Entry information : Cbra2CysPrx01 ( g34275.t1 / CHBRA41g00500)
Entry ID 12964
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2016-02-16 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: Cbra2CysPrx01 ( g34275.t1 / CHBRA41g00500)
Name (synonym) Cbra2CysPrx01 ( g34275.t1 / CHBRA41g00500)
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Cbra2CysPrx01
start..stop
S start..stop
Kfl2CysPrx01 371 9.96e-131 6..284 1..285
Nt2CysPrx02-1A 369 2.84e-130 42..285 34..268
LePrxII03 366 4.42e-129 57..285 39..268
Cpsl2CysPrx01 366 4.71e-129 78..284 63..267
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12964' 'join(2536850..2537107,2538614..2538688,2540635..2540799,2545406..2545531,2545974..2546087,2546809..2546925)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2536850..2537107 256 N° 2 2538614..2538688 73 N° 3 2540635..2540799 163 N° 4 2545406..2545531 124
N° 5 2545974..2546087 112 N° 6 2546809..2546925 115  
join(2536850..2537107,2538614..2538688,2540635..2540799,2545406..2545531,2545974 ..2546087,2546809..2546925)


exon

Literature and cross-references Cbra2CysPrx01 ( g34275.t1 / CHBRA41g00500)
Protein sequence: Cbra2CysPrx01 ( g34275.t1 / CHBRA41g00500)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   284 (319)
PWM (Da):   %s   30763.72 (32998.8)  
PI (pH):   %s   5.69 (7.68) Peptide Signal:   %s   cut: 51 range:51-369
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAATTLHASLSTAAVGLSHNGGIGTQCQRRSATSALPAVKLTTYEGLGKASRLTADVVPRVSTRKNLKCGAVSSPDSSSKTLDIRAHCQPLVGNKAPDFEAKAVFDQEFIEVKLSDYQAQ
GKYVVLFFYPLDFTFVCPTEITAFSDRYAEFAALNTEVLGVSVDSVFSHLAWIQTERKSGGLGDLSYPLVSDITKDIARQYNVLIEEEGVALRGLFIIDTEGVIQHATINNLAIGRSVDE
TLRTLQAVQYVQENPDEVCPAGWKPGEKSMKPDPKGSKEYFAAI*

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (scaffold_41, 5 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGACTACCCTTCACGCATCTCTTTCTACTGCCGCAGTAGGGTTGTCCCACAATGGCGGGATCGGGACGCAATGCCAGCGGCGATCTGCTACGAGCGCGTTGCCAGCTGTCAAG
TTGACGACCTATGAGGGACTCGGAAAGGCGTCCCGCCTGACGGCGGACGTTGTGCCACGTGTCAGCACAAGGAAGAACCTCAAGTGCGGTGCCGTTTCTTCACCGGACTCGTCATCGAAG
ACGCTTGACATCCGAGCG
