Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
269 |
PWM (Da): |
27486.9 |
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PI (pH):
| 8.28 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAAATGSASL SLVGSSTAAR RVGTATPKVR AMAMPTSAHL CGLINRQSSC VGGSQIVRGS PCAPRRLVAI PSLFPSTSSS SVSSVSDASL SSGIRCQSSS SAPSATKAKT IAVGDSIPNV
GLQYFDEEGV MQTVMTGDLA KGKKIVLFAV PGAFTPTCSQ KHLPAFVEKA DELNAKGVSV IACVSVNDPF VMQAWGKNVG VSDKVMLLAD GSGQFTQAMG VELDLIDRGL GVRSRRYAML
VDDGVVKICN LEEGGAFTNS GPESILEAL
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Retrieve as FASTA
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Remarks |
Complete sequence from RNA seq and genomic (scaffold_288, no intron). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGGCGG CGACGGGATC CGCCTCACTT AGTCTTGTGG GCTCGTCTAC TGCTGCGCGT CGAGTCGGTA CGGCAACGCC TAAGGTCCGG GCGATGGCAA TGCCCACGTC CGCTCATCTG
TGCGGATTGA TCAATCGGCA GTCGTCGTGC GTGGGGGGTT CGCAGATCGT GAGGGGAAGC CCTTGCGCGC CGCGACGACT GGTCGCGATC CCGTCCCTCT TCCCCTCAAC TTCCTCCTCC
TCTGTCTCCT CTGTCTCTGA CGCCTCTCTT TCGTCAGGCA TCCGCTGCCA GTCGTCCTCC TCCGCGCCGA GCGCCACCAA GGCGAAGACC ATCGCTGTGG GCGATTCCAT CCCCAATGTC
GGCCTTCAGT ACTTCGACGA GGAGGGCGTT ATGCAGACGG TAATGACGGG AGATCTGGCC AAGGGCAAGA AGATAGTCTT ATTCGCCGTG CCGGGGGCGT TCACACCTAC GTGTTCTCAG
AAACATCTTC CTGCTTTTGT CGAGAAGGCG GATGAGCTTA ATGCCAAGGG CGTGAGCGTC ATCGCTTGCG TGTCAGTGAA CGATCCTTTC GTGATGCAGG CTTGGGGAAA AAACGTTGGG
GTGTCCGACA AGGTGATGCT GCTAGCTGAC GGGAGTGGCC AGTTCACCCA GGCCATGGGA GTGGAGCTGG ATCTAATCGA TCGAGGTCTC GGTGTCAGGT CGCGACGCTA CGCCATGCTT
GTAGACGACG GGGTTGTCAA GATTTGCAAT CTGGAGGAAG GAGGCGCTTT CACCAATAGC GGCCCAGAGA GCATTCTCGA AGCCCTCTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGGCGG CGACGGGATC CGCCTCACTT AGTCTTGTGG GCTCGTCTAC TGCTGCGCGT CGAGTCGGTA CGGCAACGCC TAAGGTCCGG GCGATGGCAA TGCCCACGTC CGCTCATCTG
TGCGGATTGA TCAATCGGCA GTCGTCGTGC GTGGGGGGTT CGCAGATCGT GAGGGGAAGC CCTTGCGCGC CGCGACGACT GGTCGCGATC CCGTCCCTCT TCCCCTCAAC TTCCTCCTCC
TCTGTCTCCT CTGTCTCTGA CGCCTCTCTT TCGTCAGGCA TCCGCTGCCA GTCGTCCTCC TCCGCGCCGA GCGCCACCAA GGCGAAGACC ATCGCTGTGG GCGATTCCAT CCCCAATGTC
GGCCTTCAGT ACTTCGACGA GGAGGGCGTT ATGCAGACGG TAATGACGGG AGATCTGGCC AAGGGCAAGA AGATAGTCTT ATTCGCCGTG CCGGGGGCGT TCACACCTAC GTGTTCTCAG
AAACATCTTC CTGCTTTTGT CGAGAAGGCG GATGAGCTTA ATGCCAAGGG CGTGAGCGTC ATCGCTTGCG TGTCAGTGAA CGATCCTTTC GTGATGCAGG CTTGGGGAAA AAACGTTGGG
GTGTCCGACA AGGTGATGCT GCTAGCTGAC GGGAGTGGCC AGTTCACCCA GGCCATGGGA GTGGAGCTGG ATCTAATCGA TCGAGGTCTC GGTGTCAGGT CGCGACGCTA CGCCATGCTT
GTAGACGACG GGGTTGTCAA GATTTGCAAT CTGGAGGAAG GAGGCGCTTT CACCAATAGC GGCCCAGAGA GCATTCTCGA AGCCCTCTAG
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Retrieve as FASTA
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