Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
328 (303) |
| PWM (Da): |
34642.14 (32162.0) |
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| PI (pH):
| 4.46 (4.36) |
Peptide Signal:
| cut: 26 range:26-328 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MPMGKGGLTA VRMAVLISSI CCCSAQGGLR VGFYSDSCAD AESIVRSRVE ARIQSDPTIA AALLRLHYHD CFVQGCDGSI LIAGPNAERS APTHAGLRGF DVIEDAKTQV ELTCPEVVSC
ADIIALAARD ALLLSKGPNY DVPTGRRDGV ESSAADASDM PDPTDSVDLL LNKFAAKGLS ASDLVVLNGA HTIGTTACFF VQQRLYNFTT DGSSDPTINP ELLTELKQTC PAHGNVNARL
ALDIGSQFDF DTNFLSNVRE GNAVLESDAK LYEDTSTRAY IDSYFGLLSG ILGPYFASDF VDAIVRLGQI DVKSGSGGEI RRVCSAFN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (incorrect prediction from SymDB, splicing error intron 3) and RNA seq (gba_locus_20428_iso_1_len_1143_ver_2). No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCAATGG GGAAAGGCGG ATTAACGGCA GTGAGAATGG CAGTTTTGAT CTCTAGCATT TGTTGCTGCT CAGCCCAAGG CGGTTTGAGA GTGGGGTTTT ACTCCGATAG CTGTGCGGAT
GCAGAGTCTA TTGTGAGATC GAGGGTGGAG GCTCGAATCC AATCCGATCC AACAATTGCA GCAGCTCTGT TGCGTCTCCA CTATCACGAC TGCTTCGTTC AGGGCTGCGA CGGTTCGATA
CTCATTGCCG GACCCAATGC CGAGCGATCT GCACCAACTC ATGCGGGATT GCGTGGCTTT GACGTTATCG AAGATGCTAA AACACAAGTT GAATTAACTT GTCCGGAAGT GGTTTCATGT
GCAGATATAA TCGCACTTGC AGCACGAGAT GCTCTATTAT TGAGCAAGGG ACCCAACTAC GATGTACCCA CGGGGCGAAG GGACGGAGTG GAATCATCTG CTGCAGACGC TTCTGACATG
CCCGACCCCA CAGATTCAGT CGATCTCCTT CTGAACAAGT TCGCTGCAAA AGGACTTTCT GCATCTGATC TTGTTGTTCT CAATGGGGCT CATACAATCG GGACAACGGC CTGTTTCTTC
GTCCAGCAAC GCCTCTACAA TTTTACCACC GACGGAAGTT CCGATCCCAC CATTAATCCA GAGTTGTTAA CAGAGCTCAA ACAAACTTGT CCGGCTCATG GTAATGTTAA TGCGAGATTG
GCGCTCGACA TAGGAAGCCA ATTCGATTTC GACACCAATT TTCTGAGCAA TGTGAGAGAG GGAAACGCAG TACTGGAATC GGATGCCAAG TTGTATGAAG ACACCTCCAC TCGAGCGTAC
ATCGACTCAT ATTTTGGCCT TCTCAGTGGA ATTTTAGGTC CGTACTTCGC ATCGGATTTT GTAGATGCAA TTGTTCGGTT GGGTCAGATT GATGTCAAAA GTGGATCGGG TGGAGAGATA
CGGCGTGTTT GCTCAGCTTT CAACTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGATAATGCC AATGGGGAAA GGCGGATTAA CGGCAGTGAG AATGGCAGTT TTGATCTCTA GCATTTGTTG CTGCTCAGCC CAAGGCGGTT TGAGAGTGGG GTTTTACTCC GATAGCTGTG
CGGATGCAGA GTCTATTGTG AGATCGAGGG TGGAGGCTCG AATCCAATCC GATCCAACAA TTGCAGCAGC TCTGTTGCGT CTCCACTATC ACGACTGCTT CGTTCAGGGC TGCGACGGTT
CGATACTCAT TGCCGGACCC AATGCCGAGC GATCTGCACC AACTCATGCG GGATTGCGTG GCTTTGACGT TATCGAAGAT GCTAAAACAC AAGTTGAATT AACTTGTCCG GAAGTGGTTT
CATGTGCAGA TATAATCGCA CTTGCAGCAC GAGATGCTCT ATTATTGAGC AAGGGACCCA ACTACGATGT ACCCACGGGG CGAAGGGACG GAGTGGAATC ATCTGCTGCA GACGCTTCTG
ACATGCCCGA CCCCACAGAT TCAGTCGATC TCCTTCTGAA CAAGTTCGCT GCAAAAGGAC TTTCTGCATC TGATCTTGTT GTTCTCAATG GGGCTCATAC AATCGGGACA ACGGCCTGTT
TCTTCGTCCA GCAACGCCTC TACAATTTTA CCACCGACGG AAGTTCCGAT CCCACCATTA ATCCAGAGTT GTTAACAGAG CTCAAACAAA CTTGTCCGGC TCATGGTAAT GTTAATGCGA
GATTGGCGCT CGACATAGGA AGCCAATTCG ATTTCGACAC CAATTTTCTG AGCAATGTGA GAGAGGGAAA CGCAGTACTG GAATCGGATG CCAAGTTGTA TGAAGACACC TCCACTCGAG
CGTACATCGA CTCATATTTT GGCCTTCTCA GTGGAATTTT AGGTCCGTAC TTCGCATCGG ATTTTGTAGA TGCAATTGTT CGGTTGGGTC AGATTGATGT CAAAAGTGGA TCGGGTGGAG
AGATACGGCG TGTTTGCTCA GCTTTCAACT AGCTGCCAAA TAAAACAGAT CACGAACAGG ATGATCATAT AAAGCATTTT TGGGATCACG ATGCTTGTGA TGTGGATGTA TGCATTATCC
AAATGGAAAC CGAAAGAATT TGTATTTGTC CATATAATTA ATCAAACAAG GTTTCGCTAA AAA
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Retrieve as FASTA
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