Entry information : CbraAPx07 (g40382.t1)
Entry ID 12970
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2014-09-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-09-10 (Christophe Dunand)
Peroxidase information: CbraAPx07 (g40382.t1)
Name (synonym) CbraAPx07 (g40382.t1)
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraAPx07
start..stop
S start..stop
CbraAPx04 556 0 100..480 1..365
NhyAPx05 434 6e-150 134..480 122..462
CvuAPx05 429 1e-149 135..479 6..351
NhyAPx02 428 2e-147 134..480 121..461
Literature and cross-references CbraAPx07 (g40382.t1)
Protein sequence: CbraAPx07 (g40382.t1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   480
PWM (Da):   %s   52330.28 Transmb domain:   %s   o462-479i
PI (pH):   %s   4.48
Sequence
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Send to Peroxiscan
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MTVRCIRGTK QSRAIFTRVP PGTDNDEDDD DEEEEEEEDG DDDDDDDDDD DDDDDDDDDD DDGAPVRMRF NGVWRPSLGS NQFEAGSNTI GRRVVSLDSM GSRTGSRASK VGGKRSSAGG  QSSSVPPRWP PQVVLEQLRG AQEDMRALIK AKNCNPIFVR LAWHDAGTYN QNLAGWPCAG GANGTLRFKT QLSHECNAGL LNAFKLLDPI RVKYPAISNA DLLQLAGATG IEMAGGPTLP  MRYGRIDAPS EEFCAPDNVL PMANPPDPAA HLRSVFYRMG FTDKDIVALS GAHTLGRARP ERSGFGKIHT PYTKDGPGAP GGQSWTKDWL KFDNSYYKEV RDKTDEHLLV LPTDAVLFQD  EGFKVYAEKY AEDQDAFFRD YAEAHVKLSN LGCKFDPPEG MRLDDNPQLS DGWTEKASTP TQGQKATMYS PTTTGRSSPA ATSSSRFTAA AINFPQPSTT NFLYAVVIVG MVAVLVKLLT 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (scaffold_552, no intron).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGGTGC GTTGTATTCG GGGAACGAAG CAATCAAGGG CAATATTTAC CCGAGTGCCG CCTGGGACTG ATAATGATGA GGATGATGAT GATGAGGAGG AGGAGGAGGA GGAGGATGGT  GATGATGATG ATGATGATGA TGATGATGAT GATGATGACG ATGATGATGA TGATGATGAT GATGATGGTG CTCCAGTGAG AATGCGATTC AATGGCGTAT GGCGCCCGTC ACTTGGAAGC  AACCAATTTG AAGCGGGTTC CAACACCATA GGGCGACGGG TGGTGTCACT GGATAGCATG GGCTCGCGAA CAGGGTCGCG GGCCTCCAAG GTAGGAGGGA AGCGGAGCTC GGCAGGGGGA  CAAAGTAGTT CGGTGCCTCC CAGGTGGCCT CCCCAGGTGG TACTCGAGCA ACTGAGGGGT GCACAGGAAG ACATGAGGGC TCTGATAAAG GCGAAGAATT GCAACCCTAT TTTTGTTCGA  CTGGCATGGC ATGACGCAGG AACTTACAAC CAGAACCTTG CAGGGTGGCC ATGTGCAGGG GGCGCGAACG GTACCCTTCG ATTCAAAACC CAGCTGAGTC ATGAGTGCAA CGCAGGCTTG  CTGAACGCGT TCAAGCTGCT TGATCCCATC AGAGTGAAGT ACCCTGCAAT TAGTAATGCG GATCTGCTGC AGCTCGCAGG TGCTACTGGA ATCGAGATGG CAGGAGGGCC GACGCTCCCC  ATGAGGTATG GTCGTATTGA CGCTCCATCC GAAGAGTTCT GCGCTCCCGA CAACGTCTTA CCCATGGCTA ATCCTCCTGA CCCGGCTGCG CATCTCCGAA GTGTGTTCTA CAGAATGGGC  TTTACCGACA AGGACATCGT AGCACTCTCT GGAGCGCACA CGCTAGGCCG AGCTCGACCG GAACGCAGTG GGTTTGGCAA GATCCATACA CCCTACACCA AGGATGGACC AGGTGCACCA  GGCGGTCAAT CCTGGACCAA AGACTGGCTC AAATTTGACA ACAGCTACTA CAAGGAAGTA AGGGACAAAA CCGACGAGCA TCTGCTGGTC TTGCCCACCG ACGCTGTGCT GTTTCAAGAT  GAAGGGTTCA AGGTTTATGC AGAGAAGTAT GCCGAGGATC AGGATGCGTT TTTCCGGGAC TACGCTGAGG CGCATGTGAA GCTTAGCAAC TTGGGCTGCA AGTTCGATCC CCCTGAAGGT  ATGCGGCTCG ACGACAATCC TCAATTGTCA GACGGATGGA CGGAGAAGGC TTCAACGCCA ACACAGGGCC AGAAAGCGAC CATGTACTCT CCCACCACCA CGGGCCGCTC CAGTCCTGCA  GCGACATCGT CCTCCAGATT CACTGCTGCA GCTATCAACT TCCCTCAACC GTCTACCACT AACTTTCTAT ACGCCGTGGT GATAGTCGGA ATGGTAGCTG TACTTGTGAA GCTGCTCACC 
TGA 

Retrieve as FASTA