Entry information : GbPrx12(Peroxidase72)
Entry ID 13082
Creation 2015-02-18 (Christophe Dunand)
Last sequence changes 2015-02-18 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-01 (Christophe Dunand)
Peroxidase information: GbPrx12(Peroxidase72)
Name GbPrx12(Peroxidase72)
Class Class III peroxidase    [Orthogroup: Prx119]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx12
start..stop
S start..stop
GbPrx54 547 0 13..334 14..337
GbPrx06 487 6e-175 13..334 15..339
GbPrx42 486 2e-174 4..334 3..338
GbPrx70 457 3e-163 33..331 39..336
Literature and cross-references GbPrx12(Peroxidase72)
Protein sequence: GbPrx12(Peroxidase72)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334
PWM (Da):   %s   36829.76  
PI (pH):   %s   9.63
Sequence
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Send to Peroxiscan
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MAIYDKHYST VHIVSQLFII LVLATSTVCS SELSPYFYNH TCPQALSIVK LKVKKAVEKE ARMAGSLLRL HFHDCFVQGC DASLLLDDTP KFRGEKTSNP NNKSARGFNV IDDIKRQLES  ECPGTVSCAD IVAIAARDSV VLTGGPEWTV QLGRRDSRSA SFSGSNQNIP APNSTLQSLI TKFKRQGLDE VDLVALSGSH TIGQSRCTSF KQRLYNQTGN GKPDSTIQAM FLTKLKSSCP 
RSGGDNNLSP LDFTSPTKFD NHYFNNLKSM KGLLNSDEEL YTKHNQLTVG IVNTYAADQK LFFKQFAKSM VKLGNIKPLT GSKGEIRHNC RRMN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (not predicted form SymDB, scaffold259) and RNA seq (gba_locus_1321_iso_1_len_1356_ver_2). No EST.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCATCT ATGATAAGCA TTACAGTACT GTTCACATTG TATCACAACT ATTTATTATT CTTGTTTTGG CAACTAGCAC TGTGTGCAGT TCTGAGTTGA GCCCATATTT CTATAACCAT  ACCTGTCCTC AGGCTCTCTC CATTGTCAAG TTAGCGGTAA AAAAGGCAGT AGAAAAAGAG GCTCGAATGG CAGGATCTTT ACTTCGTCTT CAGTTCCACG ATTGTTTTGT CCAGGTAAAA  TTTGTTTACA TTTTTATTTT CTCAGCTGAT CAATTCTGAA TTAATGTAAT TTGGTTTGTA TCTGCATATT CGAATTGCTT ACAGAAATCT CTATATGTCG ACTGCTAACA ATAAGCCGCG  TACTTAATAA TAACAAATCT TGACAGGGCT GCGATGCTTC CCTGTTGTTA GACGACACCC CCAAATTTAG AGGAGAAAAG ACATCAAACC CCAATAACAA ATCTGCGAGA GGATTTAACG  TGATAGACGA TATCAAAAGG CAGCTGGAGA GTGAATGCCC TGGAACTGTG TCTTGTGCTG ACATCGTTGC CATTGCTGCT CGCGATTCTG TTGTCCTGGT ATTATTATTA TTAGTTTTGA  AAATATATTT TACAATAGTT TAGTATTATT AGTTTTTTAA ATATATTTTA TAAGTAATAT TAGGACATCA ATATTAAAAC GCATGTAATA AATATCGGTG TGGCAGACTG GAGGACCAGA  GTGGACTGTA CAACTGGGAA GAAGGGACTC GAGAAGTGCA AGCTTTAGCG GTTCGAATCA GAACATTCCA GCGCCAAATT CTACTCTGCA GAGTCTCATT ACAAAATTCA AACGCCAAGG  CCTCGACGAG GTGGATTTGG TTGCACTCTC GGGTATGAAT TCATTTACAC ACTTCTCTAA ATTTACTTGT TTTTTTTATA TCGTTGCTAA TGACGATGAA ATTACAAAAT GCATTATTTG  CAAATTATGA GAATGCTGCA GGTAGCCACA CCATCGGCCA GTCTCGATGC ACGAGCTTTA AGCAGAGGCT GTACAATCAG ACTGGAAATG GGAAACCTGA TTCAACCATC CAAGCTATGT  TTTTGACAAA ATTGAAATCA AGCTGTCCAA GATCAGGTGG AGATAACAAC TTATCTCCCT TGGATTTCAC CAGCCCAACT AAATTTGACA ACCATTACTT CAACAACCTG AAGAGCATGA  AGGGACTGTT GAATTCGGAC GAGGAACTCT ATACCAAGCA CAACCAATTG ACAGTGGGGA TTGTGAATAC ATATGCAGCG GATGAGAAGC TCTTCTTCAA GCAGTTTGCC AAGTCGATGG 
