Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
330 (304) |
| PWM (Da): |
35819.93 (32999.4) |
Transmb domain: |
i5-27o |
| PI (pH):
| 7.33 (8.56) |
Peptide Signal:
| cut: 34 range:34-337 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAAAIWGKIE MVVAVILIVM SRVVPLIRGL SMGYYDMSCP HVDLVVREAV QRAMESDNRV GAALLRMHFH DCFIRGCDGS VLIDSSGGNQ AEKDGPPNRS LHAFFVIDNA KANLESLCPA
TVSCADILAL AARDVVALSG GPNWEVPTGR KDGRISVAND TQSLPAPTFN VSQLIQAFSQ RGLSVHDLVA LSGGHTLGFS HCSSFQNRIH NFDSKHQVDV DPALHPLFAQ TLRNVCPAGN
TQRNAGASLD STTNQFDNQY FKHLLQGKGL FTSDQALYSD ARTNGLVRQF AIDQNAFFDQ FVNSMLKMSS ILLPSQSHSS EVRLNCRKLN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (incorrect prediction from SymDB; Ginbil_Gb_17552 (part exon 4) and Ginbil_Gb_22518 ; (last exon is missing)) and RNA seq (gba_locus_8314_iso_1_len_1169_ver_2). No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTGCTG CAATTTGGGG TAAGATTGAA ATGGTAGTGG CCGTGATACT GATAGTGATG AGTAGAGTGG TTCCATTGAT CAGAGGGCTT AGCATGGGGT ACTACGACAT GAGCTGTCCC
CATGTGGACC TGGTGGTGAG AGAGGCAGTG CAGAGAGCCA TGGAGTCTGA CAACCGTGTC GGTGCAGCCC TTCTGAGGAT GCATTTCCAC GACTGCTTCA TTCGGGGGTG TGATGGATCG
GTCCTGATAG ACTCGAGCGG GGGGAATCAA GCGGAGAAGG ATGGCCCTCC CAATCGCTCC CTCCACGCCT TCTTCGTCAT CGACAATGCC AAAGCCAACC TCGAATCTCT CTGTCCAGCC
ACTGTTTCTT GCGCCGACAT TCTTGCTCTA GCTGCCCGAG ACGTTGTAGC CTTGTCTGGA GGCCCAAACT GGGAGGTCCC CACCGGACGA AAGGATGGAA GAATTTCAGT GGCCAATGAC
ACCCAATCTC TGCCCGCCCC GACCTTCAAT GTCTCCCAAC TCATTCAGGC CTTCTCGCAG CGAGGGCTCT CAGTGCACGA CCTTGTGGCG CTCTCTGGTG GTCACACCCT GGGCTTCTCT
CACTGCTCCT CTTTCCAGAA CAGGATCCAT AACTTCGACT CCAAACACCA GGTGGATGTG GATCCCGCCC TGCACCCGCT GTTTGCTCAG ACTCTGAGGA ACGTCTGCCC CGCCGGCAAC
ACCCAACGGA ATGCGGGAGC CTCTCTGGAT TCCACCACCA ACCAGTTCGA CAACCAGTAT TTCAAGCATC TCCTCCAGGG CAAGGGACTC TTCACTTCCG ACCAGGCCCT CTATTCCGAT
GCTCGAACCA ACGGATTGGT CCGCCAATTT GCCATCGACC AGAACGCCTT CTTCGACCAA TTCGTCAATT CCATGCTCAA GATGAGTTCT ATCCTCCTCC CATCCCAATC CCATTCCTCA
GAGGTCAGGC TCAACTGCCG CAAGCTCAAC TAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CATGGCTGCT GCAATTTGGG GTAAGATTGA AATGGTAGTG GCCGTGATAC TGATAGTGAT GAGTAGAGTG GTTCCATTGA TCAGAGGGCT TAGCATGGGG TACTACGACA TGAGCTGTCC
CCATGTGGAC CTGGTGGTGA GAGAGGCAGT GCAGAGAGCC ATGGAGTCTG ACAACCGTGT CGGTGCAGCC CTTCTGAGGA TGCATTTCCA CGACTGCTTC ATTCGGGGGT GTGATGGATC
GGTCCTGATA GACTCGAGCG GGGGGAATCA AGCGGAGAAG GATGGCCCTC CCAATCGCTC CCTCCACGCC TTCTTCGTCA TCGACAATGC CAAAGCCAAC CTCGAATCTC TCTGTCCAGC
CACTGTTTCT TGCGCCGACA TTCTTGCTCT AGCTGCCCGA GACGTTGTAG CCTTGTCTGG AGGCCCAAAC TGGGAGGTCC CCACCGGACG AAAGGATGGA AGAATTTCAG TGGCCAATGA
CACCCAATCT CTGCCCGCCC CGACCTTCAA TGTCTCCCAA CTCATTCAGG CCTTCTCGCA GCGAGGGCTC TCAGTGCACG ACCTTGTGGC GCTCTCTGGT GGTCACACCC TGGGCTTCTC
TCACTGCTCC TCTTTCCAGA ACAGGATCCA TAACTTCGAC TCCAAACACC AGGTGGATGT GGATCCCGCC CTGCACCCGC TGTTTGCTCA GACTCTGAGG AACGTCTGCC CCGCCGGCAA
CACCCAACGG AATGCGGGAG CCTCTCTGGA TTCCACCACC AACCAGTTCG ACAACCAGTA TTTCAAGCAT CTCCTCCAGG GCAAGGGACT CTTCACTTCC GACCAGGCCC TCTATTCCGA
TGCTCGAACC AACGGATTGG TCCGCCAATT TGCCATCGAC CAGAACGCCT TCTTCGACCA ATTCGTCAAT TCCATGCTCA AGATGAGTTC TATCCTCCTC CCATCCCAAT CCCATTCCTC
AGAGGTCAGG CTCAACTGCC GCAAGCTCAA CTAATTGCAA TTCCTCACTT ATTCCACCCT TATACCAATT TTACCTCAAA CACAATTACA ATTACAATTC CAGGGATGAT ACATGGCACC
CAATATTACA AGTATCAACA CAAACCCACT TCGGTCCATT AATTCATTTT CTTTTATCTT CTTATTGCTT CACTTGTTCA TATTCATAG
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Retrieve as FASTA
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