Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
188 (179) |
PWM (Da): |
21108.93 (20320.2) |
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PI (pH):
| 9.08 (5.60) |
Peptide Signal:
| cut: 36 range:36-214 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLLYSRVQLL RPFLIPPQVL HHRLSFSTVM SGFYSLKAEK PGGNIFDFAE LEGKTVLIVN TATACGFTPQ YTGLQALYNK YKDRNFVILG FPSNQFGGQE PRDDAGIAEF CELNHGVTFP
LMKKSEVNGD NTNEVFRWLK SQKAGILGLT RIKWNFEKFL VNKDGQVVQR WASTSTPDAI EGEVAKVL*
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns). Incorrect prediction from JGI (PS is missing). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTATTAT ATTCCCGGGT TCAATTGCTC AGACCATTTC TTATTCCTCC ACAGGTATTA CACCACCGTT TATCATTTTC GACAGTCATG TCCGGTTTTT ATTCCCTCAA AGCAGAGAAG
CCAGGTGGAA ACATATTTGA TTTCGCCGAA CTAGAAGGAA AGACAGTTTT GATCGTCAAT ACCGCCACTG CATGGTAGCT TCTTGCCGCT AACTCGTTGA TCGCATCGTC GTTAACTACT
TGGCAATGTT ATAGTGGTTT CACACCCCAG TACACCGGTC TGCCTGTTCA GATATCTTCG GTATCATCTT GAACTCATCC TTTTGCTCAG GTCTTCAAGC CCTGTACAAT AAATACAAAG
ATAGGAATTT CGTCATACTC GGGTTTCCTT CTAACCAGGT AATTGAAGGA CTCCCTATAG AAGAAGATGT ATTCTGACTC CACTTCCCTT TCCCAGTTCG GCGGTCAAGA GCCTAGAGAT
GATGCAGGAA TCGCTGAATT TTGTGAATTG AATCATGGAG TCACATTTCC CTTGATGAAG AAGTCCGAGG TCAACGGTGA TAACACCAAC GAAGTCTTCC GATGGCTGAA GAGTCAGAAG
GCGGGTATTT TGGGACTGAC AAGGATCAAG GCTCGTGCAA TTTTATGATT ATCATCCATT GCTGACGAGA GTCGTATAGT GGAACTTTGA GAAATTCCTA GTCAACAAAG ATGGGCAGGT
AGTACAGCGA TGGGCATCTA CGTCAACCCC CGATGCTATC GAGGGTGAGG TCGCAAAGGT CTTATGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTATTAT ATTCCCGGGT TCAATTGCTC AGACCATTTC TTATTCCTCC ACAGGTATTA CACCACCGTT TATCATTTTC GACAGTCATG TCCGGTTTTT ATTCCCTCAA AGCAGAGAAG
CCAGGTGGAA ACATATTTGA TTTCGCCGAA CTAGAAGGAA AGACAGTTTT GATCGTCAAT ACCGCCACTG CATGTGGTTT CACACCCCAG TACACCGGTC TTCAAGCCCT GTACAATAAA
TACAAAGATA GGAATTTCGT CATACTCGGG TTTCCTTCTA ACCAGTTCGG CGGTCAAGAG CCTAGAGATG ATGCAGGAAT CGCTGAATTT TGTGAATTGA ATCATGGAGT CACATTTCCC
TTGATGAAGA AGTCCGAGGT CAACGGTGAT AACACCAACG AAGTCTTCCG ATGGCTGAAG AGTCAGAAGG CGGGTATTTT GGGACTGACA AGGATCAAGT GGAACTTTGA GAAATTCCTA
GTCAACAAAG ATGGGCAGGT AGTACAGCGA TGGGCATCTA CGTCAACCCC CGATGCTATC GAGGGTGAGG TCGCAAAGGT CTTATGA
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Retrieve as FASTA
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