Entry information : PmeAPx02 (IOVS-2011990)
Entry ID 13007
Creation 2014-11-19 (Bruno Savelli)
Last sequence changes 2014-12-03 (Bruno Savelli)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2014-12-03 (Christophe Dunand)
Peroxidase information: PmeAPx02 (IOVS-2011990)
Name (synonym) PmeAPx02 (IOVS-2011990)
Class Ascorbate peroxidase     [Orthogroup: APx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pseudotsuga
Organism Pseudotsuga menziesii (Douglas-fir)    [TaxId: 3357 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmeAPx02
start..stop
S start..stop
PabAPx01 328 2e-116 1..180 59..245
ChaAPx04 322 1e-113 1..180 55..241
PtaAPx01 319 1e-112 1..180 59..245
CmichAPx13 312 3e-110 1..180 34..220
Literature and cross-references PmeAPx02 (IOVS-2011990)
Protein sequence: PmeAPx02 (IOVS-2011990)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   180
PWM (Da):   %s   20046.12  
PI (pH):   %s   4.81
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TIRNEAELSH GANAGLDTAV KLLEPIKEQF PILSYADFYQ LAGVVAVEVT GGPSIPFHAG RTDQYDSPEE GRLDHLRTIF YRMGLEDKDI VALSGGHTLG RCHKERSGYE GPWTKNPLIF 
DNSYFKEILN GEREGLVQLP SDKALLEDPI FSKYVHLYAK DENAFFADYA EAHLKLSELG 

Retrieve as FASTA  
Remarks Partial sequence from RNA seq. IOVS-2011990-Pseudotsuga_menziesii
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACCATCAGGA ACGAGGCGGA ACTCTCTCAT GGTGCGAATG CAGGACTTGA CACTGCGGTG AAGCTCCTGG AACCCATCAA AGAACAGTTT CCCATTCTTA GCTACGCAGA CTTTTATCAG  CTTGCAGGAG TTGTAGCCGT TGAAGTTACA GGAGGGCCCT CAATACCTTT CCATGCAGGA AGGACAGATC AATATGATAG CCCTGAAGAA GGAAGACTGG ACCATCTTCG AACAATTTTC  TACAGAATGG GACTGGAAGA TAAGGATATA GTAGCACTCT CTGGAGGCCA CACTCTGGGA AGATGTCACA AGGAGAGATC TGGATACGAA GGTCCATGGA CGAAAAATCC GCTAATATTT  GATAATTCCT ACTTCAAAGA AATATTGAAT GGTGAACGTG AAGGCTTAGT ACAGCTCCCT TCTGACAAGG CTCTTTTGGA GGATCCTATA TTTAGTAAAT ATGTCCATCT ATATGCTAAG 
GACGAGAATG CATTCTTTGC TGATTATGCG GAGGCTCATC TGAAGCTTTC GGAGCTTGGG 

Retrieve as FASTA