Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
331 |
| PWM (Da): |
35179.36 |
Transmb domain: |
i12-34o |
| PI (pH):
| 7.22 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MQFKMARKDG VLSVYNALSI VNLLVMVVCT EAQGKTRVGF YSSTCPSVES VVQSSVQFFL NSDSTLAPAL LRMHFHDCFV QGCDASVLLE GSSTEKTAAP NQGLRGFEVI ADAKARLEAV
CPGVVSCADI LAIAARDAVV MSNGPSWEVP LGRMDGTRSS ASDVTNFPSP GDTVNTLKQK FAARGLTAQD LVALSGAHTI GQSDCKFFSY RLYNYKASGM SDPTINPNSL RQLQIICPQN
GNGNTRVALD KGSKNSWDTN YFQNVIAGNA VLESDQGLAS DASTQSLVNT FANSINSFDS AFTQSMVKLS NIGVKTPSQG EIRRMCGVSN F
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (incorrect prediction from SymDB, Ginbil_Gb_06667; tiny splicing error intron 1Ginbil_2032861_SGTW: part of last exon) and RNAseq (gba_locus_13978_iso_1_len_1322_ver_2). no EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGTTCA AAATGGCTAG AAAAGATGGA GTTCTTAGTG TTTATAATGC GTTGAGCATT GTGAATTTGC TAGTGATGGT AGTGTGCACC GAGGCACAAG GAAAAACCAG AGTGGGATTC
TATTCTTCAA CATGTCCCAG CGTAGAATCT GTAGTTCAAT CAAGCGTTCA GTTCTTCCTC AACTCCGATA GCACACTTGC TCCCGCTCTT CTACGCATGC ACTTTCACGA CTGCTTTGTC
CAGGGTTGCG ATGCATCTGT ATTGCTGGAG GGTTCTTCAA CAGAGAAAAC TGCTGCTCCA AACCAAGGGC TACGTGGTTT TGAGGTGATA GCAGATGCAA AAGCTAGATT GGAAGCAGTC
TGCCCAGGAG TTGTGTCGTG TGCAGATATT CTTGCTATTG CTGCTCGTGA TGCTGTTGTT ATGAGCAATG GACCTTCGTG GGAAGTGCCT TTAGGAAGAA TGGATGGGAC GAGATCCTCA
GCTTCTGATG TCACCAACTT TCCCTCCCCA GGAGACACTG TCAATACTCT TAAACAAAAG TTCGCGGCCA GGGGTCTCAC AGCCCAAGAT CTCGTTGCTC TGTCTGGTGC TCACACAATT
GGGCAAAGTG ACTGCAAATT CTTCAGCTAT CGGTTATACA ACTACAAGGC CAGCGGCATG TCGGATCCAA CCATAAATCC CAACTCGCTC AGGCAGCTTC AGATCATTTG CCCTCAGAAT
GGGAACGGAA ACACTAGAGT TGCTCTTGAC AAAGGGAGCA AGAATAGTTG GGACACCAAT TACTTCCAGA ACGTTATTGC AGGAAATGCA GTGCTGGAGT CCGATCAAGG CCTCGCTTCA
GATGCTTCCA CTCAGTCTCT GGTAAACACA TTTGCCAACT CAATCAATTC CTTCGACTCC GCATTCACAC AATCCATGGT GAAGCTCAGC AATATTGGTG TCAAAACCCC ATCACAAGGT
GAGATCAGAA GAATGTGTGG AGTCTCCAAC TTCTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCATAGCAT TTCTGTTTGA TGGGCTGCCC TCCAATTTTC AGTATTTTAA TGCATCCGAG TGAGACGTAA TGCAGTTCAA AATGGCTAGA AAAGATGGAG TTCTTAGTGT TTATAATGCG
TTGAGCATTG TGAATTTGCT AGTGATGGTA GTGTGCACCG AGGCACAAGG AAAAACCAGA GTGGGATTCT ATTCTTCAAC ATGTCCCAGC GTAGAATCTG TAGTTCAATC AAGCGTTCAG
TTCTTCCTCA ACTCCGATAG CACACTTGCT CCCGCTCTTC TACGCATGCA CTTTCACGAC TGCTTTGTCC AGGGTTGCGA TGCATCTGTA TTGCTGGAGG GTTCTTCAAC AGAGAAAACT
GCTGCTCCAA ACCAAGGGCT ACGTGGTTTT GAGGTGATAG CAGATGCAAA AGCTAGATTG GAAGCAGTCT GCCCAGGAGT TGTGTCGTGT GCAGATATTC TTGCTATTGC TGCTCGTGAT
GCTGTTGTTA TGAGCAATGG ACCTTCGTGG GAAGTGCCTT TAGGAAGAAT GGATGGGACG AGATCCTCAG CTTCTGATGT CACCAACTTT CCCTCCCCAG GAGACACTGT CAATACTCTT
AAACAAAAGT TCGCGGCCAG GGGTCTCACA GCCCAAGATC TCGTTGCTCT GTCTGGTGCT CACACAATTG GGCAAAGTGA CTGCAAATTC TTCAGCTATC GGTTATACAA CTACAAGGCC
AGCGGCATGT CGGATCCAAC CATAAATCCC AACTCGCTCA GGCAGCTTCA GATCATTTGC CCTCAGAATG GGAACGGAAA CACTAGAGTT GCTCTTGACA AAGGGAGCAA GAATAGTTGG
GACACCAATT ACTTCCAGAA CGTTATTGCA GGAAATGCAG TGCTGGAGTC CGATCAAGGC CTCGCTTCAG ATGCTTCCAC TCAGTCTCTG GTAAACACAT TTGCCAACTC AATCAATTCC
TTCGACTCCG CATTCACACA ATCCATGGTG AAGCTCAGCA ATATTGGTGT CAAAACCCCA TCACAAGGTG AGATCAGAAG AATGTGTGGA GTCTCCAACT TCTGACTTCA CATGAGAAGA
ATCACTCTTA GTGCTGAAAA CAAATGTCAT TCGCTGCATA ATTACCAGTT CTGATATTTG TAATGTCGAA TAAAAGTTAA GTCGCAGTGA TTAAAATTGA GGTAATTATT GCATATTTAT
GCATATTCAT TTCGTCTTTT TACTTCTAAA CGTCTTTTTT TATATGTAGC ACCTATTCCA ACTCAATCAA TTCTTATTGT CTCCCCAAGT ATTTAATTAA TAATAAGTTA GATGTACTTT
TG
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Retrieve as FASTA
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