The peroxidases and oxidases database
Entry information : BprAPx-R01 (Bathy04g00180)
Entry ID 12992
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2014-12-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-12-04 (Christophe Dunand)
Peroxidase information: BprAPx-R01 (Bathy04g00180)
Name (synonym) BprAPx-R01 (Bathy04g00180)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Chlorophyta Prasinophyceae Bathycoccus
Organism Bathycoccus prasinos    [TaxId: 41875 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BprAPx-R01
start..stop		 S start..stop
OlAPx-R 329 2e-112 119..365 72..314
OtAPx-R 325 5e-111 120..365 66..307
MpuAPx-R 278 8e-92 123..365 108..343
EUgAPx-R01 245 1e-80 124..365 1..235
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 27067..28167 1101  
join(27067..28167)


exon

Literature and cross-references BprAPx-R01 (Bathy04g00180)
Cluster/Prediction ref. Genebank:   19016044
Protein sequence: BprAPx-R01 (Bathy04g00180)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   366 (300)
PWM (Da):   %s   40183.15 (32537.7)  
PI (pH):   %s   8.05 (9.69) Peptide Signal:   %s   cut: 24 range:24-323
Sequence 0
Send to BLAST
Send to Peroxiscan
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MTISSSSVLD ARARICERCC SYQHKKTRRR KSEPPFASSS SSSSTTTKVA AAAVVVASSS TQRNDENERT TSTTTKTHSN RRAFLVSSTS LFSLCVAAIA RYPLPSSKIA AHAATITIQN  EEEVRKNLRQ VLESKIQKTK CPAVLRVAFH DAGTFNKASN DGGMNGSVLY ELGRPESFGL KRGLNPIKEV YEEMKVRGFG DDTGGVSLAD CIACAGAYAI ELTGGPKFLE SIPLGRRDAS  SADPENRMPV ETLRGKEMRE HFQNLYGLSS QEMIALSGAH TIGQKGFGDP YTFDNEYFVT LKKDPWNLPN LTKDELEMNE HIGLLSDRYL AEDEENKKWI NKYAEDAGAF NKDFVEAYIK 
LTTLGV 

Retrieve as FASTA  
Remarks Complete sequence from DNA (chromo 4, no intron))
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGATAT CATCATCGTC GGTGTTGGAT GCGAGAGCGC GGATTTGTGA ACGATGCTGC TCGTATCAAC ACAAGAAAAC TCGGAGGAGA AAAAGTGAAC CGCCGTTTGC CTCGTCGTCA  TCATCGTCAT CGACGACAAC GAAAGTTGCT GCTGCTGCTG TTGTTGTTGC GTCTTCTTCG ACACAGCGTA ACGACGAGAA CGAAAGGACA ACGTCGACGA CAACTAAAAC TCATAGCAAC  AGACGAGCAT TTTTAGTCTC GTCCACTTCG TTGTTTTCTC TCTGTGTAGC GGCGATTGCT CGGTATCCTT TACCGTCGTC AAAAATCGCC GCCCACGCAG CAACAATAAC AATACAAAAC  GAAGAAGAAG TACGAAAAAA TTTACGCCAA GTGCTCGAGA GTAAAATACA AAAAACAAAG TGTCCGGCGG TGTTGAGAGT TGCATTTCAC GACGCGGGAA CGTTTAATAA AGCGTCGAAC  GATGGTGGAA TGAATGGGAG CGTTTTGTAC GAATTAGGAC GTCCAGAAAG TTTTGGTTTG AAGCGAGGAC TGAACCCGAT AAAAGAGGTG TACGAGGAGA TGAAAGTGAG AGGTTTCGGC  GACGACACCG GCGGAGTATC GTTAGCGGAT TGCATAGCTT GCGCAGGAGC TTACGCAATC GAACTCACTG GTGGCCCAAA ATTCTTAGAA TCCATCCCGC TTGGACGTAG AGACGCTTCC  TCTGCGGATC CAGAAAACCG CATGCCAGTC GAGACGCTTC GAGGAAAAGA GATGCGAGAA CATTTCCAAA ACTTGTACGG GTTATCCTCC CAGGAAATGA TTGCGCTTTC TGGAGCACAC  ACGATAGGAC AAAAAGGATT CGGTGACCCG TACACTTTCG ACAACGAGTA TTTCGTGACG TTAAAAAAGG ATCCGTGGAA CTTACCAAAC TTAACCAAAG ACGAGTTGGA GATGAACGAA  CACATCGGTT TGTTATCGGA CCGATACTTG GCTGAGGACG AAGAAAATAA AAAGTGGATT AATAAGTACG CCGAAGACGC TGGAGCGTTT AACAAAGATT TCGTCGAAGC TTACATCAAA 
TTGACGACAT TAGGAGTGTA A 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGATAT CATCATCGTC GGTGTTGGAT GCGAGAGCGC GGATTTGTGA ACGATGCTGC TCGTATCAAC ACAAGAAAAC TCGGAGGAGA AAAAGTGAAC CGCCGTTTGC CTCGTCGTCA  TCATCGTCAT CGACGACAAC GAAAGTTGCT GCTGCTGCTG TTGTTGTTGC GTCTTCTTCG ACACAGCGTA ACGACGAGAA CGAAAGGACA ACGTCGACGA CAACTAAAAC TCATAGCAAC  AGACGAGCAT TTTTAGTCTC GTCCACTTCG TTGTTTTCTC TCTGTGTAGC GGCGATTGCT CGGTATCCTT TACCGTCGTC AAAAATCGCC GCCCACGCAG CAACAATAAC AATACAAAAC  GAAGAAGAAG TACGAAAAAA TTTACGCCAA GTGCTCGAGA GTAAAATACA AAAAACAAAG TGTCCGGCGG TGTTGAGAGT TGCATTTCAC GACGCGGGAA CGTTTAATAA AGCGTCGAAC  GATGGTGGAA TGAATGGGAG CGTTTTGTAC GAATTAGGAC GTCCAGAAAG TTTTGGTTTG AAGCGAGGAC TGAACCCGAT AAAAGAGGTG TACGAGGAGA TGAAAGTGAG AGGTTTCGGC  GACGACACCG GCGGAGTATC GTTAGCGGAT TGCATAGCTT GCGCAGGAGC TTACGCAATC GAACTCACTG GTGGCCCAAA ATTCTTAGAA TCCATCCCGC TTGGACGTAG AGACGCTTCC  TCTGCGGATC CAGAAAACCG CATGCCAGTC GAGACGCTTC GAGGAAAAGA GATGCGAGAA CATTTCCAAA ACTTGTACGG GTTATCCTCC CAGGAAATGA TTGCGCTTTC TGGAGCACAC  ACGATAGGAC AAAAAGGATT CGGTGACCCG TACACTTTCG ACAACGAGTA TTTCGTGACG TTAAAAAAGG ATCCGTGGAA CTTACCAAAC TTAACCAAAG ACGAGTTGGA GATGAACGAA  CACATCGGTT TGTTATCGGA CCGATACTTG GCTGAGGACG AAGAAAATAA AAAGTGGATT AATAAGTACG CCGAAGACGC TGGAGCGTTT AACAAAGATT TCGTCGAAGC TTACATCAAA 
TTGACGACAT TAGGAGTGTA A 

Retrieve as FASTA