Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
368 (323) |
| PWM (Da): |
39071.69 (34547.6) |
Transmb domain: |
i27-49o |
| PI (pH):
| 7.95 (7.98) |
Peptide Signal:
| cut: 46 range:46-368 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDRLSRSAFW CSGGEGRGGG GEGGSRLYAV CLFCCLCLSA AVVAAQTAGA PVARPPPPMY ASNPTKGVID SSLYYPADAQ CLMAAIKKFA TAVIVRDRTK AATLLRLVFH DCMTTGGGCE
ASILSDGEIN NPVNADLKRV VPDINTIRDQ AGRECGVLPT LADTIARAAA AAVTFTGLND VVSSGFQLGR RDLAPNQPGN EPTTLPNENQ SLDAILTLFA TFGLTAKEST VWAIGGHSIG
VADCAHFSSR LSNVSTFPGC LRPADPTLDP SLACRLARQC SIQDIRLPFD FVTPFSLDTS YFQLLLKKQG LLKSDQAFSA HPRTSAFIRQ YATFPGLFSG DFLKAFVKVS LFNVNSPQTA
PPTQYYYP
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq and genomic (scaffold_670, no intron). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCGTC TGTCGAGGTC TGCGTTTTGG TGTTCGGGAG GAGAGGGCCG GGGAGGAGGA GGAGAAGGAG GTAGTCGCCT ATACGCCGTC TGCCTGTTTT GTTGTTTGTG TCTCTCGGCG
GCGGTGGTCG CTGCCCAGAC TGCCGGCGCT CCGGTTGCTA GACCTCCTCC TCCGATGTAC GCTTCAAACC CCACCAAAGG TGTTATCGAT TCTTCTCTTT ACTATCCTGC AGATGCACAG
TGTCTTATGG CAGCTATCAA GAAGTTCGCT ACCGCCGTAA TCGTGCGCGA TCGGACGAAG GCTGCGACGC TGTTGCGACT CGTTTTCCAC GACTGCATGA CGACGGGCGG CGGCTGCGAG
GCGTCTATTC TGAGCGATGG CGAGATCAAC AATCCCGTCA ACGCCGACTT GAAGAGAGTG GTCCCTGACA TCAACACCAT TCGAGACCAG GCGGGAAGAG AATGCGGCGT GCTTCCGACG
TTGGCGGACA CCATAGCCAG AGCTGCCGCT GCCGCCGTCA CCTTCACCGG CCTCAACGAT GTCGTTTCCT CTGGGTTCCA ATTGGGACGA CGGGACCTCG CTCCCAATCA GCCTGGCAAT
GAACCGACTA CTTTGCCGAA CGAGAACCAG TCATTGGACG CCATTTTGAC ATTGTTTGCT ACCTTCGGCT TAACCGCCAA GGAGAGCACC GTGTGGGCCA TAGGAGGCCA CAGTATCGGG
GTTGCCGATT GCGCCCATTT CAGCTCGCGA TTGAGCAATG TGAGCACTTT TCCCGGCTGC TTGCGGCCGG CGGATCCCAC CCTCGATCCC AGTCTGGCTT GCAGATTGGC TCGACAGTGC
AGCATCCAAG ATATCCGCTT GCCCTTCGAC TTTGTGACTC CTTTCTCCCT GGATACCAGC TACTTCCAGC TGCTGCTGAA GAAACAAGGG CTTCTGAAAT CAGATCAAGC ATTCTCTGCC
CATCCCCGAA CGTCAGCTTT CATACGTCAG TACGCCACTT TCCCTGGACT ATTCAGCGGA GACTTCCTCA AGGCGTTCGT AAAGGTATCG CTCTTTAATG TCAACAGCCC CCAGACTGCG
CCGCCGACCC AGTATTATTA CCCTTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCGTC TGTCGAGGTC TGCGTTTTGG TGTTCGGGAG GAGAGGGCCG GGGAGGAGGA GGAGAAGGAG GTAGTCGCCT ATACGCCGTC TGCCTGTTTT GTTGTTTGTG TCTCTCGGCG
GCGGTGGTCG CTGCCCAGAC TGCCGGCGCT CCGGTTGCTA GACCTCCTCC TCCGATGTAC GCTTCAAACC CCACCAAAGG TGTTATCGAT TCTTCTCTTT ACTATCCTGC AGATGCACAG
TGTCTTATGG CAGCTATCAA GAAGTTCGCT ACCGCCGTAA TCGTGCGCGA TCGGACGAAG GCTGCGACGC TGTTGCGACT CGTTTTCCAC GACTGCATGA CGACGGGCGG CGGCTGCGAG
GCGTCTATTC TGAGCGATGG CGAGATCAAC AATCCCGTCA ACGCCGACTT GAAGAGAGTG GTCCCTGACA TCAACACCAT TCGAGACCAG GCGGGAAGAG AATGCGGCGT GCTTCCGACG
TTGGCGGACA CCATAGCCAG AGCTGCCGCT GCCGCCGTCA CCTTCACCGG CCTCAACGAT GTCGTTTCCT CTGGGTTCCA ATTGGGACGA CGGGACCTCG CTCCCAATCA GCCTGGCAAT
GAACCGACTA CTTTGCCGAA CGAGAACCAG TCATTGGACG CCATTTTGAC ATTGTTTGCT ACCTTCGGCT TAACCGCCAA GGAGAGCACC GTGTGGGCCA TAGGAGGCCA CAGTATCGGG
GTTGCCGATT GCGCCCATTT CAGCTCGCGA TTGAGCAATG TGAGCACTTT TCCCGGCTGC TTGCGGCCGG CGGATCCCAC CCTCGATCCC AGTCTGGCTT GCAGATTGGC TCGACAGTGC
AGCATCCAAG ATATCCGCTT GCCCTTCGAC TTTGTGACTC CTTTCTCCCT GGATACCAGC TACTTCCAGC TGCTGCTGAA GAAACAAGGG CTTCTGAAAT CAGATCAAGC ATTCTCTGCC
CATCCCCGAA CGTCAGCTTT CATACGTCAG TACGCCACTT TCCCTGGACT ATTCAGCGGA GACTTCCTCA AGGCGTTCGT AAAGGTATCG CTCTTTAATG TCAACAGCCC CCAGACTGCG
CCGCCGACCC AGTATTATTA CCCTTAG
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Retrieve as FASTA
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