CGGTAAGTTAGGTTCTCTTTTGCTCATTCCAGCTGTCACTCTTTCCCGCCACATTTGCCGTCAAGGCGGTCACGTCCCCGACCACCTGACGCTCGGGCTTCC
TTGGACGTATCTGACCGCAGTTACGCCGTGTTGTCTGTTTTCTACTTTTACTTGTCGCTTGACCAAATACTCCTTCCGGCAGTTCATAGTCTCTCTCTCTCTCTCTCTCTCCCTCGTTTT
TCACCGCCAAGAGCAGGATAGTCATGATCGACATCAAGAATCAGCCAGTAAGAAGAGCAGCTGAAAGCTGACGTTACTTTCGATCAGCATGCTGGTCCAGATCAACAGTAACCGCAAACT
GTGGGCCAGCGATTTTGCTCCGCTTTTGCTCCGCCGTTTTCTAGTGGTCAGATCACGATTTTATATCGCCCTTTGAAATCGTCATGCATGTGATCCTCACTTGTTCTCTCGCTCTCTCTG
TTGACACGCACAGGCCCGCACTCAAGGCCCCGCCCCTGCGAGTGTCAGCAGAGTAGGATTGGGACGAGCAACATCCTACATCAGCATGAGCAGCACAAGTATCATCATAATCAACACACG
ATCATCAGCATGAAAATGCAAGGGTCATCTCTCTTTCTCTGTGACTGTGCATGCATTCATCAATGTTCTCATCGTGATCGTAGTCTTTGTTTAATCACCAAAATTGCGATCAGCATGCGC
GGTGAAAGAAAAGCAAACCGTACAAGTTCAACCCCAAAAAAAGAATTTCAAAACCAAACGAATGATTTTTTAAATGATGTACACGTCACACAGCTTACCTTCAGCCGAAGCACCCTCCAT
CGATTGTCGGGCAGTGCTTGCCTCCGGCACATTATGAGGACTTCTCCACGCGACCGAGCAGCCGACTTGTCCACCTTCTCCTCTCCTCTCTCCTCCACTCCTGTCCTCTCTCCTCTTCTC
CTCTCCCGTTCTCTTCTCCTTCTCATCTCTACTCTTCTCCTCTCATGATGCAGACCGATTAGACGCGCGTCAAGCCTTCTTCAATTGCACAACCGTCCCTCGACCTCCTCCTCTCTTCTC
CTATCATGTATGTCTATCTCTCCATCTCAAAGCAGCTGCCGCCGAGTATAATCGACAGTCAAAGAGAAGAAGACAAAGGACCAAATCTGTCAGTCTCTCTTCTCTTTTATCCTATCATGT
AATGTCTACCTTTTCACTAGCGCACGAACCAACGCCATGTGGTGAATGCGTCTGACCCTTTTTTGCTAGCGCACGAACCAACGCCATGGCGAATGTATCTGACCCCTCTTCGCCAGCGCA
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGCGTGGGAAGTGGCTTTGGTTGCCGGAGGTGTGGCTTTGGTTGCCGGAGGTTTGCAGGTTGC
GTGAAGGAGGGGCCTTTGAGGCTAACGATTGTGTTTTTTGGGCGAACGGTGTTCTGTGTTTCTGCGAATTGTGTCTTGTGGCACAGCATTGCCAGCCTTTGGTGGGAAACAAGGCTCCTG
ATTTTGAAGCCAAAGCCGTCTTTGACCAAGAATTTATCGAG
AGGTACGTGGATTGAGTGCTGCATGTTTCAGCTAGCGGTCGTCCGTCATGTTTCATTTCCGTAAGCGGTCGTCCGTCGT
GTTTCCGCTAGCGGTCGTCTGTCATCTGTTCGTCGGCGGTCGTTCTTTGTATTTCCGCCAGCGTTCCTGTCAGATGTTCGTGTATAGTGTCTGGTTATGTTGTTCTCTGAGCGAAGGTAT
TGAGGAGGAGAATGAAGAGGCGAAGGAAAAAAAAAAAAAAAAAGAGAGAAGAGGCAGTTCTCCATCGTAATTTGGAAAGGAGCCGACTAGAGAGAACGTGTGTGAAGTGGTATTTGCGTG
TGGGGATGCACCCAAGCGTCCTAAGTAGTACAATTACGAGAAATTAAAAACCGCGGTTATGGCTGCTCCCTCCGCGGCACCCGGGTTCGTCTGATAAGTTAACTGTCTTCTTCCGTATAG
AACGCCGGGTCATTCATTGTAGCTGTATTTGGGTCAGCTGTCTGTCTACATGCAACGATAATGACCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTATTCGGGTGAAGACTGGGTCATTGTA
