTTTGTC ATTGTTTGCT ACCTTCGGCT TAACCGACGA GGAGAGCATC GTGTGGGCCA TAGGAGGCCA CAGTATCGGG
GTTGCCGATT GCGACCATTT CAAGGCGCGA TTGAGCACTG ACATCTCCTC TCCCGGCTGC TTGCAGCCGG CGGATCCGAC GCTCGATCCC GCTCTGGCTT GCAGATTGGC TCAACAGTGC
AGCATCCAAG ATATCCGCTT GCCCTTCGAC TTTGTGACTC CTTTCGCTCT GGATACCAGC TACTTCCAGC TGCTGCTGAA GAACCAAGGG CTTCTGAAAA CAGATCAAGC GTTCGCTGTC
CATCCCCGAA CGTCAGATTC CGTACGCCAG TACGCCAATA CGCCTGGACT ATTCAGGGTA GACTTCCTCA GGGCGTTCGT CAAGGTATCG CTCTTTAATG TCAACAGCCC CCAAACTGCG
CCGCCGACCC AGTATTATTA CCCTTAG
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Retrieve as FASTA
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