Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
521 (499) |
| PWM (Da): |
54326.03 (52069.8) |
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| PI (pH): |
4.65 (4.58) |
Peptide Signal: |
cut: 23 range:23-521 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLSITSPYTA AALLVLSPTV RAAFFYPTVQ ASLLEHILVD THGAHSSGFA DAITPCTNYV SGSQNFGRET AAQWLRVAFH DFVTARVAEG TGGVDASIGF ETLREENSGS AFNDSFSFFR
PYVSPKVSMA DIVALSVSMS VGNCGGPQIP VRGGRIDATE GGPFGVPAPE TDLPTTLQYF ANSGFNQVDS IALTACGHTM GSVHHGGFPT VVGPEAVSAT NTAGGIHFDS TVAVFDPLVV
TEYLNGTGQQ GGPLVTSFNE SSRSDLRLYE SDNNATMTKL AQQGDGFLDT CSNLFQRMVE TVPSNVVLSD VVSPMDIKPI NATLDIDAAG NLVFTGFIRV LSSSASVAPK SISLLTSQSK
PISLIPESTL GTNVFGVTTF FPFNIGITNQ NSFHSFTVLG PGPAKTFAVQ SSTFVIPSLS LSTSETTTLV NFTVAISSQS YQKRLFSRGS TPTVSVQAPV GQMGTLGPAI STFSNVAMSE
VGSKAGYTLW SGSVNIGTNS TGPMSVAVLD SKGDELDILF V
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI (extra sequence) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTTTCTA TAACCTCTCC GTACACAGCA GCTGCACTTC TAGTCCTATC ACCGACAGTT CGTGCAGCAT TCTTTTACCC CACAGTACAG GCTTCACTTC TCGAGCATAT CCTCGTTGAT
ACCCACGGCG CTCATTCTTC TGGGTTTGCA GATGCAATAA CGCCATGCAC AAATTATGTG TCTGGCAGTC AGAATTTTGG ACGAGAGACA GCCGCTCAAT GGCTGAGAGT GGCATTCCAT
GACTTCGTTA CAGCACGTGT TGCAGAGGGC ACAGGTGGTG TTGATGCAAG TATTGGGTTC GAGACCTTGA GAGAAGAGAA TTCTGGGAGT GCTTTCAATG ATTCTTTCAG CTTCTTTAGG
CCATATGTCA GTCCAAAGGT TAGCAGTAAG TAGTGTATTC CCAAACGTCC CTGTCGAATT CGAACTTTGG TTTCACAGAC CCACTATCAC AAGCAGTCTC TCAAATGCAG GAGAAGAATG
GCACGCTCAC AGCATGCATT CACTATTGTT TCTTTACAGC GCCCAGCATA GACCCTGCCT TTTCGCTTCA AAAGTCACTG TTGCTAATCA CAAGTTTAAT AGTGGCCGAT ATCGTCGCTC
TTTCTGTCAG TATGGTAAGG AAGCTGTCCC CCATGGCCAT CTTCTGTCCA TTTCTAACCA ATTCAGAGTG TGGGAAATTG CGGTGGCCCC CAAATTCCAG TTCGAGGAGG AAGAATAGAC
GCAACTGAAG GTGGACCATT TGGTGTGCCT GCTCCAGAAA CCGACCTACC TACTACTCTT CAATATTTTG CAAATTCTGG CTTCAACCAA GTTGACTCCA TCGCACTCAC TGCTTGTGGG
CATACAATGG GAAGTGTGCA TCATGTAAAT CCAGCCTCGT AATTGAGATT CCAGTTGTCC ATAATATCTG ACAACTTATT AGGGGGGCTT CCCAACTGTC GTAGGTCCTG AAGCAGTAAG
TGCCACCAAC ACGGCTGGTG GAATCCACTT CGACAGCACT GTCGCTGTAT TTGATCCTCT CGTGGTCACA GAGTATCTGA ACGGTACAGG CCAGCAAGGA GGGCCACTCG TAACATCGTT
CAACGAATCA TCCCGGAGTG ATCTTCGACT CTACGAGAGT GACAACAATG CAACCATGAC CAAGCTCGCA CAGCAAGGCG ACGGCTTCTT GGATACTTGC TCCAACCTTT TTCAGCGGAT
GGTCGAGACG GTACCTAGCA ATGTTGTCCT ATCAGATGTC GTTTCGCCAA TGGACATTAA GCCGATCAAC GCAACTCTCG ACATCGACGC TGCTGGAAAT TTGGTCTTCA CTGGATTCAT
TCGAGTATGT CGTTTCTACC ATTCGACATT CTTTATGCTA ATGAACCAGG TTCTATCGTC CTCAGCTTCG GTTGCTCCAA AGTCTATCTC GCTCCTCACT TCTCAATCCA AGCCCATATC