GCTGTATTTGGGTCAGCTGTCTGTCTATATGCAACGATAATGACCGGACGTTCTATTCGGGTGAAGACTTTGTAGTTCTTAACAGGGATTTGTCTAGTCCAGACGGTAGAATGAATTTAC
TGAAGAGCTGCCAACGGATGACAGTATGTGAAATGTACTGAAGAGCTGCCAACGGATGACAATGTGTGAAATTTACTGCAGAGCTCCCGACGATTTTGTTAGGTGTAGCTGAATACATCG
CACATTTCTCTTCATTCAATTTTCATATAGCATGCGTCAGTGTACTGATAGCATCACGCGTCAGTATAGAGAAACTACCAGCACGCATCAGGTGCTGGTCGGACATTGTCACACAAACAG
AAGCAGGAATAATATCCTGGTGAACGCACGGGCGCACAGTCTTACTGTAGTAGATGAGGCAGAGGGGTCGCGACGTACACTGTGCAAGGCCTTCGCTCTGGTGTTTTGATTGACTGGCTT
TGCGGTTTTTGCCAATCCGTTTTTTGTTTTCTGCTATGAGCAGTTGTGCTTTCTGCACCAAGAAACTGTGAACTGTGCGGTGCCGGGGTGTGTGTAATAGGACGGTCGTGATGTTTCCAA
TCCCGTTTACTTCTGTCAGTCTGAATAAATCAAAGATTGTTGATTACCATGAAGGCCGATTCAACCGAAGGTAGAGGAATGGTGAATAGTGAAAACAGGGGCCAGCTGCCTTCCGCACAC
GCGTCTCAAGTTCTCCATTACATAGCCGCACGTAGTCTCAGCTTACGCACAGATTCCCCGACGCGCGTTTCGATCGGCTGCGCGCCGATCATCCTCGGGGGGCTTCCCGCACAACCATGC
CTTGCGGTCCACCGACTGCCCTCCCGCCTACCGAGTATGGGGAGGGCCGATACGGCCTTTTGCCCTCCTCATATATACTGTAACCCAAGCTGTGGATGTGTTCTGAGAGTTCGCGTTTTT
TTTTTCGTGGTTGACTGATCAGTGCTTGTGCATGTATTCTGGTCGGCCTGTTTTCGCTGATTGATCGATTAGTGCGTGTGCTGGTTTACTGAGCGACATGGTATGTCTTGAAAGCCACGT
TCTTCAGCTTTGAGAGGTTGTTCTGCCGTTGCTGCATACTGGTCGTGGAATGATGTCTTGGAGAAAAGACGAGCGTCCTTTTTTATTAATTAATTCGTATATTGTCTGGTTTAAAATTTA
CACGTGTGGTGTGGTATTGAATTATCTGACAGTGGAAGCGTCATAACCATGTGGGGATTGAAAACGCAGGTTAAGCTGTCAGATTACCAGGCGCAGGGCAAGTACGTAGTGCTGTTCTTC
TACCCTCTGGACTTCACGTTTGTGTGCCCGACGGAGATCACGGCCTTCAGTGATCGGTATGCGGAGTTTGCAGCACTCAATACCGAAGTGCTGGGCGTTAGTGTGGACAGTGTG
TGGTAA
GTTCTCTACCTATATATCTAGTAATAGGCTTTGTAAGGATGTAGTTAGTAGTTAGCGGCGGCAATTTCCTGACGCTCCTGGTCCCTTCCATCCTTCGCTTGCCCTTTGTTCTCTTATCTT
TATGCGCCTCTTGTGTGCTGGTTCCTCCTGTTTTTCCCTTTCTCTTTTAAATGAAGCCAGCTCCATTGTTGGCTGGAAACCGGGTCTATTGTGCATTGCTAGAGTACCCGTACCCGCTCG
ACGTTTCCTCCCGCTATGGCCCGAGAGAAGAAGGACCCTGAGACACCGGCATTATTATTATTCTTATTTTCGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTGGTAGACCTTCTTTGTCATGGGATATAATTTTCGTTGACATGGGATATATTGAGAATCGTAGAACGACGGTCTCCTCTTTCGCCGAGTGGCGAGGATGCGAGGTGGTGGACAGTAG
GGGAGTAAAACTGGGGGCCGTGCGTCGACATGACGTTGGGGGATCCAATCATTCATCACTCTCATCTTCTTTGAGCTTCAAGTTGACCACTGTTGACAGCCGCGTGTTAACGTGAGTCTG
TTTTTTTAATAAATGATGTGTTTGATGATATACAACACATCGTCTTGGTGTGCAAGTGTGCTGCTGCTGTCGTATTCTGCAGATTGTGATTTCCTTCTTTGTCGTTATTTTTTTATTTTT
