Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
327 (303) |
| PWM (Da): |
35644.38 (33063.2) |
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| PI (pH):
| 4.66 (4.57) |
Peptide Signal:
| cut: 25 range:25-327 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKMKMNLMMG VMMVGVIGWG VADAQLSVDY YQWTCPQAEN IIREEMARKQ AANPTSAAGT LRIYFHDCFV EGCDASVLIS STPSNRAERE AEINLSLPGD GFDAIARAKS AVEAECPGIV
SCADVLSIAT RDLLTLIGGP YYEVMKGRKD GLISEAWRVE GNLPDVAMSV DELNALFASK GFNQTEMTTL SGAHTVGFAH CKEFMTRIYD YNDTHAIDPT MNPYYAMGLQ KACPQLNLDT
TIAAFNDVIS PRNFDNVFYQ NLAKGLGLLA SDQILYADTR TRALVETYAS DQDAFFQAFA AAMVKLGSLG VKTGNQGEVR RRCDAFN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (uncorrect prediction from SymDB; only last exon and only first exon) and RNA seq (gba_locus_6875_iso_2_len_1303_ver_2). No EST found. http://medicinalplantgenomics.msu.edu |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGATGA AGATGAATTT GATGATGGGC GTGATGATGG TTGGGGTCAT CGGATGGGGA GTTGCAGATG CACAGCTGTC AGTGGATTAT TACCAGTGGA CATGCCCGCA AGCGGAGAAT
ATCATAAGAG AAGAGATGGC GAGGAAGCAG GCTGCCAATC CCACAAGTGC AGCAGGAACG TTGCGCATTT ACTTTCACGA CTGCTTCGTA GAGGGATGCG ATGCCTCTGT GCTGATTTCG
TCCACTCCGA GCAACAGGGC GGAGAGGGAA GCAGAAATAA ACCTGTCATT GCCAGGCGAC GGGTTCGATG CGATTGCCCG AGCCAAAAGT GCGGTTGAAG CAGAATGCCC GGGCATTGTA
TCGTGTGCGG ATGTGCTGTC GATTGCAACC AGAGATCTGC TAACTCTGAT CGGGGGGCCT TACTACGAGG TAATGAAGGG AAGAAAAGAT GGGCTGATCT CGGAGGCATG GAGAGTGGAA
GGGAACCTGC CGGATGTAGC AATGAGTGTG GATGAACTAA ATGCTCTGTT CGCCTCCAAA GGCTTCAACC AGACGGAAAT GACAACCCTT TCCGGGGCTC ACACCGTGGG TTTTGCCCAT
TGCAAAGAGT TCATGACGCG GATCTACGAC TACAACGACA CGCATGCCAT CGATCCCACC ATGAATCCTT ACTATGCCAT GGGCCTGCAG AAGGCCTGCC CCCAACTCAA TCTCGACACC
ACCATTGCCG CCTTCAATGA TGTCATTTCT CCCAGAAATT TCGACAATGT CTTCTATCAG AACCTGGCCA AGGGTCTTGG CTTGCTTGCC TCTGATCAGA TTCTGTATGC CGACACTCGG
ACTAGGGCTC TTGTGGAGAC TTATGCCTCG GACCAGGATG CATTTTTCCA AGCATTTGCG GCTGCCATGG TTAAACTGGG TAGTTTGGGT GTCAAAACTG GTAACCAGGG AGAGGTCAGA
CGGAGGTGCG ATGCTTTCAA TTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAAGGTCCAA GGGTTCTACA ATCGCAGAAA GAGTTTGGCT TGGAATAATG AAGATGAAGA TGAATTTGAT GATGGGCGTG ATGATGGTTG GGGTCATCGG ATGGGGAGTT GCAGATGCAC
AGCTGTCAGT GGATTATTAC CAGTGGACAT GCCCGCAAGC GGAGAATATC ATAAGAGAAG AGATGGCGAG GAAGCAGGCT GCCAATCCCA CAAGTGCAGC AGGAACGTTG CGCATTTACT
TTCACGACTG CTTCGTAGAG GGATGCGATG CCTCTGTGCT GATTTCGTCC ACTCCGAGCA ACAGGGCGGA GAGGGAAGCA GAAATAAACC TGTCATTGCC AGGCGACGGG TTCGATGCGA
TTGCCCGAGC CAAAAGTGCG GTTGAAGCAG AATGCCCGGG CATTGTATCG TGTGCGGATG TGCTGTCGAT TGCAACCAGA GATCTGCTAA CTCTGATCGG GGGGCCTTAC TACGAGGTAA
TGAAGGGAAG AAAAGATGGG CTGATCTCGG AGGCATGGAG AGTGGAAGGG AACCTGCCGG ATGTAGCAAT GAGTGTGGAT GAACTAAATG CTCTGTTCGC CTCCAAAGGC TTCAACCAGA
CGGAAATGAC AACCCTTTCC GGGGCTCACA CCGTGGGTTT TGCCCATTGC AAAGAGTTCA TGACGCGGAT CTACGACTAC AACGACACGC ATGCCATCGA TCCCACCATG AATCCTTACT
ATGCCATGGG CCTGCAGAAG GCCTGCCCCC AACTCAATCT CGACACCACC ATTGCCGCCT TCAATGATGT CATTTCTCCC AGAAATTTCG ACAATGTCTT CTATCAGAAC CTGGCCAAGG
GTCTTGGCTT GCTTGCCTCT GATCAGATTC TGTATGCCGA CACTCGGACT AGGGCTCTTG TGGAGACTTA TGCCTCGGAC CAGGATGCAT TTTTCCAAGC ATTTGCGGCT GCCATGGTTA
AACTGGGTAG TTTGGGTGTC AAAACTGGTA ACCAGGGAGA GGTCAGACGG AGGTGCGATG CTTTCAATTG ACATTCTCAC ATTCGATTCT TCCTCAAATT CGATTCTTCG TCAAGCTTTG
TCTATGGGCA TTGACTCATG GCAGGGCCTG GTCATTTGTA CATGATTCAA GTCAAATTCC ATTGTTCTCT GCGGTGGCTC GAACTTTGTA CGTTAGGCCT GGTTAGAGCA TTTCAGACAA
GGTGATTCAA ATATATTACG AGTAATTTTG TGGAGTGTAA TCTTATTTGG GCTGTTGATT TTACTGATAA TAATAATCAT GAACTGAGTT GCCTATCGAA AAA
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Retrieve as FASTA
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