Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
246 (294) |
PWM (Da): |
27090.54 (30966.0) |
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PI (pH):
| 5.61 (6.65) |
Peptide Signal:
| cut: 26 range:26-319 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGPPTVDQAY SDAVEAARAD LGAFIKEKNC APIMVRLGWH DAGTYCAKSK TGGANGSIRH TEENSHGANM GLTIALKWIE EFKAKYPILS YADLIQLGGY AALDVTGGPK IEFTPGRQDC
DKCTEDGRLP DATKGPDHLR DVFHRMGITD QEIVLLSGAH TLGRCHKERS GFEGPWTTKP LVFDNSYFTE LLTGEKEGLL QLPTDKALIE DPVFKPWVEL YAKDQDKFFE DYARAHKKLS
ELGFVY
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Retrieve as FASTA
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Remarks |
Complete sequence from RNA seq and genomic (scaffold_179, no intron). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGACCAC CTACAGTCGA CCAGGCTTAC TCCGACGCCG TGGAGGCTGC CAGGGCGGAC TTGGGCGCCT TCATCAAGGA GAAGAACTGC GCGCCAATTA TGGTCCGCCT GGGCTGGCAC
GACGCCGGGA CCTACTGTGC GAAGTCGAAG ACCGGTGGTG CTAATGGCTC CATCCGCCAT ACCGAAGAGA ATTCCCATGG GGCCAACATG GGTCTGACCA TTGCCTTGAA GTGGATAGAG
GAGTTTAAGG CCAAGTACCC AATTTTGTCG TATGCGGATC TCATTCAGCT GGGCGGCTAT GCAGCGCTGG ACGTGACAGG CGGCCCGAAG ATCGAGTTCA CCCCGGGTCG CCAGGATTGC
GACAAGTGCA CTGAAGATGG CCGGCTGCCC GATGCCACGA AGGGTCCCGA CCATCTGCGC GATGTCTTCC ATCGCATGGG CATCACCGAT CAGGAGATTG TCCTCCTCTC CGGTGCGCAT
ACGTTGGGCA GGTGTCACAA GGAGCGGTCG GGATTCGAGG GGCCTTGGAC CACTAAACCC CTGGTTTTCG ATAACAGCTA CTTCACTGAG CTCCTGACTG GCGAGAAGGA GGGGCTTCTT
CAGCTACCAA CTGATAAGGC TTTGATTGAA GACCCCGTCT TCAAACCCTG GGTGGAGTTG TACGCCAAGG ATCAGGACAA ATTCTTTGAA GATTACGCGC GTGCGCACAA GAAGCTGTCG
GAGCTCGGGT TCGTGTACTG A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGACCAC CTACAGTCGA CCAGGCTTAC TCCGACGCCG TGGAGGCTGC CAGGGCGGAC TTGGGCGCCT TCATCAAGGA GAAGAACTGC GCGCCAATTA TGGTCCGCCT GGGCTGGCAC
GACGCCGGGA CCTACTGTGC GAAGTCGAAG ACCGGTGGTG CTAATGGCTC CATCCGCCAT ACCGAAGAGA ATTCCCATGG GGCCAACATG GGTCTGACCA TTGCCTTGAA GTGGATAGAG
GAGTTTAAGG CCAAGTACCC AATTTTGTCG TATGCGGATC TCATTCAGCT GGGCGGCTAT GCAGCGCTGG ACGTGACAGG CGGCCCGAAG ATCGAGTTCA CCCCGGGTCG CCAGGATTGC
GACAAGTGCA CTGAAGATGG CCGGCTGCCC GATGCCACGA AGGGTCCCGA CCATCTGCGC GATGTCTTCC ATCGCATGGG CATCACCGAT CAGGAGATTG TCCTCCTCTC CGGTGCGCAT
ACGTTGGGCA GGTGTCACAA GGAGCGGTCG GGATTCGAGG GGCCTTGGAC CACTAAACCC CTGGTTTTCG ATAACAGCTA CTTCACTGAG CTCCTGACTG GCGAGAAGGA GGGGCTTCTT
CAGCTACCAA CTGATAAGGC TTTGATTGAA GACCCCGTCT TCAAACCCTG GGTGGAGTTG TACGCCAAGG ATCAGGACAA ATTCTTTGAA GATTACGCGC GTGCGCACAA GAAGCTGTCG
GAGCTCGGGT TCGTGTACTG A
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Retrieve as FASTA
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