TTTATTATTACAGAGTTTTTTTATAGTTTTTTTTTCTCATTGTTCTAAAGTTTTTTAAGAGTTTTTTTTTTTAGTTATTTTAGAGGTTTTTTTTCGTTATTTTCCAGTTTTTTTTCGTTA
TTTTTTAGCTTTATTTCGAAAAAACAAAGGTTGGGGAGGGGGACGGCAGGGCGATCGGCCCCCTGCCACATCGCAGCAGCGGTGTCACGTGGCAGGGCTACGATGGTCATGCGAGCCCCC
CCCCCCCTCTCCCTTTGTTCTTCTTTTTCTTCGTCTTCTTCTTCATTCTTGCTTTTTATAAATAAAAAAAAAATCTTTCTTTATTTCTTCCTTTATTTCTTTCTTTCATTCTTCCTTTTT
TTTTTGTTTTACAGGATTTTTTAAAGAGTTTTTTTTTTCCGTTATTTTAATGGGGTTTTTTTTTCGTTATTATAGAGTTTTTATAGAGTTTTTGTTTTATGTTATAACTTTTTTTTTTCG
TTGTTTTACAACTTTGTTTTCATTGAATAACTTTTATTTAATTATGTTTTAATTTTTTTTCTTTATTGCAGGGACATCGTCCTCACAACCTTTAAAATCGTTGTAATTTTTCGACCTCAC
AACTTTTAAATTATTTTTTTAATGCAGGGCGATCGTCGTTATTTGTCTATCTCACAACCTTTCAAATAACGCACATCAATATTTAGTGAGTGAATCAGATTGTGTGTGTGTGTGTGTGTA
TGAGAGAGAGAGAGAGAGAGGGAGAGAGAAAGCGAGAGAGAGACACACAGAGAGAGGGAGAGAGAGAGAGAGAGAAAGTGTGTGAGAGAAAGAGAGAGAGAGAGAGATTGTTTTTAGGCT
CACTACTGGGGGGCACAAAGACATCGAAGTGCAGGTTTTATCGCCCAATATGACACGCAATAGTCGACCCCATACTTTTGTTTCATTATTTTTCTTCACAAAAAGGACGAACATGTTTAT
GAGAAAAGAGTGACTCATATTGGTTGTATGAGGATGATGGGAAGGTACTGTGCACCCTATTCAGAATTTTGTGGTACTTTCGGGTCTGTGGATGTGTGTGTACACTGCTCTACCAACAAC
ATTTTGAGTACTTGTCATTGGGGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGTTCTAAAGGGCAGGCAGAGCTGCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGTTCATCCCGGTCGCAGGTAATTCAGAATGATTCTGACCGGTC
GCAGGTAATTCAGAATGATTTTATTTTGTTCATCTGACGGTGGTATCTGGATTCGAACTCGGGTCTGTATTTCAACAGTTCATGGGTGCGTACCAACTGAGCGCCACAGGCCCGTTGGTG
ACACCGGCGGCATTGACTTCTTCCTGGGGATGGAAGAATTAACCTCGGCTGCACCCATGCATGTTCTGTATACACTATTATGCTTTCTGAGCCTCCTGTCCAAGTACCCCTAGCCTGGTC
CTCTCGGTCAAATTTGACCTGACCTTCTGTAAGCTTGCTGCATCAAGAGCCATTGCCGGAGATCGACTGTCACCTCTTGCCGCATCCACTGCGTACACAGCTGGCCTTTCCCTCTCCTCG
GTGGACGCTGTACTCTGAGAAATACCTCAATTTCTGCTGAGTGTCCGTTTCGCCGCCCCTCAGCAGCACCTCTCGCTGCAATCTGTCTGTTTTGCTGTATTGGTTTCTTCTCTGTATCGT
TCTCCTCGGTGGATTACAAGTGGTGTTGGGTTCCACTGACCGGCAAGTGTAGGGCAAAGCCCAGCGAAAATGACATTGTTAAAACTCGACCCCGATGACATGTGTGAGGAAAGTTCTGCT
CAAGGCGCTGGCAAGAAGCCCACCCACCTACTAGCTTGTGTTCTATGTGATGTGAGGACTTTTGCCCCATTTCCCGACTCGTAGTAGTTCTTGAACTCTCCAGCATTGTTTAAATGAATG
CAGCCTTATTGGATGGATTTTGACAAGGCAACATCCCCACTCAAACGGACGCGCACATAGACTTCCTGGGAAGTCCTTTTCATTTTTTTGCAAATAGCCAGCCGGTGCCTACTAGGGGAG
