Entry information : PmicGPx01
Entry ID 13123
Creation 2015-04-09 (Christophe Dunand)
Last sequence changes 2015-04-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-04-09 (Christophe Dunand)
Peroxidase information: PmicGPx01
Name PmicGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Pisolithaceae Pisolithus
Organism Pisolithus microcarpus    [TaxId: 178872 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmicGPx01
start..stop
S start..stop
PtinGPx01 407 5e-147 1..229 1..225
XbadGPx01 298 1e-104 67..229 3..165
ScitGPx01 298 2e-104 64..229 3..168
BeduGPx01 300 3e-104 72..229 90..247
Literature and cross-references PmicGPx01
DNA ref. JGI genome:   scaffold_183 (49967..49056)
Cluster/Prediction ref. JGI gene:   113995
Protein sequence: PmicGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   230
PWM (Da):   %s   25795.42  
PI (pH):   %s   10.18
Sequence
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Send to Peroxiscan
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MIIRSVIYRP VIGRICRPVI LTNLSRSIIY QRSQRRTLHS VPTTTLSTKV RQHSYYLIVN RTMSSKSTAQ TFYDLKADLP GGNVYNFEQL KGKVVLVVNV ASQCGFTPQY KGLQALYDKY 
KDRGFVILGF PCNQFGGQEP GDDGSIASFC ELNHGVSFPL MKKSDVNGNQ TNAVYNWLKN EKAGVLGLTR IKWNFEKFLV DKNGNVVNRW ASTTTPEAIS PYVEKLLSE* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns) Incorrect prediction from JGI (PS is missing).
DNA
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ATGATCATCC GCTCCGTTAT CTACCGACCC GTCATTGGTC GCATCTGCAG ACCTGTTATC TTGACAAACT TGTCCCGCAG CATCATATAT CAAAGGTCAC AGCGTCGTAC ACTGCACTCA  GTTCCCACCA CCACCTTGTC AACGAAGGTT CGCCAACACA GCTACTACCT CATCGTAAAC CGTACCATGT CCTCCAAATC GACCGCACAG ACCTTCTATG ACCTCAAAGC CGACCTCCCA  GGTGGAAATG TGTACAACTT TGAGCAGTTG AAAGGGAAAG TCGTGCTCGT CGTGAACGTT GCTTCTCAGT GGTGAGCGTT TCTGGAGTTG CGAGTTGCTT AGGCTTCGGC TGATATCCTG  ACTACACCAG TGGATTCACC CCGCAGTACA AGGGTGTGTA CAAATTACCT AGGGTTCACT AGTCGCTGAG GTTAGCTGCA GGTCTACAGG CTCTGTATGA CAAGTACAAG GATCGGGGAT  TTGTTATCCT CGGATTCCCC TGCAACCAGG TCAGTCAAGA AATGTCTGGT CTTCTCGTGG GCACGCGGTT CACGTTCACC CTTTAGTTTG GTGGCCAAGA ACCTGGAGAC GATGGTTCCA  TTGCATCTTT TTGCGAGCTA AATCACGGCG TCTCTTTCCC TCTCATGAAG AAATCAGACG TGAACGGCAA TCAAACCAAC GCCGTCTATA ACTGGCTCAA GAATGAGAAG GCTGGTGTTC  TTGGACTGAC ACGTATCAAG GTACCGTGGT CGATTCATGA CCCTTGTTTA TCGAAGTGGA TGATAACCGT GCCTTCAGTG GAATTTTGAG AAGTTCCTGG TCGACAAGAA TGGTAATGTT 
GTGAACCGAT GGGCTTCGAC GACAACGCCT GAAGCCATTA GTCCCTACGT GGAGAAGCTT CTTTCGGAAT GA 

Retrieve as FASTA  
CDS
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ATGATCATCC GCTCCGTTAT CTACCGACCC GTCATTGGTC GCATCTGCAG ACCTGTTATC TTGACAAACT TGTCCCGCAG CATCATATAT CAAAGGTCAC AGCGTCGTAC ACTGCACTCA  GTTCCCACCA CCACCTTGTC AACGAAGGTT CGCCAACACA GCTACTACCT CATCGTAAAC CGTACCATGT CCTCCAAATC GACCGCACAG ACCTTCTATG ACCTCAAAGC CGACCTCCCA  GGTGGAAATG TGTACAACTT TGAGCAGTTG AAAGGGAAAG TCGTGCTCGT CGTGAACGTT GCTTCTCAGT GTGGATTCAC CCCGCAGTAC AAGGGTCTAC AGGCTCTGTA TGACAAGTAC  AAGGATCGGG GATTTGTTAT CCTCGGATTC CCCTGCAACC AGTTTGGTGG CCAAGAACCT GGAGACGATG GTTCCATTGC ATCTTTTTGC GAGCTAAATC ACGGCGTCTC TTTCCCTCTC  ATGAAGAAAT CAGACGTGAA CGGCAATCAA ACCAACGCCG TCTATAACTG GCTCAAGAAT GAGAAGGCTG GTGTTCTTGG ACTGACACGT ATCAAGTGGA ATTTTGAGAA GTTCCTGGTC 
GACAAGAATG GTAATGTTGT GAACCGATGG GCTTCGACGA CAACGCCTGA AGCCATTAGT CCCTACGTGG AGAAGCTTCT TTCGGAATGA 

Retrieve as FASTA