TTTAATACCA GAATCGACTC TTGGTACCAA TGTCTTCGGC GTTACTACAT TTTTCCCATT CAATATCGGC ATTACAAACC AGAATTCCTT CCATTCCTTC ACTGTCCTAG GCCCTGGACC
AGCAAAGACA TTCGCTGTTC AATCTTCTAC CTTCGTAATC CCATCTCTCT CATTAAGCAC ATCTGAAACG ACAACACTAG TAAATTTTAC CGTTGCCATA TCGTCTCAAT CATACCAGAA
GCGACTTTTT TCTCGTGGGA GTACACCAAC AGTGAGTGTT CAAGCTCCCG TAGGACAGAT GGGCACTCTT GGCCCTGCGA TCTCCACATT TTCGAATGTC GCAATGTCGG AAGTTGGATC
CAAGGCAGGG TATACATTAT GGTCTGGATC AGTAAATATT GGCACCAATT CCACAGGTCC AATGAGTGTC GCTGTGTTGG ATAGCAAAGG GGACGAGCTT GACATCCTGT TTGTCTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTTTCTA TAACCTCTCC GTACACAGCA GCTGCACTTC TAGTCCTATC ACCGACAGTT CGTGCAGCAT TCTTTTACCC CACAGTACAG GCTTCACTTC TCGAGCATAT CCTCGTTGAT
ACCCACGGCG CTCATTCTTC TGGGTTTGCA GATGCAATAA CGCCATGCAC AAATTATGTG TCTGGCAGTC AGAATTTTGG ACGAGAGACA GCCGCTCAAT GGCTGAGAGT GGCATTCCAT
GACTTCGTTA CAGCACGTGT TGCAGAGGGC ACAGGTGGTG TTGATGCAAG TATTGGGTTC GAGACCTTGA GAGAAGAGAA TTCTGGGAGT GCTTTCAATG ATTCTTTCAG CTTCTTTAGG
CCATATGTCA GTCCAAAGGT TAGCATGGCC GATATCGTCG CTCTTTCTGT CAGTATGAGT GTGGGAAATT GCGGTGGCCC CCAAATTCCA GTTCGAGGAG GAAGAATAGA CGCAACTGAA
GGTGGACCAT TTGGTGTGCC TGCTCCAGAA ACCGACCTAC CTACTACTCT TCAATATTTT GCAAATTCTG GCTTCAACCA AGTTGACTCC ATCGCACTCA CTGCTTGTGG GCATACAATG
GGAAGTGTGC ATCATGGGGG CTTCCCAACT GTCGTAGGTC CTGAAGCAGT AAGTGCCACC AACACGGCTG GTGGAATCCA CTTCGACAGC ACTGTCGCTG TATTTGATCC TCTCGTGGTC
ACAGAGTATC TGAACGGTAC AGGCCAGCAA GGAGGGCCAC TCGTAACATC GTTCAACGAA TCATCCCGGA GTGATCTTCG ACTCTACGAG AGTGACAACA ATGCAACCAT GACCAAGCTC
GCACAGCAAG GCGACGGCTT CTTGGATACT TGCTCCAACC TTTTTCAGCG GATGGTCGAG ACGGTACCTA GCAATGTTGT CCTATCAGAT GTCGTTTCGC CAATGGACAT TAAGCCGATC
AACGCAACTC TCGACATCGA CGCTGCTGGA AATTTGGTCT TCACTGGATT CATTCGAGTT CTATCGTCCT CAGCTTCGGT TGCTCCAAAG TCTATCTCGC TCCTCACTTC TCAATCCAAG
CCCATATCTT TAATACCAGA ATCGACTCTT GGTACCAATG TCTTCGGCGT TACTACATTT TTCCCATTCA ATATCGGCAT TACAAACCAG AATTCCTTCC ATTCCTTCAC TGTCCTAGGC
CCTGGACCAG CAAAGACATT CGCTGTTCAA TCTTCTACCT TCGTAATCCC ATCTCTCTCA TTAAGCACAT CTGAAACGAC AACACTAGTA AATTTTACCG TTGCCATATC GTCTCAATCA
TACCAGAAGC GACTTTTTTC TCGTGGGAGT ACACCAACAG TGAGTGTTCA AGCTCCCGTA GGACAGATGG GCACTCTTGG CCCTGCGATC TCCACATTTT CGAATGTCGC AATGTCGGAA
GTTGGATCCA AGGCAGGGTA TACATTATGG TCTGGATCAG TAAATATTGG CACCAATTCC ACAGGTCCAA TGAGTGTCGC TGTGTTGGAT AGCAAAGGGG ACGAGCTTGA CATCCTGTTT
GTCTGA
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Retrieve as FASTA
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