Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
369 (319) |
| PWM (Da): |
37973.15 (32998.8) |
Transmb domain: |
i34-53o |
| PI (pH):
| 8.59 (7.68) |
Peptide Signal:
| cut: 51 range:51-369 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDCVSSSAFG CSGGKGRGGG GGGGGGRRRR RSRLYGVCLF FCLCFSAAVA GPATRPPPPV YASSPTKGDI DSSLYYPADA SCLMAAIKTA TTAILSQRQS RAATLLRLVF HDCMTKGGGC
DASILKPAEI NNPVNDGLSK VVDIITAVRK QAATQCGVLP TLADTIARAA AAAVSFSGLG DVVASGFKLG RRDVAPSQTG DNPATLPNEN QPLDDILNSF ASFGLSVQES TVWSIGGHSI
GEAGCIHFTN RLNTSGGAGS CLPPVDPTLD PVLACKLAAT CAAGAKGANF DFVTPKVLDV TYFQLLLKKQ GLLKSDQAFA GNARTAAYIQ LYANSPGQFA ADFLAAYVKV SLFNINGPTT
APPTQYYFP
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Retrieve as FASTA
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| Remarks |
Complete sequence from RNA seq and and genomic (scaffold_670, no intron). |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATTGTG TGTCGAGTTC TGCGTTTGGT TGTTCGGGAG GAAAGGGCCG GGGAGGAGGG GGGGGAGGAG GAGGAGGACG ACGACGACGA CGTAGTCGTC TGTACGGCGT CTGCCTCTTT
TTCTGCTTGT GTTTCTCTGC GGCGGTGGCC GGCCCCGCCA CTCGCCCTCC TCCTCCGGTG TACGCTTCTA GCCCGACGAA GGGTGATATC GATTCTTCTC TTTATTATCC TGCAGATGCA
TCGTGTCTTA TGGCAGCCAT CAAGACGGCC ACTACTGCTA TACTCAGCCA ACGTCAGTCC AGGGCTGCGA CGCTGCTGCG GCTCGTTTTC CACGACTGCA TGACCAAGGG CGGCGGCTGC
GACGCCTCCA TTCTGAAGCC TGCCGAGATT AACAATCCCG TCAACGACGG CTTGAGCAAG GTGGTCGATA TCATCACCGC CGTTCGCAAG CAGGCAGCAA CCCAATGCGG CGTGCTTCCC
ACGCTGGCGG ACACCATCGC CAGAGCTGCT GCTGCCGCCG TCTCCTTCTC CGGCCTCGGC GATGTCGTTG CCTCCGGCTT CAAGCTGGGA AGACGGGACG TCGCTCCCAG TCAGACTGGC
GACAATCCCG CTACTCTGCC CAACGAGAAC CAACCATTGG ACGACATCTT AAACTCCTTT GCTAGCTTCG GCTTAAGCGT CCAGGAGAGC ACCGTGTGGT CGATAGGCGG GCACAGCATC
GGCGAGGCCG GTTGTATCCA TTTCACTAAC AGATTGAACA CTTCGGGCGG TGCGGGAAGC TGCCTGCCAC CGGTAGATCC GACCCTGGAC CCCGTCCTGG CTTGCAAGTT GGCCGCAACG
TGTGCCGCCG GGGCTAAGGG CGCCAACTTC GACTTCGTTA CTCCGAAGGT TCTGGACGTC ACCTACTTCC AACTGCTGTT GAAGAAGCAA GGGCTTCTGA AATCAGATCA AGCGTTCGCA
GGAAATGCAC GGACGGCAGC GTACATTCAG CTGTACGCCA ATTCGCCGGG CCAATTCGCG GCAGACTTCC TCGCCGCGTA CGTAAAGGTG TCGCTCTTTA ATATCAATGG GCCAACGACT
GCACCCCCGA CGCAGTATTA TTTCCCTTAG
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Retrieve as FASTA
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|
CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATTGTG TGTCGAGTTC TGCGTTTGGT TGTTCGGGAG GAAAGGGCCG GGGAGGAGGG GGGGGAGGAG GAGGAGGACG ACGACGACGA CGTAGTCGTC TGTACGGCGT CTGCCTCTTT
TTCTGCTTGT GTTTCTCTGC GGCGGTGGCC GGCCCCGCCA CTCGCCCTCC TCCTCCGGTG TACGCTTCTA GCCCGACGAA GGGTGATATC GATTCTTCTC TTTATTATCC TGCAGATGCA
TCGTGTCTTA TGGCAGCCAT CAAGACGGCC ACTACTGCTA TACTCAGCCA ACGTCAGTCC AGGGCTGCGA CGCTGCTGCG GCTCGTTTTC CACGACTGCA TGACCAAGGG CGGCGGCTGC
GACGCCTCCA TTCTGAAGCC TGCCGAGATT AACAATCCCG TCAACGACGG CTTGAGCAAG GTGGTCGATA TCATCACCGC CGTTCGCAAG CAGGCAGCAA CCCAATGCGG CGTGCTTCCC
ACGCTGGCGG ACACCATCGC CAGAGCTGCT GCTGCCGCCG TCTCCTTCTC CGGCCTCGGC GATGTCGTTG CCTCCGGCTT CAAGCTGGGA AGACGGGACG TCGCTCCCAG TCAGACTGGC
GACAATCCCG CTACTCTGCC CAACGAGAAC CAACCATTGG ACGACATCTT AAACTCCTTT GCTAGCTTCG GCTTAAGCGT CCAGGAGAGC ACCGTGTGGT CGATAGGCGG GCACAGCATC
GGCGAGGCCG GTTGTATCCA TTTCACTAAC AGATTGAACA CTTCGGGCGG TGCGGGAAGC TGCCTGCCAC CGGTAGATCC GACCCTGGAC CCCGTCCTGG CTTGCAAGTT GGCCGCAACG
TGTGCCGCCG GGGCTAAGGG CGCCAACTTC GACTTCGTTA CTCCGAAGGT TCTGGACGTC ACCTACTTCC AACTGCTGTT GAAGAAGCAA GGGCTTCTGA AATCAGATCA AGCGTTCGCA
GGAAATGCAC GGACGGCAGC GTACATTCAG CTGTACGCCA ATTCGCCGGG CCAATTCGCG GCAGACTTCC TCGCCGCGTA CGTAAAGGTG TCGCTCTTTA ATATCAATGG GCCAACGACT
GCACCCCCGA CGCAGTATTA TTTCCCTTAG
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Retrieve as FASTA
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