Entry information : CbraPrx07 (g46332.t1//CHBRA670g00080)
Entry ID 12950
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2016-07-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-07-28 (Christophe Dunand)
Peroxidase information: CbraPrx07 (g46332.t1//CHBRA670g00080)
Name (synonym) CbraPrx07 (g46332.t1//CHBRA670g00080)
Class Class III peroxidase    [Orthogroup: Prx061]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraPrx07
start..stop
S start..stop
CbraPrx11 589 0 1..368 1..373
CbraPrx08 580 0 1..368 1..378
CbraPrx05 555 0 1..368 1..368
CbraPrx12 424 8e-149 1..368 1..369
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 257311..258417 1107  
join(257311..258417)


exon

Literature and cross-references CbraPrx07 (g46332.t1//CHBRA670g00080)
Protein sequence: CbraPrx07 (g46332.t1//CHBRA670g00080)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   368 (323)
PWM (Da):   %s   39071.69 (34547.6) Transmb domain:   %s   i27-49o
PI (pH):   %s   7.95 (7.98) Peptide Signal:   %s   cut: 46 range:46-368
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDRLSRSAFW CSGGEGRGGG GEGGSRLYAV CLFCCLCLSA AVVAAQTAGA PVARPPPPMY ASNPTKGVID SSLYYPADAQ CLMAAIKKFA TAVIVRDRTK AATLLRLVFH DCMTTGGGCE  ASILSDGEIN NPVNADLKRV VPDINTIRDQ AGRECGVLPT LADTIARAAA AAVTFTGLND VVSSGFQLGR RDLAPNQPGN EPTTLPNENQ SLDAILTLFA TFGLTAKEST VWAIGGHSIG  VADCAHFSSR LSNVSTFPGC LRPADPTLDP SLACRLARQC SIQDIRLPFD FVTPFSLDTS YFQLLLKKQG LLKSDQAFSA HPRTSAFIRQ YATFPGLFSG DFLKAFVKVS LFNVNSPQTA 
PPTQYYYP 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (scaffold_670, no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGTC TGTCGAGGTC TGCGTTTTGG TGTTCGGGAG GAGAGGGCCG GGGAGGAGGA GGAGAAGGAG GTAGTCGCCT ATACGCCGTC TGCCTGTTTT GTTGTTTGTG TCTCTCGGCG  GCGGTGGTCG CTGCCCAGAC TGCCGGCGCT CCGGTTGCTA GACCTCCTCC TCCGATGTAC GCTTCAAACC CCACCAAAGG TGTTATCGAT TCTTCTCTTT ACTATCCTGC AGATGCACAG  TGTCTTATGG CAGCTATCAA GAAGTTCGCT ACCGCCGTAA TCGTGCGCGA TCGGACGAAG GCTGCGACGC TGTTGCGACT CGTTTTCCAC GACTGCATGA CGACGGGCGG CGGCTGCGAG  GCGTCTATTC TGAGCGATGG CGAGATCAAC AATCCCGTCA ACGCCGACTT GAAGAGAGTG GTCCCTGACA TCAACACCAT TCGAGACCAG GCGGGAAGAG AATGCGGCGT GCTTCCGACG  TTGGCGGACA CCATAGCCAG AGCTGCCGCT GCCGCCGTCA CCTTCACCGG CCTCAACGAT GTCGTTTCCT CTGGGTTCCA ATTGGGACGA CGGGACCTCG CTCCCAATCA GCCTGGCAAT  GAACCGACTA CTTTGCCGAA CGAGAACCAG TCATTGGACG CCATTTTGAC ATTGTTTGCT ACCTTCGGCT TAACCGCCAA GGAGAGCACC GTGTGGGCCA TAGGAGGCCA CAGTATCGGG  GTTGCCGATT GCGCCCATTT CAGCTCGCGA TTGAGCAATG TGAGCACTTT TCCCGGCTGC TTGCGGCCGG CGGATCCCAC CCTCGATCCC AGTCTGGCTT GCAGATTGGC TCGACAGTGC  AGCATCCAAG ATATCCGCTT GCCCTTCGAC TTTGTGACTC CTTTCTCCCT GGATACCAGC TACTTCCAGC TGCTGCTGAA GAAACAAGGG CTTCTGAAAT CAGATCAAGC ATTCTCTGCC  CATCCCCGAA CGTCAGCTTT CATACGTCAG TACGCCACTT TCCCTGGACT ATTCAGCGGA GACTTCCTCA AGGCGTTCGT AAAGGTATCG CTCTTTAATG TCAACAGCCC CCAGACTGCG 
CCGCCGACCC AGTATTATTA CCCTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATCGTC TGTCGAGGTC TGCGTTTTGG TGTTCGGGAG GAGAGGGCCG GGGAGGAGGA GGAGAAGGAG GTAGTCGCCT ATACGCCGTC TGCCTGTTTT GTTGTTTGTG TCTCTCGGCG  GCGGTGGTCG CTGCCCAGAC TGCCGGCGCT CCGGTTGCTA GACCTCCTCC TCCGATGTAC GCTTCAAACC CCACCAAAGG TGTTATCGAT TCTTCTCTTT ACTATCCTGC AGATGCACAG  TGTCTTATGG CAGCTATCAA GAAGTTCGCT ACCGCCGTAA TCGTGCGCGA TCGGACGAAG GCTGCGACGC TGTTGCGACT CGTTTTCCAC GACTGCATGA CGACGGGCGG CGGCTGCGAG  GCGTCTATTC TGAGCGATGG CGAGATCAAC AATCCCGTCA ACGCCGACTT GAAGAGAGTG GTCCCTGACA TCAACACCAT TCGAGACCAG GCGGGAAGAG AATGCGGCGT GCTTCCGACG  TTGGCGGACA CCATAGCCAG AGCTGCCGCT GCCGCCGTCA CCTTCACCGG CCTCAACGAT GTCGTTTCCT CTGGGTTCCA ATTGGGACGA CGGGACCTCG CTCCCAATCA GCCTGGCAAT  GAACCGACTA CTTTGCCGAA CGAGAACCAG TCATTGGACG CCATTTTGAC ATTGTTTGCT ACCTTCGGCT TAACCGCCAA GGAGAGCACC GTGTGGGCCA TAGGAGGCCA CAGTATCGGG  GTTGCCGATT GCGCCCATTT CAGCTCGCGA TTGAGCAATG TGAGCACTTT TCCCGGCTGC TTGCGGCCGG CGGATCCCAC CCTCGATCCC AGTCTGGCTT GCAGATTGGC TCGACAGTGC  AGCATCCAAG ATATCCGCTT GCCCTTCGAC TTTGTGACTC CTTTCTCCCT GGATACCAGC TACTTCCAGC TGCTGCTGAA GAAACAAGGG CTTCTGAAAT CAGATCAAGC ATTCTCTGCC  CATCCCCGAA CGTCAGCTTT CATACGTCAG TACGCCACTT TCCCTGGACT ATTCAGCGGA GACTTCCTCA AGGCGTTCGT AAAGGTATCG CTCTTTAATG TCAACAGCCC CCAGACTGCG 
CCGCCGACCC AGTATTATTA CCCTTAG 

Retrieve as FASTA