Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
224 |
PWM (Da): |
25381.22 |
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PI (pH):
| 10.02 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRLPPRYYIR ALLSKLRLTT RARSFIPAST SRPYLRTTPH PHRTLFTAST KNMASATSFY DFKPLDKKGQ ATDLADYKGK VVLIVNTASK CGFTPQYEGL EKLYKKLKET HGDDFQILGF
PCNQFGSQEP GTDDDIQSFC LVNYGVSFPI MGKTDVNGDN ANPLFEWLKE EKPGLLGMKR VKWNFEKWLV GRDGKVKGRW ASVTKPEALE KPILDELAKP KSEL*
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (2 introns). Incorrect prediction from JGI (PS is missing). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCGCCTCC CGCCACGCTA TTACATTCGA GCACTACTTT CTAAATTGAG ACTCACGACT CGTGCAAGAA GCTTTATACC TGCTTCTACT TCCAGACCAT ACCTTCGAAC TACACCACAC
CCACACAGGA CATTGTTTAC AGCAAGCACG AAAAATATGG CATCAGCAAC CAGCTTCTAC GACTTCAAGC CTCTCGACAG TACGTCCCTC CGCATCCATT CCTCTTTCCA AATTCCCAAT
TGAAACGAAT ACCCCTCCAT TCATCATACA ATAGATAGCT AACCCCACCT TTAATCAACA GAGAAAGGCC AGGCCACCGA CCTCGCGGAC TACAAAGGAA AAGTAGTCTT GATTGTCAAC
ACGGCCAGTA AATGCGGATT CACACCACAA TACGAGGGTT TGGAGAAGCT GTATAAGAAG TTGAAGGAGA CGCACGGGTT TGTCTCCCCT TTAATCACTC CACTGCCAAT GACATCTGGC
ATTGGCACAG CATCCCAATC CAACCTACAA CATAATTCCC TCCCCACCTG CCCTCCCCTA ATCTATACTC CCACTAACAG ACCCCCTCCT CCTCCAGCGA CGATTTCCAA ATCCTCGGCT
TCCCCTGCAA TCAATTCGGC TCCCAAGAAC CCGGCACCGA CGACGACATC CAATCCTTCT GCCTTGTAAA CTACGGCGTC TCCTTCCCCA TAATGGGCAA AACCGACGTG AACGGCGATA
ATGCCAATCC CCTTTTCGAA TGGTTGAAAG AGGAAAAGCC AGGATTGCTG GGCATGAAGA GGGTTAAGTG GAATTTTGAG AAGTGGTTGG TGGGGAGGGA TGGGAAGGTT AAGGGGAGGT
GGGCGAGTGT TACGAAGCCG GAGGCGTTGG AGAAGCCGAT TTTGGATGAG CTTGCTAAGC CGAAGAGTGA GTTGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCGCCTCC CGCCACGCTA TTACATTCGA GCACTACTTT CTAAATTGAG ACTCACGACT CGTGCAAGAA GCTTTATACC TGCTTCTACT TCCAGACCAT ACCTTCGAAC TACACCACAC
CCACACAGGA CATTGTTTAC AGCAAGCACG AAAAATATGG CATCAGCAAC CAGCTTCTAC GACTTCAAGC CTCTCGACAA GAAAGGCCAG GCCACCGACC TCGCGGACTA CAAAGGAAAA
GTAGTCTTGA TTGTCAACAC GGCCAGTAAA TGCGGATTCA CACCACAATA CGAGGGTTTG GAGAAGCTGT ATAAGAAGTT GAAGGAGACG CACGGCGACG ATTTCCAAAT CCTCGGCTTC
CCCTGCAATC AATTCGGCTC CCAAGAACCC GGCACCGACG ACGACATCCA ATCCTTCTGC CTTGTAAACT ACGGCGTCTC CTTCCCCATA ATGGGCAAAA CCGACGTGAA CGGCGATAAT
GCCAATCCCC TTTTCGAATG GTTGAAAGAG GAAAAGCCAG GATTGCTGGG CATGAAGAGG GTTAAGTGGA ATTTTGAGAA GTGGTTGGTG GGGAGGGATG GGAAGGTTAA GGGGAGGTGG
GCGAGTGTTA CGAAGCCGGA GGCGTTGGAG AAGCCGATTT TGGATGAGCT TGCTAAGCCG AAGAGTGAGT TGTAG
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Retrieve as FASTA
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