GTGATAAGAGCAACCTCCCCTAGTAGGTCTGTGGCCGGTCGCTCCATCTATTGGAGGGGAGCTGCACCTGCTGGAAATCGGGTCCAGCGTTCCTTGAACAAGAATTGTCCGAGTACCGGA
GCCATCATTACCCGGCTTCCCGCTTCAAGACTTAGAGAAGGTCGTCAAGCTTATTGTTGCAGAAAATGCTACTAACTTGAACCGACTACCTTCTTCCCCCGAATACAACGTACGGTCATT
ATAGGTGTATTTGGGGTATGTTTCAGTCTAAATACAGATATAATGACCGTACGTTGTATTCGGGGGAAGAGGGTAGCCGGAAGCGGCATCGTTACGTTTCCTTCTTTCCTCCACCGTCCC
TCACACTCAAACCACGTGACGAACTGGCCCTGCCCCAACGCACTCTGCCGGCATTGTTTGAATGTGAACTCACTTTACTGGAGGAGTCGATGCCATGCATGGGGGAATTTTTTTCTGCTC
GACGGACTGCAAAAGAACGCTGCTCGAGGGGCAGGCAAGGAAACGGATCTTCTCTCCCGCCCCAAGGGCATGTGAATGTTTTATATGATGTGCGGACCTTAGTCCCGATTACCTCGCTTT
AGAGCTCTTGAACTTTCTGCGTGAAGGTCGCACTCTGGGTGTGTGACGTAAGAAACTGACTAAAGCACCGAAGTAACGAACCAGCAGAAACGAGTAGAGGCACCTCGCTCATCACTTACT
GATTAACCGGTGCTGAACGGGGATGGGTGAAGAGGGGTATTGCTTGGCGTGTCCTGTTTTCTGAGTAAACAGAATGTAAGAGTGGCATGTGAAGGTCCTGTTCCCCAGCTTTCTCTTTTG
CGGAATCCGAGGAAGCGTACAGAGAAAGCAGAAAAATGGATGTGGGCTGTTTTATCTTATCATGTTAATACTGTTGCTCTGACTGAAGGGAAATGGGCAATATGACCAACGCAGGGGGTT
GTATGCTCTCGCATGGATGTTGTTCTCTCTGGAAGTGGCTGCGAGTTGAGGTTCTGCTTGTCCAATTACTTTTACACATAGATTGTACTTACGAAGTTAAGAGAGGGTAGTAACTCGCAT
GAGCCATCACGGTCTTTGTTAGGAACTGCAGCTAGGAGAGAGGGAGGTTATCGAATAGAATCTGTGCCATGATGCTCAGGGTTGACATGGCACTAAGGCAACATATTCAACTAGTTCATG
ACGACCATATTTGCGAAATCAGATAGGTCGCTTTGAAGGACTGTTATAGGAAGGCATTATAGAAAAAAAAATAGGTAACATAGAAAGATGAGCAGAGCAGGGATGATCAGCATAGTTTAT
GGAAGAACAGTGTTCTTGAGTGGGTGGCTATGAAGGCAAGCACTTTACGAAATACGCCTTACACGGAGCCACCATAAACCATGCCCAAATAGTCAACACACGGGCTTTCTGGAAAAAGTA
GAAACCACACGGCTGATAATACCGAATCCAGGAAGAATTAAAATATAATAACATTATTTTGGCTCACTGGCGGAAGGGAAGAGCCCGGTAGAGCGCGCCGCCGCTTGCGATGGATAGGAC
TGTAAATTAAATTAAAGACTTCCAACAAATAATAACCAAATTGCCCCTACGTATGGAAGGCTGAAGGCGCAAGAGCGCTCTTTTGTTTTATTGAGAGAATTCTCGCGGAAAACCATGACC
AACTTATCTTGTCGTTGTACCATCTATGATGTCATCTTGCAGTTTTCCCATCTTGCCTGGATACAGACGGAGAGGAAATCAGGTGGTCTTGGTGACCTGTCATACCCGCTGGTTTCTGAC
ATCACGAAGGACATTGCAAGACAATACAACGTCCTGATTGAGGAGGAG
AGGTATGTGCTCGTATGTTCATGAAGGATCCCTAGGAAAGGAGGGCTTGGCTGACGTTTCGGTGTCTGTGCA
TTGCACGCATATTGACTTCGTCTCGAGCTTGTACGGCCGAGATGAGAATCGTATTGCCAAAGTTCAGTTGCCTGTGTGTGGACGTGGTTGTAAAATGGGGCTTGTGAATGCGAACTTTGC
