Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
323 (299) |
| PWM (Da): |
34572.95 (31875.5) |
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| PI (pH): |
4.64 (4.48) |
Peptide Signal: |
cut: 25 range:25-323 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGKHYLFAII VYFVSIGLRL SCEGMEVGFY SPTCPDAESV VRATVQKSFQ SDKTIAAALL RLHYHDCFVQ GCDGSVLIAG PKAENTASGH SGLRGFDVIE NAKKQLEGIC PGVVSCADIV
ALAARDAVAL SNGPDYDVPT GRRDGVVSSA KDASDMPDPT DSIQLLQQKF AAKGLSTSDL VVLNGAHTIG TTACFFIKDR LYNFPPAGDA DPTINPSYLG DLRAVCPWDG DDNVRLPLDR
GSEFNFDKQF FDNVMQGNGV LESDANMYED ASTRPYIDSY FGLLGGLLGP SFESDFAEAM IRMGQINVKT GSNGRIRRVC SAF
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (incorrect prediction from SymDB, splicing error) and RNA seq (gba_locus_21387_iso_8_len_1621_ver_2). No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGAAAGC ATTACTTATT CGCCATTATA GTATATTTTG TGAGCATAGG CCTGAGATTA AGCTGTGAAG GCATGGAAGT GGGGTTTTAC TCTCCCACAT GTCCTGATGC TGAATCCGTG
GTCCGGGCGA CTGTGCAGAA GAGCTTTCAA TCCGATAAAA CAATCGCAGC AGCGCTATTG CGCCTTCACT ATCATGATTG CTTCGTTCAA GGTTGCGATG GATCTGTACT CATCGCTGGT
CCAAAGGCCG AGAATACAGC TTCGGGTCAT TCTGGATTGC GTGGATTCGA TGTTATAGAA AATGCTAAGA AACAACTTGA AGGGATTTGT CCAGGAGTCG TTTCATGTGC TGATATAGTC
GCACTGGCCG CCAGAGACGC TGTAGCACTG AGTAATGGAC CAGACTATGA TGTGCCCACT GGAAGAAGGG ATGGTGTTGT GTCGTCTGCA AAGGACGCTT CTGACATGCC TGATCCCACC
GATTCAATCC AACTCCTTCA ACAAAAGTTC GCTGCAAAGG GCCTCTCCAC CTCTGATCTT GTTGTTCTCA ATGGAGCACA TACAATAGGG ACAACTGCCT GCTTCTTCAT AAAAGACCGC
CTCTACAACT TCCCACCAGC TGGAGACGCA GATCCAACCA TCAATCCCAG TTATTTGGGG GACCTGAGAG CAGTTTGCCC ATGGGATGGC GATGATAATG TGCGATTGCC TCTTGACAGA
GGCTCCGAGT TCAACTTCGA CAAACAATTT TTCGACAATG TGATGCAAGG AAACGGAGTG CTGGAATCTG ATGCAAACAT GTATGAAGAT GCTTCCACTC GTCCTTACAT AGACTCGTAC
TTTGGGCTTC TAGGTGGTCT GTTAGGCCCC TCCTTTGAAT CGGATTTTGC AGAGGCAATG ATCCGAATGG GTCAGATCAA CGTTAAAACT GGATCAAATG GAAGGATTCG CAGAGTTTGC
TCGGCCTTTT AA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCTCTGTCTG CTTTCTAGCC TCTTTTTTCG GCTACAAGTT GCTGAGATTT GTCTTCTACT CGTGACAGAC ACAGATGGAG GACACGAACG TGCACCGACA GATAATCTAG ATAAATACAT
TGGGAAGCAT CACTGGCACA CCCACTTTGA AAAATCTAGA TTCGATTTGC ACTCTATTCC ATGGGATTTG AACAGCTCGA GACACGTCTT TGTTGCTGTT GTATGTGTGC GGGTTGGGTT
GTTTCTGTGA TTATTAATGC TTTATGTATC CATAAATCTG ACACATAAAT ACCTCTGCCA ATCAGAAGGG ATTGAAGCTG GTTAATTATC CTCTGAGTAG GAGACATAGG AAATCGGAAT
GGGAAAGCAT TACTTATTCG CCATTATAGT ATATTTTGTG AGCATAGGCC TGAGATTAAG CTGTGAAGGC ATGGAAGTGG GGTTTTACTC TCCCACATGT CCTGATGCTG AATCCGTGGT
CCGGGCGACT GTGCAGAAGA GCTTTCAATC CGATAAAACA ATCGCAGCAG CGCTATTGCG CCTTCACTAT CATGATTGCT TCGTTCAAGG TTGCGATGGA TCTGTACTCA TCGCTGGTCC
AAAGGCCGAG AATACAGCTT CGGGTCATTC TGGATTGCGT GGATTCGATG TTATAGAAAA TGCTAAGAAA CAACTTGAAG GGATTTGTCC AGGAGTCGTT TCATGTGCTG ATATAGTCGC
ACTGGCCGCC AGAGACGCTG TAGCACTGAG TAATGGACCA GACTATGATG TGCCCACTGG AAGAAGGGAT GGTGTTGTGT CGTCTGCAAA GGACGCTTCT GACATGCCTG ATCCCACCGA
TTCAATCCAA CTCCTTCAAC AAAAGTTCGC TGCAAAGGGC CTCTCCACCT CTGATCTTGT TGTTCTCAAT GGAGCACATA CAATAGGGAC AACTGCCTGC TTCTTCATAA AAGACCGCCT
CTACAACTTC CCACCAGCTG GAGACGCAGA TCCAACCATC AATCCCAGTT ATTTGGGGGA CCTGAGAGCA GTTTGCCCAT GGGATGGCGA TGATAATGTG CGATTGCCTC TTGACAGAGG
CTCCGAGTTC AACTTCGACA AACAATTTTT CGACAATGTG ATGCAAGGAA ACGGAGTGCT GGAATCTGAT GCAAACATGT ATGAAGATGC TTCCACTCGT CCTTACATAG ACTCGTACTT
TGGGCTTCTA GGTGGTCTGT TAGGCCCCTC CTTTGAATCG GATTTTGCAG AGGCAATGAT CCGAATGGGT CAGATCAACG TTAAAACTGG ATCAAATGGA AGGATTCGCA GAGTTTGCTC
GGCCTTTTAA GTGGCCGAAT ACAATATCAT TGTTGACTTG AATACATATG CAAACCGGTA ATGTAATTTC TGTTCGAGAT GTAAATACTG AATAGAACAA TAAGAGCTAA AGCTATATGA
TGTTCCAATG TTTTCTCGTG TAATGTAACC TTAATGCATA CCTCGAAATC TATTCCTGTG CCTTGTCCTG AATCTAAAAC CTTTGTTTGG GTACTACTGT AAGCGACTTA TGGATACACT
GGTTAAGAGT TTGTGGCAAC AAAAATCAAT TTTGTGTTTA TAAGTTTGGC TTGAAATTGT G
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Retrieve as FASTA
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