Entry information : CbraPrx09 (g24240.t1)
Entry ID 12957
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2014-09-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-09-10 (Christophe Dunand)
Peroxidase information: CbraPrx09 (g24240.t1)
Name (synonym) CbraPrx09 (g24240.t1)
Class Class III peroxidase    [Orthogroup: Prx061]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraPrx09
start..stop
S start..stop
CvuPrx01 404 8e-142 124..364 1..244
NhyPrx03 238 9e-76 91..393 3..303
CbraPrx04 233 2e-73 90..393 60..364
CbraPrx06 225 3e-70 90..393 61..365
Literature and cross-references CbraPrx09 (g24240.t1)
Protein sequence: CbraPrx09 (g24240.t1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   435 (401)
PWM (Da):   %s   46105.54 (42475.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.92 (4.88) Peptide Signal:   %s   cut: 35 range:35-435
Sequence
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Send to Peroxiscan
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MESLRLRLHP LPLPLLILLL AILLGMGSIG EGEARSVMTG GVEELVERDP RGMPLRLAGR GQAVEEEEEE AAAGLSQTAC PTKRLPYDPN PVRGQLDPTL YNPEDAMCLL RSLFIVSLDE  LRADPSFPPG FLRLAFHDCM TAGGGCDGSV LKPAELNSPA NARLRRLSNI TLRIQSRAAA MCLNVRPTLA DTIAVAGDVA NVLSGSPSGI SMGLRLGRRD ADPNLPGDNA TTLPSPFDPF  PVALEKMIRL GLTVEEATLF TVGGHSIGTS GCGAFRRRLS ANISTCSSPP DRDLQPAYAC QLSTICAQPA ARADFDPATP LLLDTAIFRL LLEGKGLLTT DQDFFTNFTT RPFVLKYASL 
EGSLSFPTDF VAVYVKHLRI GINGPTSRPP ASYCLTTAEQ ASSSSESSSS SFSSSSSDAA SQIESLLLST LQAVF 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (scaffold_2, no intron).
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGTCCC TTCGCCTTCG TCTTCATCCT CTTCCACTTC CTCTTCTAAT TCTTCTACTT GCTATTCTGC TGGGGATGGG TAGTATTGGA GAAGGAGAGG CGAGGAGCGT AATGACCGGC  GGCGTGGAGG AGCTTGTCGA GAGGGATCCG AGGGGAATGC CGTTGCGATT GGCCGGTCGG GGACAAGCAG TCGAGGAGGA AGAAGAAGAA GCTGCCGCGG GGTTGTCCCA AACCGCGTGC  CCAACGAAGA GACTTCCGTA CGATCCCAAT CCCGTCCGAG GCCAGCTGGA TCCCACCCTT TACAACCCCG AAGATGCCAT GTGTCTCCTC CGCTCTCTCT TCATCGTCTC TCTGGATGAG  CTGCGGGCCG ACCCGTCGTT CCCTCCGGGC TTCCTCCGTC TCGCATTCCA CGACTGCATG ACAGCCGGCG GCGGCTGCGA TGGGTCCGTC CTCAAGCCGG CGGAGCTGAA TTCTCCGGCC  AATGCCCGCC TAAGGAGGCT GAGCAACATC ACTCTGCGCA TTCAATCTCG GGCAGCGGCG ATGTGTCTGA ACGTGAGGCC CACGCTCGCC GACACCATAG CCGTGGCCGG TGACGTGGCC  AACGTCTTGT CCGGATCCCC GAGCGGGATA AGCATGGGGT TGAGGTTGGG ACGTCGCGAT GCCGACCCCA ACCTTCCGGG GGACAACGCC ACGACCCTCC CCAGTCCGTT TGACCCCTTC  CCCGTGGCCC TCGAGAAAAT GATAAGGCTG GGACTGACCG TGGAGGAGGC CACGCTGTTC ACCGTGGGGG GCCATAGCAT CGGGACGTCG GGCTGCGGAG CCTTTCGTCG CCGGCTGAGT  GCCAACATCA GCACGTGCTC GTCTCCGCCG GATCGGGATC TGCAGCCGGC GTACGCTTGC CAGCTCAGCA CGATCTGCGC TCAGCCCGCC GCCCGGGCGG ACTTCGACCC CGCGACCCCC  CTCTTGCTCG ACACCGCCAT CTTCAGACTC TTGCTGGAGG GAAAAGGCCT GCTGACGACA GATCAGGACT TCTTCACCAA CTTCACGACG AGACCTTTCG TGCTCAAGTA CGCATCGTTG  GAGGGGTCGT TGAGCTTTCC CACAGACTTC GTGGCTGTCT ACGTGAAGCA TCTTCGCATT GGAATCAACG GACCAACGAG CAGACCTCCA GCCAGCTACT GCCTCACGAC GGCCGAGCAA 
GCGTCTTCCT CTTCGGAATC CTCTTCCTCT TCCTTCTCTT CGTCTTCCTC CGACGCTGCT TCCCAAATTG AATCTCTTTT GCTTAGTACC CTTCAGGCCG TGTTTTAA 

Retrieve as FASTA