Entry information : GbPrx43
Entry ID 13135
Creation 2015-04-14 (Christophe Dunand)
Last sequence changes 2015-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-08 (Christophe Dunand)
Peroxidase information: GbPrx43
Name GbPrx43
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx43
start..stop
S start..stop
GbPrx58 603 0 1..323 5..330
GbPrx80 575 0 1..323 1..295
GbPrx27 527 0 1..323 11..337
PtaPrx57 508 0 6..323 11..331
Literature and cross-references GbPrx43
Protein sequence: GbPrx43
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (300)
PWM (Da):   %s   34462.14 (31967.8)  
PI (pH):   %s   4.97 (4.96) Peptide Signal:   %s   cut: 24 range:24-323
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MESTNALMTF KLIVVFMAIV ALADPQGTRV GFYYSTCPRA ESIVQSTVRS HYNSDPTVAP GLLRLFFHDC FIEGCDGSIL ITGPSAEKNA LTNLGLRGFE VIEDAKTQVE AACPGVVSCA  DILALAVRDA VVLTRGPSWS VPTGRRDGLV SSSSDAALMP TPSDSIDVLK KKFSDKGLTA QDLVILSGAH TIGQTDCQFF SYRLYNFTST GDADPTINAQ YLSQLQSLCP SGGDGTKRVA 
LDKAGETTFD ASFFRNVRDG NAVLESDQRL WGDNTTQAVV QNYAGFGDGR FDYAFTQAIV KMGNVGVKTG SNGEIRKVCS AFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no prediction from SymDB, scaffold20774 ) and RNA seq.(gba_locus_46355_iso_3_len_1352_ver_2)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGTCTA CAAATGCTCT CATGACGTTT AAGCTGATTG TTGTTTTCAT GGCCATTGTG GCCTTAGCCG ACCCTCAAGG AACGAGAGTT GGGTTTTATT ATTCCACATG TCCCAGAGCC  GAGTCCATCG TCCAATCCAC CGTTCGATCA CACTATAATT CGGATCCAAC GGTGGCACCG GGGCTGCTAA GGCTTTTCTT TCACGACTGT TTTATCGAGG CACGATTCGT CCTGCCATAT  ATACTTTATA ATTTCGTTTT GGTTTGAGTG CGTTAATATA TATGAATATT GTCTGAGCCG CTGCATAAGC GTAGTACTAA CAGGCCGGCT TATAATTGTT TGGCAGGGTT GTGATGGGTC  CATCTTAATT ACCGGTCCAT CTGCAGAGAA AAATGCTCTT ACAAATCTTG GGCTACGAGG ATTTGAAGTT ATTGAAGATG CCAAGACACA AGTAGAAGCT GCATGCCCAG GAGTTGTTTC  GTGTGCTGAC ATACTCGCTC TTGCAGTCCG GGATGCAGTA GTACTGGTAT TCATAGATAG ATAGATATAG ATATACGTGT GTGCGTGCGC GCCTTGTTTA TCAATTTTCA TTAGTCTGTT  AACTGCTTTC ATCTCCTTTT TATAACGGAA TAGGTGCATG CTGAATTTGG TAGAGCTTAC TCGTTATAAG CAAAACGATC ATTAAAAAAA ACATTAATTC TAACTCTGTA TATGATTGAT  CATATTCGTG AAATTGCAAT GCAGACAAGA GGACCAAGCT GGTCTGTACC AACGGGAAGG AGAGACGGAT TGGTCTCATC TTCGTCGGAC GCTGCACTTA TGCCAACACC ATCCGACTCC  ATCGACGTTC TGAAGAAAAA ATTCTCTGAT AAAGGCCTCA CAGCACAAGA TCTCGTAATT CTTTCTGGTG GGCAACGTTT CGAAATTAAT TATACATAGC TTTTACGCAA TACAAAATAT  ATACGCTCAA AACTAATATT ATTTTTTGTT GTTATTCAGG AGCACATACA ATTGGACAAA CTGATTGCCA ATTCTTCAGT TACCGCCTCT ACAACTTCAC ATCCACAGGG GATGCGGATC  CCACAATAAA CGCACAATAT CTGAGTCAGC TCCAATCATT GTGCCCTTCG GGTGGCGATG GTACGAAGCG TGTGGCTCTG GACAAGGCCG GCGAAACAAC ATTCGATGCG AGTTTCTTCA  GGAACGTGAG GGACGGAAAC GCCGTGCTTG AATCGGACCA AAGGCTGTGG GGTGACAACA CCACCCAAGC TGTGGTTCAA AACTATGCCG GTTTTGGGGA CGGGAGGTTC GATTATGCTT 
