Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
378 (330) |
| PWM (Da): |
39902.16 (35503.2) |
|
| PI (pH):
| 8.12 (8.01) |
Peptide Signal:
| cut: 49 range:49-378 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDRLSSAAFR CSGRGGGGGG GGGGGGGSCL YALCLLFCLC FSAAGVAAQT ASVVIVHPRP DNRPPPPVYS SNPTKGVLDS SLYYPGDAQC LMAAIKKFAT AVVVRDRTKA ATLLRLVFHD
CMTTGGGCEA SILTDREINN AVNADLKRVV PDIHSIRDKA GRACGVLPTL ADTIARAAAA AVTFTGLNDV VSVGFDLGRR DLAPNEPGNE PTTLPNENQS LDAILSLFAT FGLTDKESTV
WSIGGHSIGV ADCIHFSSRL SNESTRPGCL QPADPTLDPG LACKLARHCS INKDIRLPFD FRTPFSLDTS YFQLLLKHQG LLRTDQAFAV HPRTSAFITQ YATSPGLFSG DFLKAFVKVS
LFNVNSAQTA PPTKYYYP
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq.and genomic (scaffold_670, no intron). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCGTC TGTCGAGTGC TGCGTTTCGG TGTTCGGGAA GAGGAGGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG TAGTTGCCTG TACGCCCTCT GCCTGCTTTT TTGCTTGTGT
TTCTCTGCGG CGGGGGTCGC TGCCCAGACT GCCAGCGTTG TGATTGTTCA TCCTCGTCCT GATAATCGCC CTCCTCCTCC GGTATACTCT TCTAACCCCA CCAAAGGTGT TCTCGATTCT
TCTCTTTACT ATCCTGGAGA TGCCCAGTGT CTTATGGCAG CTATCAAGAA GTTTGCTACC GCCGTAGTCG TGCGCGATCG GACGAAGGCT GCGACGCTGT TGCGACTCGT TTTCCACGAC
TGCATGACGA CGGGCGGCGG CTGCGAGGCG TCTATTCTGA CCGATCGCGA GATCAACAAT GCCGTCAACG CCGACTTGAA GCGGGTGGTC CCCGACATCC ACAGCATTCG AGACAAGGCG
GGAAGAGCAT GCGGCGTGCT TCCGACCTTG GCCGACACCA TAGCCAGAGC TGCCGCTGCG GCCGTCACCT TCACCGGCCT CAACGATGTC GTTTCGGTTG GGTTCGACTT GGGACGACGG
GACCTCGCTC CCAATGAGCC TGGCAATGAA CCGACTACTT TGCCGAACGA GAACCAGTCA TTGGACGCCA TTTTGTCATT GTTTGCTACC TTCGGCTTAA CCGACAAGGA GAGCACCGTG
TGGTCCATAG GCGGCCACAG TATCGGGGTT GCCGATTGCA TCCATTTCAG CTCGAGATTG AGCAATGAGA GCACTCGTCC GGGCTGCTTG CAGCCGGCGG ATCCGACGCT CGATCCGGGT
CTGGCTTGCA AATTGGCGCG ACACTGCAGC ATCAACAAGG ACATCCGCTT GCCCTTCGAC TTTCGGACTC CTTTCTCTCT GGACACCAGC TACTTCCAGC TGCTGCTnAA GCACCAAGGG
CTTCTGAGAA CAGATCAAGC ATTCGCTGTC CATCCCCGAA CGTCAGCTTT CATAACTCAG TACGCCACTT CGCCTGGACT ATTCAGCGGA GACTTCCTCA AGGCGTTCGT CAAGGTATCG
CTCTTTAATG TCAACAGCGC CCAGACTGCG CCGCCGACCA AGTATTATTA CCCTTAA
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Retrieve as FASTA
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|
CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCGTC TGTCGAGTGC TGCGTTTCGG TGTTCGGGAA GAGGAGGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG TAGTTGCCTG TACGCCCTCT GCCTGCTTTT TTGCTTGTGT
TTCTCTGCGG CGGGGGTCGC TGCCCAGACT GCCAGCGTTG TGATTGTTCA TCCTCGTCCT GATAATCGCC CTCCTCCTCC GGTATACTCT TCTAACCCCA CCAAAGGTGT TCTCGATTCT
TCTCTTTACT ATCCTGGAGA TGCCCAGTGT CTTATGGCAG CTATCAAGAA GTTTGCTACC GCCGTAGTCG TGCGCGATCG GACGAAGGCT GCGACGCTGT TGCGACTCGT TTTCCACGAC
TGCATGACGA CGGGCGGCGG CTGCGAGGCG TCTATTCTGA CCGATCGCGA GATCAACAAT GCCGTCAACG CCGACTTGAA GCGGGTGGTC CCCGACATCC ACAGCATTCG AGACAAGGCG
GGAAGAGCAT GCGGCGTGCT TCCGACCTTG GCCGACACCA TAGCCAGAGC TGCCGCTGCG GCCGTCACCT TCACCGGCCT CAACGATGTC GTTTCGGTTG GGTTCGACTT GGGACGACGG
GACCTCGCTC CCAATGAGCC TGGCAATGAA CCGACTACTT TGCCGAACGA GAACCAGTCA TTGGACGCCA TTTTGTCATT GTTTGCTACC TTCGGCTTAA CCGACAAGGA GAGCACCGTG
TGGTCCATAG GCGGCCACAG TATCGGGGTT GCCGATTGCA TCCATTTCAG CTCGAGATTG AGCAATGAGA GCACTCGTCC GGGCTGCTTG CAGCCGGCGG ATCCGACGCT CGATCCGGGT
CTGGCTTGCA AATTGGCGCG ACACTGCAGC ATCAACAAGG ACATCCGCTT GCCCTTCGAC TTTCGGACTC CTTTCTCTCT GGACACCAGC TACTTCCAGC TGCTGCTnAA GCACCAAGGG
CTTCTGAGAA CAGATCAAGC ATTCGCTGTC CATCCCCGAA CGTCAGCTTT CATAACTCAG TACGCCACTT CGCCTGGACT ATTCAGCGGA GACTTCCTCA AGGCGTTCGT CAAGGTATCG
CTCTTTAATG TCAACAGCGC CCAGACTGCG CCGCCGACCA AGTATTATTA CCCTTAA
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Retrieve as FASTA
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