AGTCAATCTGATTTTGACGTGGATGGGAATGTGAGGGTTAAAAGGAGCATAGTGCTCTCTCTCTCTTTCTCTCTTTCTTTCACTTTCTCTCTTTCTCTCTTGCTTTCACTTTCTCTCTTT
CTGGTATGGATTTGTATGTCTCTGACTCTCTTCTTTGCGATTGCGCAAAGTAGCTTTGCTACAGGTTGCTTCAACTCACTGATGTTCTCGTGTCTATGGTGTTCTTGGTGGTGCTCTTTT
TCTGCGGTGCAGGGTGTGGCTCTTCGTGGGCTTTTCATCATTGACACAGAGGGCGTTATCCAACATGCAACGATCAACAACTTGGCCATTGGCAGAAGTGTGGATGAGACGCTCAGGACA
TTGCAG
AGGTAGGGTGCCCCTTCTACTCATGTAGCATGGCCACAATTCTGTAATTCTAGGCATTCTCTTCAAGTAGAATGTAGCAGGAACACGCTCTGTGTGTGCGTTTCACCCATTGTA
TCTCTACATGCACTCGAGACCTGCCACCAGGAATTTGTTACATTGCCACTGTTCCTGAACTATGGGCCTCGCTCCGCTACTCACCAGATGATCTGCAAAATGAGAATGAATCTTCCGCTG
GAACGTGGAAATGTACACCACCATGTTTTTTGTCTTTTGTGCATGTGGTGAGTAGTGGAGCGAGGCCCTATTTTGCTGAACCGGGGATTCCCAACCCTTGGGTCGCTGAGACTCGGGTGT
TGGTGGGCAGAGGTCGATGTTTGTTTTTGAGGGGTTCTTGCCGTTGAGCTTGCCATCCCAATCGTGGTGGGCTGTGGATGTTTCTCCTCCTTTTTTCTGGCTCTTTTTTTTGTGGCACCT
CTAGGCCTAGTCTGGGATATTGCTATGATGCTACACTGCTCCTGTAGATTGTCATGACCCAGTGAAGCTTTTGGGTTGTTGATTGCATATACTGTGAAGCTGAAGGGCGAATGTTGGCCT
CTGTGGAGATGTGATTAGACTTCAGAGATACGAGTGGAAACACAGACACTGGGCTTCTACATAACTAACCAGTGATACCTGGTGGTGGTGGCGTGTTGGCTTTGCTGTGTGTAAAACTAT
TGTGAGCAGGCTGTGCAGTATGTCCAAGAGAACCCAGATGAGGTTTGCCCTGCTGGGTGGAAGCCTGGGGAGAAATCCATGAAGCCCGACCCTAAGGGAAGCAAGGAGTACTTCGCAGCA
ATTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGACTACCCTTCACGCATCTCTTTCTACTGCCGCAGTAGGGTTGTCCCACAATGGCGGGATCGGGACGCAATGCCAGCGGCGATCTGCTACGAGCGCGTTGCCAGCTGTCAAG
TTGACGACCTATGAGGGACTCGGAAAGGCGTCCCGCCTGACGGCGGACGTTGTGCCACGTGTCAGCACAAGGAAGAACCTCAAGTGCGGTGCCGTTTCTTCACCGGACTCGTCATCGAAG
ACGCTTGACATCCGAGCG
CATTGCCAGCCTTTGGTGGGAAACAAGGCTCCTGATTTTGAAGCCAAAGCCGTCTTTGACCAAGAATTTATCGAGGTTAAGCTGTCAGATTACCAGGCGCAG
GGCAAGTACGTAGTGCTGTTCTTCTACCCTCTGGACTTCACGTTTGTGTGCCCGACGGAGATCACGGCCTTCAGTGATCGGTATGCGGAGTTTGCAGCACTCAATACCGAAGTGCTGGGC
GTTAGTGTGGACAGTGTG
TTTTCCCATCTTGCCTGGATACAGACGGAGAGGAAATCAGGTGGTCTTGGTGACCTGTCATACCCGCTGGTTTCTGACATCACGAAGGACATTGCAAGACAA
TACAACGTCCTGATTGAGGAGGAG
GGTGTGGCTCTTCGTGGGCTTTTCATCATTGACACAGAGGGCGTTATCCAACATGCAACGATCAACAACTTGGCCATTGGCAGAAGTGTGGATGAG
ACGCTCAGGACATTGCAG
GCTGTGCAGTATGTCCAAGAGAACCCAGATGAGGTTTGCCCTGCTGGGTGGAAGCCTGGGGAGAAATCCATGAAGCCCGACCCTAAGGGAAGCAAGGAGTAC
TTCGCAGCAATTTAA

Retrieve as FASTA