TGAAGTTGGG CAACATAAAA CCCTTGACAG GATCCAAGGG AGAAATCCGA CACAACTGCC GCCGAATGAA TTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCATCT ATGATAAGCA TTACAGTACT GTTCACATTG TATCACAACT ATTTATTATT CTTGTTTTGG CAACTAGCAC TGTGTGCAGT TCTGAGTTGA GCCCATATTT CTATAACCAT  ACCTGTCCTC AGGCTCTCTC CATTGTCAAG TTAAAGGTAA AAAAGGCAGT AGAAAAAGAG GCTCGAATGG CAGGATCTTT ACTTCGTCTT CATTTCCACG ATTGTTTTGT CCAGGGCTGC  GATGCTTCCC TGTTGTTAGA CGACACCCCC AAATTTAGAG GAGAAAAGAC ATCAAACCCC AATAACAAAT CTGCGAGAGG ATTTAACGTG ATAGACGATA TCAAAAGGCA GCTGGAGAGT  GAATGCCCTG GAACTGTGTC TTGTGCTGAC ATCGTTGCCA TTGCTGCTCG CGATTCTGTT GTCCTGACTG GAGGACCAGA GTGGACTGTA CAACTGGGAA GAAGGGACTC GAGAAGTGCA  AGCTTTAGCG GTTCGAATCA GAACATTCCA GCGCCAAATT CTACTCTGCA GAGTCTCATT ACAAAATTCA AACGCCAAGG CCTCGACGAG GTGGATTTGG TTGCACTCTC GGGTAGCCAC  ACCATCGGCC AGTCTCGATG CACGAGCTTT AAGCAGAGGC TGTACAATCA GACTGGAAAT GGGAAACCTG ATTCAACCAT CCAAGCTATG TTTTTGACAA AATTGAAATC AAGCTGTCCA  AGATCAGGTG GAGATAACAA CTTATCTCCC TTGGATTTCA CCAGCCCAAC TAAATTTGAC AACCATTACT TCAACAACCT GAAGAGCATG AAGGGACTGT TGAATTCGGA CGAGGAACTC  TATACCAAGC ACAACCAATT GACAGTGGGG ATTGTGAATA CATATGCAGC GGATCAGAAG CTCTTCTTCA AGCAGTTTGC CAAGTCGATG GTGAAGTTGG GCAACATAAA ACCCTTGACA 
GGATCCAAGG GAGAAATCCG ACACAACTGC CGCCGAATGA ATTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAACCGCTCT TCCGATCTAT AGCTTACTGG CTCTCTCGTT CATCGGATTC GATTCCCATT GTTTATAGTA AAGATGGCCA TCTATGATAA GCATTACAGT ACTGTTCACA TTGTATCACA  ACTATTTATT ATTCTTGTTT TGGCAACTAG CACTGTGTGC AGTTCTGAGT TGAGCCCATA TTTCTATAAC CATACCTGTC CTCAGGCTCT CTCCATTGTC AAGTTAAAGG TAAAAAAGGC  AGTAGAAAAA GAGGCTCGAA TGGCAGGATC TTTACTTCGT CTTCATTTCC ACGATTGTTT TGTCCAGGGC TGCGATGCTT CCCTGTTGTT AGACGACACC CCCAAATTTA GAGGAGAAAA  GACATCAAAC CCCAATAACA AATCTGCGAG AGGATTTAAC GTGATAGACG ATATCAAAAG GCAGCTGGAG AGTGAATGCC CTGGAACTGT GTCTTGTGCT GACATCGTTG CCATTGCTGC  TCGCGATTCT GTTGTCCTGA CTGGAGGACC AGAGTGGACT GTACAACTGG GAAGAAGGGA CTCGAGAAGT GCAAGCTTTA GCGGTTCGAA TCAGAACATT CCAGCGCCAA ATTCTACTCT  GCAGAGTCTC ATTACAAAAT TCAAACGCCA AGGCCTCGAC GAGGTGGATT TGGTTGCACT CTCGGGTAGC CACACCATCG GCCAGTCTCG ATGCACGAGC TTTAAGCAGA GGCTGTACAA  TCAGACTGGA AATGGGAAAC CTGATTCAAC CATCCAAGCT ATGTTTTTGA CAAAATTGAA ATCAAGCTGT CCAAGATCAG GTGGAGATAA CAACTTATCT CCCTTGGATT TCACCAGCCC  AACTAAATTT GACAACCATT ACTTCAACAA CCTGAAGAGC ATGAAGGGAC TGTTGAATTC GGACGAGGAA CTCTATACCA AGCACAACCA ATTGACAGTG GGGATTGTGA ATACATATGC  AGCGGATCAG AAGCTCTTCT TCAAGCAGTT TGCCAAGTCG ATGGTGAAGT TGGGCAACAT AAAACCCTTG ACAGGATCCA AGGGAGAAAT CCGACACAAC TGCCGCCGAA TGAATTGAAT  TGTTGAAAAG CTTTTACAGT CAATAAAGGT AATGAGGTAT TGTTGGCTGC TCACGTACCC ATATACAGCT CGCAGGAATC AGGATCGTTC AGTCAGTCTC CATCAATAAA AGTAGTATTC  TCTCCTACTA CGTGTTACTT TACAGTGTTG CTTTTGTTCA TTAATAAGGT TTTGTTCCGC ACTGAGGAAC AATATATACG ATCACGTTTA AATTTTATAC AGTCTGAACT CTTTAATATG 
ATATATTATT ATGTGTTTTT TTGCCGTACG AATAAA 

Retrieve as FASTA