TCACACAGGC TATCGTTAAG ATGAGCAACG TTGGAGTGAA GACGGGCTCT GATGGCGAAA TTCGCAAAGT CTGCTCTGCA TTCAATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGTCTA CAAATGCTCT CATGACGTTT AAGCTGATTG TTGTTTTCAT GGCCATTGTG GCCTTAGCCG ACCCTCAAGG AACGAGAGTT GGGTTTTATT ATTCCACATG TCCCAGAGCC  GAGTCCATCG TCCAATCCAC CGTTCGATCA CACTATAATT CGGATCCAAC GGTGGCACCG GGGCTGCTAA GGCTTTTCTT TCACGACTGT TTTATCGAGG GTTGTGATGG GTCCATCTTA  ATTACCGGTC CATCTGCAGA GAAAAATGCT CTTACAAATC TTGGGCTACG AGGATTTGAA GTTATTGAAG ATGCCAAGAC ACAAGTAGAA GCTGCATGCC CAGGAGTTGT TTCGTGTGCT  GACATACTCG CTCTTGCAGT CCGGGATGCA GTAGTACTGA CAAGAGGACC AAGCTGGTCT GTACCAACGG GAAGGAGAGA CGGATTGGTC TCATCTTCGT CGGACGCTGC ACTTATGCCA  ACACCATCCG ACTCCATCGA CGTTCTGAAG AAAAAATTCT CTGATAAAGG CCTCACAGCA CAAGATCTCG TAATTCTTTC TGGAGCACAT ACAATTGGAC AAACTGATTG CCAATTCTTC  AGTTACCGCC TCTACAACTT CACATCCACA GGGGATGCGG ATCCCACAAT AAACGCACAA TATCTGAGTC AGCTCCAATC ATTGTGCCCT TCGGGTGGCG ATGGTACGAA GCGTGTGGCT  CTGGACAAGG CCGGCGAAAC AACATTCGAT GCGAGTTTCT TCAGGAACGT GAGGGACGGA AACGCCGTGC TTGAATCGGA CCAAAGGCTG TGGGGTGACA ACACCACCCA AGCTGTGGTT  CAAAACTATG CCGGTTTTGG GGACGGGAGG TTCGATTATG CTTTCACACA GGCTATCGTT AAGATGAGCA ACGTTGGAGT GAAGACGGGC TCTGATGGCG AAATTCGCAA AGTCTGCTCT 
GCATTCAATT GA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTTCAATCT TGCTTTGTTT TTTGTCAAGT AGAAATTGGA GCAAATCATG GAGTCTACAA ATGCTCTCAT GACGTTTAAG CTGATTGTTG TTTTCATGGC CATTGTGGCC TTAGCCGACC  CTCAAGGAAC GAGAGTTGGG TTTTATTATT CCACATGTCC CAGAGCCGAG TCCATCGTCC AATCCACCGT TCGATCACAC TATAATTCGG ATCCAACGGT GGCACCGGGG CTGCTAAGGC  TTTTCTTTCA CGACTGTTTT ATCGAGGGTT GTGATGGGTC CATCTTAATT ACCGGTCCAT CTGCAGAGAA AAATGCTCTT ACAAATCTTG GGCTACGAGG ATTTGAAGTT ATTGAAGATG  CCAAGACACA AGTAGAAGCT GCATGCCCAG GAGTTGTTTC GTGTGCTGAC ATACTCGCTC TTGCAGTCCG GGATGCAGTA GTACTGACAA GAGGACCAAG CTGGTCTGTA CCAACGGGAA  GGAGAGACGG ATTGGTCTCA TCTTCGTCGG ACGCTGCACT TATGCCAACA CCATCCGACT CCATCGACGT TCTGAAGAAA AAATTCTCTG ATAAAGGCCT CACAGCACAA GATCTCGTAA  TTCTTTCTGG AGCACATACA ATTGGACAAA CTGATTGCCA ATTCTTCAGT TACCGCCTCT ACAACTTCAC ATCCACAGGG GATGCGGATC CCACAATAAA CGCACAATAT CTGAGTCAGC  TCCAATCATT GTGCCCTTCG GGTGGCGATG GTACGAAGCG TGTGGCTCTG GACAAGGCCG GCGAAACAAC ATTCGATGCG AGTTTCTTCA GGAACGTGAG GGACGGAAAC GCCGTGCTTG  AATCGGACCA AAGGCTGTGG GGTGACAACA CCACCCAAGC TGTGGTTCAA AACTATGCCG GTTTTGGGGA CGGGAGGTTC GATTATGCTT TCACACAGGC TATCGTTAAG ATGAGCAACG  TTGGAGTGAA GACGGGCTCT GATGGCGAAA TTCGCAAAGT CTGCTCTGCA TTCAATTGAT TTCAACACCA ACGCCAAGAA GAAGCGTCCT TCAAACAAAC ACCCACCAAC AATTTTAATT  AAATGCGTCA ATTCTTGTAA TAATTAAATG TGTGGACCCG AAGAAATCAG GTTTACCATT TGACATTTGT TTCCGGAAAT AGATTTTATC GTATTTGGTC TATAGTCGTC TTCAATAAAG  GGCAATGTCC TCTGCCAGGG AAGAGTGTGT ATCACTTTCC GTTTGTTTCT TTCAATTGTA ATCAGGTCCA TCCTGAACGC TCCGAAAGAG CATAATTTAA CAGGTTCAAG TTTATGGAAG 
TTGCGTTTGT GATTAACTGA ACTTACACAA AG 

Retrieve as FASTA