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Entry information : GbPrx19(Ginbil_Gb_17552 /Ginbil_Gb_22518/ Peroxidase64)
Entry ID 13090
Creation 2015-02-19 (Christophe Dunand)
Last sequence changes 2015-02-19 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-24 (Christophe Dunand)
Peroxidase information: GbPrx19(Ginbil_Gb_17552 /Ginbil_Gb_22518/ Peroxidase64)
Name GbPrx19(Ginbil_Gb_17552 /Ginbil_Gb_22518/ Peroxidase64)
Class Class III peroxidase    [Orthogroup: Prx015]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx19
start..stop		 S start..stop
PpePrx30 423 5.58e-150 16..330 11..318
MguPrx45 416 2.65e-147 7..330 3..320
AtrPrx21 416 2.73e-147 9..327 1..312
EgrPrx95 416 3.32e-147 13..327 4..315
Literature and cross-references GbPrx19(Ginbil_Gb_17552 /Ginbil_Gb_22518/ Peroxidase64)
Protein sequence: GbPrx19(Ginbil_Gb_17552 /Ginbil_Gb_22518/ Peroxidase64)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330
PWM (Da):   %s   35819.93 Transmb domain:   %s   i5-27o
PI (pH):   %s   7.33
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAAIWGKIE MVVAVILIVM SRVVPLIRGL SMGYYDMSCP HVDLVVREAV QRAMESDNRV GAALLRMHFH DCFIRGCDGS VLIDSSGGNQ AEKDGPPNRS LHAFFVIDNA KANLESLCPA  TVSCADILAL AARDVVALSG GPNWEVPTGR KDGRISVAND TQSLPAPTFN VSQLIQAFSQ RGLSVHDLVA LSGGHTLGFS HCSSFQNRIH NFDSKHQVDV DPALHPLFAQ TLRNVCPAGN 
TQRNAGASLD STTNQFDNQY FKHLLQGKGL FTSDQALYSD ARTNGLVRQF AIDQNAFFDQ FVNSMLKMSS ILLPSQSHSS EVRLNCRKLN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction from SymDB; Ginbil_Gb_17552 (part exon 4) and Ginbil_Gb_22518 ; (last exon is missing)) and RNA seq (gba_locus_8314_iso_1_len_1169_ver_2). No EST found.
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGCTG CAATTTGGGG TAAGATTGAA ATGGTAGTGG CCGTGATACT GATAGTGATG AGTAGAGTGG TTCCATTGAT CAGAGGGCTT AGCATGGGGT ACTACGACAT GAGCTGTCCC  CATGTGGACC TGGTGGTGAG AGAGGCAGTG CAGAGAGCCA TGGAGTCTGA CAACCGTGTC GGTGCAGCCC TTCTGAGGAT GCATTTCCAC GACTGCTTCA TTCGGGGGTG TGATGGATCG  GTCCTGATAG ACTCGAGCGG GGGGAATCAA GCGGAGAAGG ATGGCCCTCC CAATCGCTCC CTCCACGCCT TCTTCGTCAT CGACAATGCC AAAGCCAACC TCGAATCTCT CTGTCCAGCC  ACTGTTTCTT GCGCCGACAT TCTTGCTCTA GCTGCCCGAG ACGTTGTAGC CTTGTCTGGA GGCCCAAACT GGGAGGTCCC CACCGGACGA AAGGATGGAA GAATTTCAGT GGCCAATGAC  ACCCAATCTC TGCCCGCCCC GACCTTCAAT GTCTCCCAAC TCATTCAGGC CTTCTCGCAG CGAGGGCTCT CAGTGCACGA CCTTGTGGCG CTCTCTGGTG GTCACACCCT GGGCTTCTCT  CACTGCTCCT CTTTCCAGAA CAGGATCCAT AACTTCGACT CCAAACACCA GGTGGATGTG GATCCCGCCC TGCACCCGCT GTTTGCTCAG ACTCTGAGGA ACGTCTGCCC CGCCGGCAAC  ACCCAACGGA ATGCGGGAGC CTCTCTGGAT TCCACCACCA ACCAGTTCGA CAACCAGTAT TTCAAGCATC TCCTCCAGGG CAAGGGACTC TTCACTTCCG ACCAGGCCCT CTATTCCGAT  GCTCGAACCA ACGGATTGGT CCGCCAATTT GCCATCGACC AGAACGCCTT CTTCGACCAA TTCGTCAATT CCATGCTCAA GATGAGTTCT ATCCTCCTCC CATCCCAATC CCATTCCTCA 
GAGGTCAGGC TCAACTGCCG CAAGCTCAAC TAA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATGGCTGCT GCAATTTGGG GTAAGATTGA AATGGTAGTG GCCGTGATAC TGATAGTGAT GAGTAGAGTG GTTCCATTGA TCAGAGGGCT TAGCATGGGG TACTACGACA TGAGCTGTCC  CCATGTGGAC CTGGTGGTGA GAGAGGCAGT GCAGAGAGCC ATGGAGTCTG ACAACCGTGT CGGTGCAGCC CTTCTGAGGA TGCATTTCCA CGACTGCTTC ATTCGGGGGT GTGATGGATC  GGTCCTGATA GACTCGAGCG GGGGGAATCA AGCGGAGAAG GATGGCCCTC CCAATCGCTC CCTCCACGCC TTCTTCGTCA TCGACAATGC CAAAGCCAAC CTCGAATCTC TCTGTCCAGC  CACTGTTTCT TGCGCCGACA TTCTTGCTCT AGCTGCCCGA GACGTTGTAG CCTTGTCTGG AGGCCCAAAC TGGGAGGTCC CCACCGGACG AAAGGATGGA AGAATTTCAG TGGCCAATGA  CACCCAATCT CTGCCCGCCC CGACCTTCAA TGTCTCCCAA CTCATTCAGG CCTTCTCGCA GCGAGGGCTC TCAGTGCACG ACCTTGTGGC GCTCTCTGGT GGTCACACCC TGGGCTTCTC  TCACTGCTCC TCTTTCCAGA ACAGGATCCA TAACTTCGAC TCCAAACACC AGGTGGATGT GGATCCCGCC CTGCACCCGC TGTTTGCTCA GACTCTGAGG AACGTCTGCC CCGCCGGCAA  CACCCAACGG AATGCGGGAG CCTCTCTGGA TTCCACCACC AACCAGTTCG ACAACCAGTA TTTCAAGCAT CTCCTCCAGG GCAAGGGACT CTTCACTTCC GACCAGGCCC TCTATTCCGA  TGCTCGAACC AACGGATTGG TCCGCCAATT TGCCATCGAC CAGAACGCCT TCTTCGACCA ATTCGTCAAT TCCATGCTCA AGATGAGTTC TATCCTCCTC CCATCCCAAT CCCATTCCTC  AGAGGTCAGG CTCAACTGCC GCAAGCTCAA CTAATTGCAA TTCCTCACTT ATTCCACCCT TATACCAATT TTACCTCAAA CACAATTACA ATTACAATTC CAGGGATGAT ACATGGCACC 
CAATATTACA AGTATCAACA CAAACCCACT TCGGTCCATT AATTCATTTT CTTTTATCTT CTTATTGCTT CACTTGTTCA TATTCATAG 

Retrieve as FASTA