Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
337 (302) |
| PWM (Da): |
35796.1 (31729.0) |
Transmb domain: |
i12-31o |
| PI (pH):
| 8.14 (7.68) |
Peptide Signal:
| cut: 36 range:36-337 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLFRMRMQQS MQPTIALMAF KAIVAFLCII VLAEGQGTKV GFYSSTCPRA ESIVKSTLQS HFTADQTIAA GILRLFFHDC FVQGCDGSIL ITGPSAEKNS LTNLGLRGFE VIEDAKTQLE
AACPGIVSCA DILALAARDA VVVSKGLSWS VPTGRRDGLV SSSSDAANLP TPADSISVQK QKFSDKGLNA EDLVTLVGAH TIGQTDCQFF SYRLYNFTAA GNADPTVSSG YLTQLQSLCP
AGGDGSKRVA LDKGSQTAFD ASFFKNVRDG NAVLESDQRL WGDDSTKSVV QKYAGSIRGV VGVRFDVAFG KAMVKMSNIG VKTGTQGEIR KVCSAFN*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic, RNA seq (gba_locus_22424_iso_3_len_1338_ver_2, few mismatches) and 1 EST. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTGTTTA GAATGAGAAT GCAGCAAAGC ATGCAGCCTA CAATTGCCCT CATGGCTTTT AAGGCTATTG TTGCATTTCT GTGCATTATT GTGTTAGCCG AAGGTCAGGG AACGAAGGTC
GGGTTTTATT CGTCCACTTG TCCGAGAGCT GAGTCTATTG TTAAATCGAC CGTTCAATCC CATTTCACAG CCGACCAAAC TATTGCAGCT GGGATTCTTA GGCTTTTCTT TCACGATTGC
TTCGTCCAGG GGTGCGATGC GTCCATACTC ATCACTGGTC CATCTGCAGA GAAAAACTCG CTTACAAATC TTGGATTGAG AGGATTTGAA GTTATTGAAG ACGCCAAGAC ACAGCTAGAA
GCTGCATGCC CAGGAATCGT TTCATGTGCT GACATTCTCG CTCTTGCAGC CCGCGATGCT GTAGTTGTGA GTAAGGGATT GAGCTGGTCT GTGCCAACGG GAAGGAGAGA TGGGTTGGTT
TCATCTTCCT CGGATGCAGC AAATCTGCCA ACTCCAGCAG ACTCCGTCAG CGTACAGAAG CAGAAGTTTG CTGATAAAGG CCTCAACGCC GAAGATCTTG TAACACTTGT TGGAGCACAT
ACGATTGGAC AAACGGATTG CCAGTTCTTC AGCTACCGCC TCTACAACTT CACAGCGGCG GGGAATGCGG ATCCGACAGT AAGTTCAGGA TATCTGAGTC AACTGCAATC TCTGTGTCCT
GCGGGAGGCG ATGGTTCGAA GCGCGTGGCT CTGGACAAGG GCAGCCAAAC GGCATTTGAC GCGAGTTTCT TCAAGAACGT GAGGGACGGA AACGCGGTGC TTGAATCGGA CCAGAGGCTG
TGGGGAGACG ACTCCACCAA AAGTGTTGTT CAAAAGTACG CGGGAAGCAT CAGAGGAGTG GTGGGTGTCC GATTTGACGT GGCATTCGGA AAGGCTATGG TGAAAATGAG CAACATCGGA
GTCAAGAGCG GAACACAGGG TGAAATTCGC AAAGTCTGCT CTTCGTTCAA TTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTGCATAGCC AAACATATGG CCCTGACACA TTGCATCACT TCTCATTGCG CATTATAAGT TGAGGGAGAT CTTGCGTTCT TTTGAAGTAA TTGCATGTTG TTTAGAATGA GAATGCAGCA
AAGCATGCAG CCTACAATTG CCCTCATGGC TTTTAAGGCT ATTGTTGCAT TTCTGTGCAT TATTGTGTTA GCCGAAGGTC AGGGAACGAA GGTCGGGTTT TATTCGTCCA CTTGTCCGAG
AGCTGAGTCT ATTGTTAAAT CGACCGTTCA ATCCCATTTC ACAGCCGACC AAACTATTGC AGCTGGGATT CTTAGGCTTT TCTTTCACGA TTGCTTCGTC CAGGGGTGCG ATGCGTCCAT
ACTCATCACT GGTCCATCTG CAGAGAAAAA CTCGCTTACA AATCTTGGAT TGAGAGGATT TGAAGTTATT GAAGACGCCA AGACACAGCT AGAAGCTGCA TGCCCAGGAA TCGTTTCATG
TGCTGACATT CTCGCTCTTG CAGCCCGCGA TGCTGTAGTT GTGAGTAAGG GATTGAGCTG GTCTGTGCCA ACGGGAAGGA GAGATGGGTT GGTTTCATCT TCCTCGGATG CAGCAAATCT
GCCAACTCCA GCAGACTCCG TCAGCGTACA GAAGCAGAAG TTTGCTGATA AAGGCCTCAA CGCCGAAGAT CTTGTAACAC TTGTTGGAGC ACATACGATT GGACAAACGG ATTGCCAGTT
CTTCAGCTAC CGCCTCTACA ACTTCACAGC GGCGGGGAAT GCGGATCCGA CAGTAAGTTC AGGATATCTG AGTCAACTGC AATCTCTGTG TCCTGCGGGA GGCGATGGTT CGAAGCGCGT
GGCTCTGGAC AAGGGCAGCC AAACGGCATT TGACGCGAGT TTCTTCAAGA ACGTGAGGGA CGGAAACGCG GTGCTTGAAT CGGACCAGAG GCTGTGGGGA GACGACTCCA CCAAAAGTGT
TGTTCAAAAG TACGCGGGAA GCATCAGAGG AGTGGTGGGT GTCCGATTTG ACGTGGCATT CGGAAAGGCT ATGGTGAAAA TGAGCAACAT CGGAGTCAAG AGCGGAACAC AGGGTGAAAT
TCGCAAAGTC TGCTCTTCGT TCAATTAATT TGAATGCCAA TACATTCAAA CAATCATAAT AGCGATCATG AAGAATTATG CACGTAAATG TTAAAAAAAA AATTATGATT TTATTTTGCT
CCTCGCATGT AATAAAGGAA AACAAAAATG TTTCACCATA CTCGGGTCAT ATTTCTTGAT ACAAAACACA AATTTATGCA AATTATCCAT GTTTGCGGAA TATGAATAAA ATGCAAACGC
TTGTCGGCTG AAAAAAAA
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Retrieve as FASTA
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