Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
338 |
| PWM (Da): |
36043.18 |
Transmb domain: |
i7-29o |
| PI (pH):
| 7.31 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAYSKNAAAV NGVVELIIIA LVMISGGSAG DYNGLTPNFY DKSCPEVLSI VRSVVEKAVA KEARMAASLL RLHFHDCFVQ GCDGSLLLDD TPTFRGEKTA VPNNNSVRGF DVIDEIKREV
ESACPGVVSC ADIIAIAARD SVVLSGGPEW SVAVGRRDSR GASLSGANRN IPAPNNTLSA LITKFKRQGL DQVDLVALSG GHTIGQSRCT SFRQRLYNQT GKGEANLTIQ SNYLGELKSA
CPISGGDNNL SPLDVVSPTQ FNNHYFLNLK SGRGLLNSDV QLLYAGSNDQ FITGLVDAYA ADQTLFFNQF ADSMVKMGSI KPLTGSMGEI RTNCRRMN
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (no prediction from SymDB, scaffold33242 short PS is missing due to scaffold border, 7 mismatches) and RNA seq (gba_locus_35301_iso_1_len_1278_ver_2). No EST found. |
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTATA GCAAAAATGC AGCAGCAGTG AATGGTGTAG TAGAGCTGAT TATTATTGCA CTTGTAATGA TATCGGGGGG GAGTGCGGGC GATTATAATG GGTTGACGCC CAACTTTTAT
GACAAATCTT GTCCGGAGGT TCTGTCAATA GTGAGGTCGG TGGTAGAAAA GGCAGTTGCC AAGGAGGCTC GAATGGCGGC ATCCTTACTT CGTCTTCATT TCCACGATTG TTTTGTCCAG
GGCTGCGACG GTTCCTTGTT GTTAGACGAC ACCCCGACAT TTAGAGGAGA GAAAACAGCA GTCCCCAATA ACAACTCTGT GAGAGGATTT GACGTGATCG ACGAAATCAA AAGGGAGGTG
GAGAGTGCGT GCCCGGGAGT TGTGTCTTGC GCCGATATCA TCGCCATTGC AGCTCGAGAT TCGGTCGTCC TGAGTGGAGG ACCAGAGTGG AGTGTAGCCG TGGGAAGAAG GGACTCGAGG
GGCGCCAGCT TAAGCGGGGC GAATCGGAAC ATTCCAGCCC CCAACAACAC CCTCAGCGCT CTCATCACAA AGTTCAAACG ACAAGGCCTC GACCAGGTCG ACTTGGTTGC ACTTTCAGGT
GGCCACACCA TCGGGCAGAG TCGATGCACA AGCTTCAGGC AGCGCCTCTA CAACCAGACT GGAAAGGGAG AAGCCAATCT GACCATCCAG AGCAATTATT TGGGCGAACT GAAGAGCGCA
TGCCCGATAT CAGGTGGAGA CAACAACTTG TCCCCTTTGG ATGTTGTTAG CCCCACCCAG TTTAACAACC ACTATTTCCT CAACCTTAAG AGCGGGCGAG GACTGCTGAA TTCCGACGTC
CAGCTGCTCT ACGCCGGATC AAATGATCAA TTCATCACGG GGCTTGTCGA TGCATATGCT GCTGACCAGA CCTTGTTCTT CAACCAATTT GCAGACTCCA TGGTTAAGAT GGGCAGCATT
AAACCTCTCA CCGGATCCAT GGGAGAAATC AGAACCAATT GTCGTCGAAT GAATTGA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTGTAAGGTG TGTTTTGCAT CGATATATAG ATAGCTAGAT GACGACGACT TTGCAATCAA ATCCAAGTGT GCTAATTTGA GAGAGGAGGA ATATATATAG AATTAAGCTG TAGAATTCCA
GTGTTGCAGC GGCTGGTTAT CACTAAAATG GCTTATAGCA AAAATGCAGC AGCAGTGAAT GGTGTAGTAG AGCTGATTAT TATTGCACTT GTAATGATAT CGGGGGGGAG TGCGGGCGAT
TATAATGGGT TGACGCCCAA CTTTTATGAC AAATCTTGTC CGGAGGTTCT GTCAATAGTG AGGTCGGTGG TAGAAAAGGC AGTTGCCAAG GAGGCTCGAA TGGCGGCATC CTTACTTCGT
CTTCATTTCC ACGATTGTTT TGTCCAGGGC TGCGACGGTT CCTTGTTGTT AGACGACACC CCGACATTTA GAGGAGAGAA AACAGCAGTC CCCAATAACA ACTCTGTGAG AGGATTTGAC
GTGATCGACG AAATCAAAAG GGAGGTGGAG AGTGCGTGCC CGGGAGTTGT GTCTTGCGCC GATATCATCG CCATTGCAGC TCGAGATTCG GTCGTCCTGA GTGGAGGACC AGAGTGGAGT
GTAGCCGTGG GAAGAAGGGA CTCGAGGGGC GCCAGCTTAA GCGGGGCGAA TCGGAACATT CCAGCCCCCA ACAACACCCT CAGCGCTCTC ATCACAAAGT TCAAACGACA AGGCCTCGAC
CAGGTCGACT TGGTTGCACT TTCAGGTGGC CACACCATCG GGCAGAGTCG ATGCACAAGC TTCAGGCAGC GCCTCTACAA CCAGACTGGA AAGGGAGAAG CCAATCTGAC CATCCAGAGC
AATTATTTGG GCGAACTGAA GAGCGCATGC CCGATATCAG GTGGAGACAA CAACTTGTCC CCTTTGGATG TTGTTAGCCC CACCCAGTTT AACAACCACT ATTTCCTCAA CCTTAAGAGC
GGGCGAGGAC TGCTGAATTC CGACGTCCAG CTGCTCTACG CCGGATCAAA TGATCAATTC ATCACGGGGC TTGTCGATGC ATATGCTGCT GACCAGACCT TGTTCTTCAA CCAATTTGCA
GACTCCATGG TTAAGATGGG CAGCATTAAA CCTCTCACCG GATCCATGGG AGAAATCAGA ACCAATTGTC GTCGAATGAA TTGACCACAC GATTTCCTCC CTTGTAGACA TATTTCGGAC
TAGTCCGATG AGAATCATAT ATAACTTCTC TGCAATTCCA AACGACATAA TATTTATCAA TTTTAATTAA ACTTAAAA
|
Retrieve as FASTA
|
|