Entry information : PmeAPx03 (IOVS-2055466)
Entry ID 13006
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2014-12-03 (Bruno Savelli)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-12-03 (Christophe Dunand)
Peroxidase information: PmeAPx03 (IOVS-2055466)
Name (synonym) PmeAPx03 (IOVS-2055466)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pseudotsuga
Organism Pseudotsuga menziesii (Douglas-fir)    [TaxId: 3357 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmeAPx03
start..stop
S start..stop
ClibAPx02 495 0 1..249 1..249
PpAPx01 493 3e-180 1..249 1..249
PabAPx204 485 6e-176 1..249 59..307
PgAPx01 482 9e-176 1..249 1..249
Literature and cross-references PmeAPx03 (IOVS-2055466)
Protein sequence: PmeAPx03 (IOVS-2055466)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249
PWM (Da):   %s   27023.69  
PI (pH):   %s   5.85
Sequence
Send to BLAST
Send to Peroxiscan
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MVKAYPTVSA EYKAAIDKCK RKLRALIAEK NCAPIMVRIA WHSAGTYDVK TKTGGPFGTM RYAAELAHGA NSGLDIAVRL LEPIKEQFPI VSYADLYQLA GVVAVEVTGG PDIPFHPGRE  DKPAPPEEGR LPDATKGSDH LRDVFGHMGL DDKAIVALSG AHTLGRCHKE RSGFEGPWTS NPLIFDNSYF TELLTGEKEG LLQLPSDKAL LSDPSFAVYV QKYAQDEDAF FADYAEAHLK 
LSELGFADA 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq. IOVS-2055466-Pseudotsuga_menziesii
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAAGG CTTACCCCAC CGTGAGCGCC GAGTACAAGG CCGCCATTGA CAAATGCAAG AGGAAGCTCC GAGCTCTCAT CGCAGAGAAG AACTGTGCGC CGATTATGGT TCGAATCGCA  TGGCACAGCG CTGGAACATA CGATGTTAAG ACCAAAACCG GAGGGCCCTT CGGGACGATG AGATATGCGG CCGAGCTGGC CCACGGTGCT AACAGCGGTC TGGATATTGC TGTTAGGCTC  CTGGAGCCAA TCAAGGAACA GTTCCCCATA GTTTCCTATG CCGACCTTTA TCAGTTGGCT GGTGTAGTGG CTGTTGAAGT GACCGGAGGA CCTGATATTC CGTTCCATCC TGGAAGAGAA  GACAAGCCTG CGCCTCCAGA AGAGGGTCGT CTTCCTGATG CTACTAAAGG ATCTGATCAT CTGAGGGATG TTTTTGGTCA TATGGGTTTG GATGATAAGG CAATCGTGGC CTTATCTGGT  GCCCACACCT TGGGAAGATG CCACAAGGAG AGATCTGGAT TTGAAGGACC ATGGACCTCT AACCCTCTTA TCTTTGACAA CTCTTATTTC ACAGAGCTTT TGACTGGAGA GAAGGAAGGC  TTGCTTCAGT TGCCATCTGA TAAGGCACTG CTCTCTGATC CCAGTTTTGC AGTTTATGTT CAGAAGTATG CACAGGATGA AGATGCTTTC TTTGCTGACT ATGCAGAAGC TCACCTGAAG 
CTTTCTGAAC TTGGGTTTGC TGATGCT 

Retrieve as FASTA