View Redoxidase 12968

Entry information : CbraPrx11 (g46327.t1/CHBRA670g00030)

Entry ID	12968
Creation	2014-09-09 (Christophe Dunand)
Last sequence changes	2016-07-28 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2016-07-28 (Christophe Dunand)

Peroxidase information: CbraPrx11 (g46327.t1/CHBRA670g00030)

Name (synonym)

CbraPrx11 (g46327.t1/CHBRA670g00030)

Class

Class III peroxidase [Orthogroup: Prx079]

Taxonomy

Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara

Organism

Chara braunii [TaxId: 69332 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CbraPrx11 start..stop	S start..stop
CbraPrx08	654	0	1..373	1..378
CbraPrx07	561	0	1..373	1..368
CbraPrx05	511	0	1..373	1..368
CbraPrx12	393	1.27e-136	1..373	1..369

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12968' 'join(108726..109847)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	108726..109847	1120
join(108726..109847)

Literature and cross-references CbraPrx11 (g46327.t1/CHBRA670g00030)

Protein sequence: CbraPrx11 (g46327.t1/CHBRA670g00030)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	373
PWM (Da):	39947.39
PI (pH):	8.74

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MDRLSSSAFW CSGRGGGGGA EGSRLYALCV LYCLWFSVAG VAAQTASVVI VHPRPGDRPP SPVYSSNPTK GVLDSSLYHP ADAQCLMAAI KKFATAVIVR DRTKAATLLR LVFHDCMTTG GGCEASILSD REINNKVNAD LKRVVPDIRS IRDKAGRACG VLPTLADTIA RAAAAAVTFT GLNDVVSVGF DLGRRDLARN QPGNEPTTLP NENQSLDAIL SLFATFGLTD KESTVWSIGG HSIGVADCIH FSSRLSNESx RPGCLHPADP TLDPGLACKL ARHCRINKDI RLPFDFRTPF SLDTSYFQLL LKHQGLLRTD QAFAVHPRTS AFITQYATSP GLFSGDFLKA FVKVSLFNVN
SAQTAPPTKY YYP

Retrieve as FASTA

Remarks

Complete sequence from RNA seq and genomic (scaffold_670, no intron).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGATCGTC TGTCGAGTTC TGCGTTTTGG TGTTCGGGAA GAGGAGGAGG AGGAGGAGCA GAAGGTAGTC GCCTATACGC CCTCTGCGTG CTTTATTGCT TGTGGTTTTC TGTGGCGGGG GTCGCTGCCC AGACTGCCAG CGTTGTGATT GTTCATCCTC GTCCTGGTGA TCGCCCTCCT TCTCCGGTGT ACTCTTCTAA CCCCACCAAA GGTGTTCTGG ATTCTTCTCT TTACCATCCT GCAGATGCAC AGTGTCTCAT GGCAGCAATC AAGAAGTTTG CTACCGCCGT AATCGTGCGC GATCGGACGA AGGCTGCGAC GCTGTTGCGA CTCGTTTTCC ACGACTGCAT GACGACGGGC GGCGGCTGCG AGGCGTCTAT TCTGAGCGAT CGCGAGATCA ACAATAAAGT CAACGCCGAC TTGAAGAGGG TTGTCCCCGA CATCCGCAGC ATTCGAGACA AGGCGGGAAG AGCATGCGGC GTGCTTCCGA CCTTGGCCGA CACCATAGCC AGAGCTGCCG CTGCCGCCGT CACCTTCACC GGCCTCAACG ATGTCGTTTC GGTTGGGTTC GACTTGGGAC GACGGGACCT CGCTCGCAAT CAGCCTGGCA ACGAACCGAC TACTTTGCCG AACGAGAACC AGTCATTGGA CGCCATTTTG TCATTGTTTG CTACCTTCGG CTTAACCGAC AAGGAGAGCA CCGTGTGGTC CATAGGCGGC CACAGYATCG GGGTTGCCGA TTGCATCCAT TTCAGCTCGA GATTGAGCAA TGAGAGCnCT CGTCCGGGCT GCTTGCATCC GGCGGATCCG ACGCTCGATC CGGGTCTGGC TTGCAAATTG GCGCGACACT GCCGCATCAA CAAGGACATC CGCTTGCCCT TCGACTTTCG GACTCCTTTC TCTCTGGACA CCAGCTACTT CCAGCTGCTG CTGAAGCACC AAGGGCTTCT GAGAACAGAT CAAGCATTCG CTGTCCATCC CCGAACGTCA GCTTTCATAA CTCAGTACGC CACTTCGCCT GGACTATTCA GCGGAGACTT CCTCAAGGCG TTCGTCAAGG TATCGCTCTT TAATGTCAAC
AGCGCCCAGA CTGCGCCGCC GACCAAGTAT TATTACCCTT AA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA