Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
376 |
| PWM (Da): |
41558.39 |
Transmb domain: |
o344-366i |
| PI (pH):
| 9 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSLQPESRTA KVGDGGGKRS IWVRSPLGRH KWHPQAVLEQ LRCAREDLKV LIKEKNCNPI LVRLAWHDAG TYNQNISGWP FAGGAIGTIR YHPQLSHESN AGLVNAIKLL DPIREKYPAV
SNADLLQLAG ATAIEMAGGP TLPMKYGRID APSEEFCAPD NVLPMANPPD PAAHLRGVFY RMGFTDNDIV ALSGAHTLGR ARPERSGFGK IHTPYTKDGP GAPGGQSWTK EWLKFDNGYY
KEVRDKTDEH LLVLPTDAVL FQDEGFKVYA EKYAEDQDAF FRDYAEAHVK LSNLGCKFDP SQGIRLGDHP SQLSYRRTVK ALTASLNRFA AVAARLPQHG QQYTSTFLWV FALIAMLAVV
VKLLTWDELP LAKRVG
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq and genomic (scaffold_352, no intron). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGCTTGC AACCAGAGTC GCGGACCGCC AAGGTAGGAG ATGGGGGCGG GAAGCGGAGC ATATGGGTAC GGAGCCCTTT GGGGCGCCAC AAGTGGCATC CCCAAGCGGT GCTCGAGCAA
CTGAGGTGTG CCCGGGAAGA TTTAAAGGTC CTGATAAAGG AGAAGAATTG CAATCCTATT CTTGTTCGAC TGGCATGGCA TGATGCAGGG ACTTACAACC AGAACATTTC AGGGTGGCCT
TTTGCAGGGG GGGCCATCGG TACCATTCGA TACCACCCCC AGCTGAGTCA TGAGTCCAAC GCAGGCTTGG TGAATGCCAT CAAGCTGCTT GATCCCATCA GAGAGAAGTA CCCTGCAGTT
AGTAATGCCG ATCTTCTCCA GCTCGCAGGC GCTACTGCAA TCGAGATGGC AGGAGGGCCG ACGCTCCCCA TGAAGTATGG TCGTATTGAC GCTCCATCCG AGGAGTTCTG CGCTCCCGAC
AACGTCTTAC CCATGGCTAA TCCTCCTGAC CCGGCTGCGC ATCTCCGAGG TGTGTTCTAC AGAATGGGTT TTACCGACAA TGACATCGTG GCGCTCTCCG GAGCGCACAC GCTAGGCCGA
GCTAGACCGG AACGCAGTGG GTTTGGCAAG ATCCATACAC CCTACACCAA GGATGGACCA GGCGCACCAG GCGGTCAATC CTGGACCAAA GAATGGCTCA AATTTGACAA CGGCTACTAC
AAGGAAGTAA GGGACAAAAC CGACGAGCAT CTGCTGGTCT TGCCCACCGA CGCTGTGCTG TTTCAAGATG AAGGGTTCAA GGTTTATGCA GAGAAGTATG CAGAGGATCA GGATGCGTTT
TTCCGGGACT ACGCGGAGGC GCATGTGAAG CTGAGCAACT TAGGGTGCAA GTTCGATCCC TCTCAAGGTA TCCGGCTTGG GGACCATCCT TCTCAATTGT CATACAGACG GACAGTCAAG
GCTTTGACAG CTAGTCTGAA CAGATTTGCT GCTGTAGCTG CCAGATTGCC TCAACACGGT CAACAGTATA CCAGCACATT CCTATGGGTC TTTGCGTTAA TCGCAATGCT AGCTGTAGTT
GTAAAGCTTC TCACCTGGGA TGAGCTCCCA CTAGCAAAGA GGGTTGGATA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGCTTGC AACCAGAGTC GCGGACCGCC AAGGTAGGAG ATGGGGGCGG GAAGCGGAGC ATATGGGTAC GGAGCCCTTT GGGGCGCCAC AAGTGGCATC CCCAAGCGGT GCTCGAGCAA
CTGAGGTGTG CCCGGGAAGA TTTAAAGGTC CTGATAAAGG AGAAGAATTG CAATCCTATT CTTGTTCGAC TGGCATGGCA TGATGCAGGG ACTTACAACC AGAACATTTC AGGGTGGCCT
TTTGCAGGGG GGGCCATCGG TACCATTCGA TACCACCCCC AGCTGAGTCA TGAGTCCAAC GCAGGCTTGG TGAATGCCAT CAAGCTGCTT GATCCCATCA GAGAGAAGTA CCCTGCAGTT
AGTAATGCCG ATCTTCTCCA GCTCGCAGGC GCTACTGCAA TCGAGATGGC AGGAGGGCCG ACGCTCCCCA TGAAGTATGG TCGTATTGAC GCTCCATCCG AGGAGTTCTG CGCTCCCGAC
AACGTCTTAC CCATGGCTAA TCCTCCTGAC CCGGCTGCGC ATCTCCGAGG TGTGTTCTAC AGAATGGGTT TTACCGACAA TGACATCGTG GCGCTCTCCG GAGCGCACAC GCTAGGCCGA
GCTAGACCGG AACGCAGTGG GTTTGGCAAG ATCCATACAC CCTACACCAA GGATGGACCA GGCGCACCAG GCGGTCAATC CTGGACCAAA GAATGGCTCA AATTTGACAA CGGCTACTAC
AAGGAAGTAA GGGACAAAAC CGACGAGCAT CTGCTGGTCT TGCCCACCGA CGCTGTGCTG TTTCAAGATG AAGGGTTCAA GGTTTATGCA GAGAAGTATG CAGAGGATCA GGATGCGTTT
TTCCGGGACT ACGCGGAGGC GCATGTGAAG CTGAGCAACT TAGGGTGCAA GTTCGATCCC TCTCAAGGTA TCCGGCTTGG GGACCATCCT TCTCAATTGT CATACAGACG GACAGTCAAG
GCTTTGACAG CTAGTCTGAA CAGATTTGCT GCTGTAGCTG CCAGATTGCC TCAACACGGT CAACAGTATA CCAGCACATT CCTATGGGTC TTTGCGTTAA TCGCAATGCT AGCTGTAGTT
GTAAAGCTTC TCACCTGGGA TGAGCTCCCA CTAGCAAAGA GGGTTGGATA A
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Retrieve as FASTA
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