Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
404 (296) |
| PWM (Da): |
44699.38 (31675.6) |
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| PI (pH):
| 7.82 (7.68) |
Peptide Signal:
| cut: 33 range:33-328 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MNDKDQLKRD LHKALLNSKV IAFPIAVRQA WHSSGTYDKH SNTGGSNGAT MRFAPEKDDP ANNGLGIVRD MLHEVKKVHP NISEADLYTY AGALAVEFAG GPHVPYLFGR TDDSTNARCP
MHGRLPDASQ GKDHLRDVFH RMGMSDRDIV ALSGAHTLGR CHFVRSGYDG PWTHNPLKFD NEYFRNLVSL TWVPREWDGE MQYTDKETKT LMMLPTDVAL IRDGTFRKYV ELYAKDQEAF
FRDFADAYSR LLALGVPHCC PHAQAQKAGE MKRKSAKFRE SAMHGVVEIK KLAEGADVRE GDPGSGRTAL HKAAYWGHAH TIQTLVDLGV PLNAQDSDGD TALHDAARFG HLEVVKQLLN
ARGVDIGLRN RQGLDALGLA KEYGKRDVAD ALEQFKRNGG GSRL
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Retrieve as FASTA
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| Remarks |
Complete sequence from DNA (chromo 2, no intron) and RNA seq. |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAACGATA AAGATCAATT AAAGAGAGAT TTGCACAAAG CTCTGTTAAA CTCAAAAGTC ATCGCGTTCC CGATCGCAGT CAGACAAGCG TGGCACTCCT CCGGGACGTA CGATAAACAC
AGTAATACCG GTGGGTCGAA CGGCGCGACC ATGCGATTTG CCCCAGAGAA AGACGACCCG GCGAATAACG GGTTAGGCAT CGTTCGAGAC ATGCTTCACG AGGTGAAGAA AGTACACCCG
AACATATCCG AGGCGGATTT GTATACCTAC GCCGGGGCGT TGGCGGTGGA ATTCGCCGGT GGGCCGCACG TGCCGTACTT GTTCGGGAGG ACGGACGATT CGACGAACGC GAGGTGCCCT
ATGCACGGAC GGTTACCGGA CGCGAGTCAA GGAAAAGACC ATTTGAGAGA CGTGTTCCAC AGAATGGGCA TGAGCGATCG AGACATCGTT GCGTTGAGTG GAGCGCACAC GTTAGGACGG
TGTCACTTCG TTCGAAGCGG ATACGATGGT CCTTGGACGC ACAATCCTCT GAAGTTTGAT AACGAGTATT TTCGAAACTT GGTGTCCTTG ACCTGGGTAC CGAGAGAGTG GGACGGAGAG
ATGCAATACA CGGATAAAGA GACGAAAACG CTGATGATGT TACCGACAGA CGTGGCGTTG ATACGAGATG GAACGTTTCG CAAGTACGTG GAGTTATACG CGAAGGATCA AGAGGCGTTT
TTTCGCGATT TCGCGGACGC GTATTCGCGG TTGTTGGCGT TGGGCGTCCC GCACTGCTGT CCGCACGCGC AAGCGCAGAA AGCTGGAGAG ATGAAACGGA AATCGGCCAA GTTTCGCGAG
AGCGCGATGC ACGGTGTCGT GGAGATTAAA AAGTTAGCAG AGGGTGCGGA CGTGAGAGAG GGTGATCCAG GGAGCGGGAG AACGGCGTTG CACAAAGCCG CGTATTGGGG ACACGCGCAC
ACGATTCAAA CGTTGGTCGA TTTGGGCGTC CCTCTCAACG CGCAAGATTC CGATGGCGAT ACCGCGTTAC ACGATGCCGC CAGGTTTGGT CACTTGGAAG TCGTGAAGCA GTTGTTGAAC
GCGCGAGGTG TTGATATCGG TTTAAGAAAT AGACAAGGAT TGGACGCTTT AGGATTGGCG AAAGAATACG GGAAACGAGA CGTCGCGGAC GCGTTGGAAC AGTTCAAAAG GAACGGCGGC
GGAAGCAGAT TATAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAACGATA AAGATCAATT AAAGAGAGAT TTGCACAAAG CTCTGTTAAA CTCAAAAGTC ATCGCGTTCC CGATCGCAGT CAGACAAGCG TGGCACTCCT CCGGGACGTA CGATAAACAC
AGTAATACCG GTGGGTCGAA CGGCGCGACC ATGCGATTTG CCCCAGAGAA AGACGACCCG GCGAATAACG GGTTAGGCAT CGTTCGAGAC ATGCTTCACG AGGTGAAGAA AGTACACCCG
AACATATCCG AGGCGGATTT GTATACCTAC GCCGGGGCGT TGGCGGTGGA ATTCGCCGGT GGGCCGCACG TGCCGTACTT GTTCGGGAGG ACGGACGATT CGACGAACGC GAGGTGCCCT
ATGCACGGAC GGTTACCGGA CGCGAGTCAA GGAAAAGACC ATTTGAGAGA CGTGTTCCAC AGAATGGGCA TGAGCGATCG AGACATCGTT GCGTTGAGTG GAGCGCACAC GTTAGGACGG
TGTCACTTCG TTCGAAGCGG ATACGATGGT CCTTGGACGC ACAATCCTCT GAAGTTTGAT AACGAGTATT TTCGAAACTT GGTGTCCTTG ACCTGGGTAC CGAGAGAGTG GGACGGAGAG
ATGCAATACA CGGATAAAGA GACGAAAACG CTGATGATGT TACCGACAGA CGTGGCGTTG ATACGAGATG GAACGTTTCG CAAGTACGTG GAGTTATACG CGAAGGATCA AGAGGCGTTT
TTTCGCGATT TCGCGGACGC GTATTCGCGG TTGTTGGCGT TGGGCGTCCC GCACTGCTGT CCGCACGCGC AAGCGCAGAA AGCTGGAGAG ATGAAACGGA AATCGGCCAA GTTTCGCGAG
AGCGCGATGC ACGGTGTCGT GGAGATTAAA AAGTTAGCAG AGGGTGCGGA CGTGAGAGAG GGTGATCCAG GGAGCGGGAG AACGGCGTTG CACAAAGCCG CGTATTGGGG ACACGCGCAC
ACGATTCAAA CGTTGGTCGA TTTGGGCGTC CCTCTCAACG CGCAAGATTC CGATGGCGAT ACCGCGTTAC ACGATGCCGC CAGGTTTGGT CACTTGGAAG TCGTGAAGCA GTTGTTGAAC
GCGCGAGGTG TTGATATCGG TTTAAGAAAT AGACAAGGAT TGGACGCTTT AGGATTGGCG AAAGAATACG GGAAACGAGA CGTCGCGGAC GCGTTGGAAC AGTTCAAAAG GAACGGCGGC
GGAAGCAGAT TATAA
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Retrieve as FASTA
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